; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0022981 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022981
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr11:11930123..11930611
RNA-Seq ExpressionPI0022981
SyntenyPI0022981
Gene Ontology termsNA
InterPro domainsIPR004312 - Arabidopsis retrotransposon Orf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]4.9e-0738.94Show/hide
Query:  LCD--TEFED-FRELEDATLAP-ESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDEDFYKYINEAVAKSMMDGLEEVFQT
        +CD  T  ED  + LED +L P  S     L + +DDP  K    T   A ET  PSPPK+   Q + A E +D ++++K+I     K M DG E++FQ 
Subjt:  LCD--TEFED-FRELEDATLAP-ESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDEDFYKYINEAVAKSMMDGLEEVFQT

Query:  QANLQELATKHEK
        QAN QE   + +K
Subjt:  QANLQELATKHEK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]4.5e-0835.97Show/hide
Query:  MQDLCDTEFEDFRELEDATLAPESQTTV---------FLGEPIDDPTPKENQTTLVEAGETRAPSPPKQI------ENQQNHAAEENDDED--FYKYINE
        +QDL      D       T      TT+          L + IDDP  K  Q    +A +TR PSPPKQ       + +Q  A  ++DD+D  ++K+INE
Subjt:  MQDLCDTEFEDFRELEDATLAPESQTTV---------FLGEPIDDPTPKENQTTLVEAGETRAPSPPKQI------ENQQNHAAEENDDED--FYKYINE

Query:  AVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMD
         V++ +  G E+VFQ QANLQE   +++K + DLE K D
Subjt:  AVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMD

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]1.3e-1053.85Show/hide
Query:  GETRAPSPPKQIENQQNHAAEENDDED-FYKYINEAVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMDKYHQ
        GET AP P KQI NQQ +AA E+D+ED ++K+I +   K +MDG ++VFQ Q +LQE   +HEKQI DLE K+D  +Q
Subjt:  GETRAPSPPKQIENQQNHAAEENDDED-FYKYINEAVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMDKYHQ

TYK23898.1 gag-pol [Cucumis melo var. makuwa]2.2e-0741.67Show/hide
Query:  DFRELEDATLAPESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDED-FYKYINEAVAKSMMDGLEEVFQTQANLQE
        D   +E+ATL     T     EP+DD   K  Q    + GE   PSP KQ   QQ++   E+DDED ++K+I++   K MMD LE++FQ Q++LQE
Subjt:  DFRELEDATLAPESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDED-FYKYINEAVAKSMMDGLEEVFQTQANLQE

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]4.5e-0835.97Show/hide
Query:  MQDLCDTEFEDFRELEDATLAPESQTTV---------FLGEPIDDPTPKENQTTLVEAGETRAPSPPKQI------ENQQNHAAEENDDED--FYKYINE
        +QDL      D       T      TT+          L + IDDP  K  Q    +A +TR PSPPKQ       + +Q  A  ++DD+D  ++K+INE
Subjt:  MQDLCDTEFEDFRELEDATLAPESQTTV---------FLGEPIDDPTPKENQTTLVEAGETRAPSPPKQI------ENQQNHAAEENDDED--FYKYINE

Query:  AVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMD
         V++ +  G E+VFQ QANLQE   +++K + DLE K D
Subjt:  AVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMD

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein2.4e-0738.94Show/hide
Query:  LCD--TEFED-FRELEDATLAP-ESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDEDFYKYINEAVAKSMMDGLEEVFQT
        +CD  T  ED  + LED +L P  S     L + +DDP  K    T   A ET  PSPPK+   Q + A E +D ++++K+I     K M DG E++FQ 
Subjt:  LCD--TEFED-FRELEDATLAP-ESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDEDFYKYINEAVAKSMMDGLEEVFQT

Query:  QANLQELATKHEK
        QAN QE   + +K
Subjt:  QANLQELATKHEK

A0A5A7TJU0 Uncharacterized protein2.2e-0835.97Show/hide
Query:  MQDLCDTEFEDFRELEDATLAPESQTTV---------FLGEPIDDPTPKENQTTLVEAGETRAPSPPKQI------ENQQNHAAEENDDED--FYKYINE
        +QDL      D       T      TT+          L + IDDP  K  Q    +A +TR PSPPKQ       + +Q  A  ++DD+D  ++K+INE
Subjt:  MQDLCDTEFEDFRELEDATLAPESQTTV---------FLGEPIDDPTPKENQTTLVEAGETRAPSPPKQI------ENQQNHAAEENDDED--FYKYINE

Query:  AVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMD
         V++ +  G E+VFQ QANLQE   +++K + DLE K D
Subjt:  AVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMD

A0A5A7U0L9 Uncharacterized protein6.1e-1153.85Show/hide
Query:  GETRAPSPPKQIENQQNHAAEENDDED-FYKYINEAVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMDKYHQ
        GET AP P KQI NQQ +AA E+D+ED ++K+I +   K +MDG ++VFQ Q +LQE   +HEKQI DLE K+D  +Q
Subjt:  GETRAPSPPKQIENQQNHAAEENDDED-FYKYINEAVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMDKYHQ

A0A5D3DK59 Gag-pol1.1e-0741.67Show/hide
Query:  DFRELEDATLAPESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDED-FYKYINEAVAKSMMDGLEEVFQTQANLQE
        D   +E+ATL     T     EP+DD   K  Q    + GE   PSP KQ   QQ++   E+DDED ++K+I++   K MMD LE++FQ Q++LQE
Subjt:  DFRELEDATLAPESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDED-FYKYINEAVAKSMMDGLEEVFQTQANLQE

A0A5D3E1H0 Uncharacterized protein2.2e-0835.97Show/hide
Query:  MQDLCDTEFEDFRELEDATLAPESQTTV---------FLGEPIDDPTPKENQTTLVEAGETRAPSPPKQI------ENQQNHAAEENDDED--FYKYINE
        +QDL      D       T      TT+          L + IDDP  K  Q    +A +TR PSPPKQ       + +Q  A  ++DD+D  ++K+INE
Subjt:  MQDLCDTEFEDFRELEDATLAPESQTTV---------FLGEPIDDPTPKENQTTLVEAGETRAPSPPKQI------ENQQNHAAEENDDED--FYKYINE

Query:  AVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMD
         V++ +  G E+VFQ QANLQE   +++K + DLE K D
Subjt:  AVAKSMMDGLEEVFQTQANLQELATKHEKQIGDLETKMD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCTGCGATACAGAATTTGAAGATTTCAGAGAGTTAGAGGATGCGACATTGGCACCTGAGTCGCAAACCACAGTCTTTCTTGGTGAGCCGATTGATGACCC
AACTCCCAAGGAAAATCAAACAACCCTTGTGGAAGCTGGTGAGACGCGGGCTCCTTCGCCGCCTAAGCAAATTGAAAATCAACAAAACCATGCAGCGGAAGAGAATGACG
ATGAAGATTTCTACAAGTACATCAATGAGGCAGTCGCCAAGTCAATGATGGATGGACTTGAAGAAGTCTTCCAAACCCAAGCCAATCTGCAAGAACTTGCGACGAAACAT
GAGAAGCAGATTGGGGACTTGGAAACAAAAATGGACAAATACCATCAATCGCAACACGACCAGCTAGCATCTGAAGTAGCGAGCCTGAAGGAGCAAAACAAGGCGATGGT
TACTTTGATCAAGAAGGCTTCCTCGCTGACAGGCAATACAAATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCTGCGATACAGAATTTGAAGATTTCAGAGAGTTAGAGGATGCGACATTGGCACCTGAGTCGCAAACCACAGTCTTTCTTGGTGAGCCGATTGATGACCC
AACTCCCAAGGAAAATCAAACAACCCTTGTGGAAGCTGGTGAGACGCGGGCTCCTTCGCCGCCTAAGCAAATTGAAAATCAACAAAACCATGCAGCGGAAGAGAATGACG
ATGAAGATTTCTACAAGTACATCAATGAGGCAGTCGCCAAGTCAATGATGGATGGACTTGAAGAAGTCTTCCAAACCCAAGCCAATCTGCAAGAACTTGCGACGAAACAT
GAGAAGCAGATTGGGGACTTGGAAACAAAAATGGACAAATACCATCAATCGCAACACGACCAGCTAGCATCTGAAGTAGCGAGCCTGAAGGAGCAAAACAAGGCGATGGT
TACTTTGATCAAGAAGGCTTCCTCGCTGACAGGCAATACAAATCTTTGA
Protein sequenceShow/hide protein sequence
MQDLCDTEFEDFRELEDATLAPESQTTVFLGEPIDDPTPKENQTTLVEAGETRAPSPPKQIENQQNHAAEENDDEDFYKYINEAVAKSMMDGLEEVFQTQANLQELATKH
EKQIGDLETKMDKYHQSQHDQLASEVASLKEQNKAMVTLIKKASSLTGNTNL