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PI0022983 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0022983
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionextensin-like
Genome locationchr09:4991784..4993709
RNA-Seq ExpressionPI0022983
SyntenyPI0022983
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032543.1 hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3973.24Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
        MLP   LLFL  LLLISPSS  +SA VRRLDD  TP DPTVKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ KN +CPPPP+P+FM
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM

Query:  YITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLLV
        YITGPPGDLYPID +YNAA RR    +A+A VG+ +AG+L++
Subjt:  YITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLLV

XP_004150475.1 leucine-rich repeat extensin-like protein 6 [Cucumis sativus]8.1e-5994.2Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
        MLPLKFLLFLNFLLLISPSSA+TS TVRRLDDTTTPTDP VKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPK+PNCPPPPSPSFM
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM

Query:  YITGPPGDLYPIDHNYNAAGRRSAAAAVGVVLAGLLLV
        YITGPPGDLYPID  YNAAGRRSAA  VGVVLAGLLLV
Subjt:  YITGPPGDLYPIDHNYNAAGRRSAAAAVGVVLAGLLLV

XP_008467156.1 PREDICTED: extensin-like [Cucumis melo]9.5e-6096.4Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
        MLPLKFLLFLNFLLLISPSSA+TSATVRRLDDTTTPTDP VKCAPCEQNPPSPPPP+VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM

Query:  YITGPPGDLYPIDHNYNAAGRRS-AAAAVGVVLAGLLLV
        YITGPPGDLYPID NYNAAGRRS AAAAVGVVLAGLLLV
Subjt:  YITGPPGDLYPIDHNYNAAGRRS-AAAAVGVVLAGLLLV

XP_022989990.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]8.4e-4073.1Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDT---TTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSP
        MLP   LLFL  LLLISPSS  +SA VRRLDDT    TP DPTVKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ KN +CPPPPSP
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDT---TTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSP

Query:  SFMYITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLLV
        +FMYITGPPGDLYPID NYNAA RR    +A+A +G+ +AG+L++
Subjt:  SFMYITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLLV

XP_023520933.1 extensin [Cucurbita pepo subsp. pepo]1.4e-3974.65Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPS-PPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSF
        MLP   LLFL  LLLISPSS  +SA VRRLDD  TPTDPTVKC+PCEQNPPS PPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ KN +CPPPPSP+F
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPS-PPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSF

Query:  MYITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLL
        MYITGPPGDLYPID NYNAA RR    +A+A +G+ +AG+L+
Subjt:  MYITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLL

TrEMBL top hitse value%identityAlignment
A0A0A0KPJ1 Uncharacterized protein3.9e-5994.2Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
        MLPLKFLLFLNFLLLISPSSA+TS TVRRLDDTTTPTDP VKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPK+PNCPPPPSPSFM
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM

Query:  YITGPPGDLYPIDHNYNAAGRRSAAAAVGVVLAGLLLV
        YITGPPGDLYPID  YNAAGRRSAA  VGVVLAGLLLV
Subjt:  YITGPPGDLYPIDHNYNAAGRRSAAAAVGVVLAGLLLV

A0A1S3CT22 extensin-like4.6e-6096.4Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
        MLPLKFLLFLNFLLLISPSSA+TSATVRRLDDTTTPTDP VKCAPCEQNPPSPPPP+VYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM

Query:  YITGPPGDLYPIDHNYNAAGRRS-AAAAVGVVLAGLLLV
        YITGPPGDLYPID NYNAAGRRS AAAAVGVVLAGLLLV
Subjt:  YITGPPGDLYPIDHNYNAAGRRS-AAAAVGVVLAGLLLV

A0A6J1FGG4 formin-like protein 33.2e-3774.64Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
        MLPL FLL L  LLLISPSS  T+A  RRLDD+       VKC PCEQNPPS PPP +YPSPPPPSPPPPD++PYYSPPPPKKK+ KNPNCPPPP  +FM
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM

Query:  YITGPPGDLYPIDHNYNAAGRRSAAAAVGVVLAGLLLV
        YITGPPGDLYPID N+NAAGRRS AA V ++LAGLLLV
Subjt:  YITGPPGDLYPIDHNYNAAGRRSAAAAVGVVLAGLLLV

A0A6J1GMY1 extensin9.0e-4073.24Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM
        MLP   LLFL  LLLISPSS  +SA VRRLDD  TP DPTVKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ KN +CPPPP+P+FM
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFM

Query:  YITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLLV
        YITGPPGDLYPID +YNAA RR    +A+A VG+ +AG+L++
Subjt:  YITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLLV

A0A6J1JNW0 leucine-rich repeat extensin-like protein 34.1e-4073.1Show/hide
Query:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDT---TTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSP
        MLP   LLFL  LLLISPSS  +SA VRRLDDT    TP DPTVKC+PCEQNPPSPPPP VYPSPPPPSPPPPDVV YYSPPPP KK+ KN +CPPPPSP
Subjt:  MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDT---TTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSP

Query:  SFMYITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLLV
        +FMYITGPPGDLYPID NYNAA RR    +A+A +G+ +AG+L++
Subjt:  SFMYITGPPGDLYPIDHNYNAAGRR----SAAAAVGVVLAGLLLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein2.9e-0640.83Show/hide
Query:  VTSATVRRLDDTTTPTDPTVKCAPCEQN----PPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDHNYN
        + S  +   +D++   D  V C PC QN    PPSPPPP   PSPPPPSPPPP       PP P       P  PPPP P++++ T PPGDLYPI++ Y 
Subjt:  VTSATVRRLDDTTTPTDPTVKCAPCEQN----PPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDHNYN

Query:  AAGRRSAAAAVGVVLAGLLL
        AA    + + + + + G+++
Subjt:  AAGRRSAAAAVGVVLAGLLL

AT1G23040.1 hydroxyproline-rich glycoprotein family protein4.6e-1248.39Show/hide
Query:  LLISPSSAVTSATVRRLDDTTTPTDPTVKCAP-CEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPI
        L+   SS+  S   R+LD+     DP +KC+P C QNPP P PP   PSPPPP+ PPP  +P   PPPPKK    +  CPPPP  +F+YITGPPG+LYP+
Subjt:  LLISPSSAVTSATVRRLDDTTTPTDPTVKCAP-CEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPI

Query:  DHNYNAAGRRSAAAAVGVVLAGLL
        D  + AA  +S      V L+GL+
Subjt:  DHNYNAAGRRSAAAAVGVVLAGLL

AT1G70990.1 proline-rich family protein2.1e-0945.65Show/hide
Query:  LKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQN--PPSPPPPVVYPSPPPPS---PPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPS
        L  ++FL F ++I+ S    S+T R+L++     DP +KC PC QN  PPSPPP    PSPPPPS   PPPP       PP P    PK   CPPPPS +
Subjt:  LKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQN--PPSPPPPVVYPSPPPPS---PPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPS

Query:  FMYITGPPGDLYPIDHNYNAAGRRSAAAAVGVVLAGLL
        ++Y+TGPPG+LYPID  + AA  +S      V ++GL+
Subjt:  FMYITGPPGDLYPIDHNYNAAGRRSAAAAVGVVLAGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTCTCAAATTTCTCCTTTTTCTCAATTTCCTCCTCCTCATTTCCCCTTCCTCCGCCGTCACCTCCGCTACCGTCCGCCGCCTTGACGATACCACCACCCCCAC
CGACCCCACCGTCAAGTGCGCCCCATGCGAACAAAATCCCCCGTCTCCACCGCCGCCGGTGGTCTACCCCTCACCCCCGCCGCCGTCTCCTCCGCCGCCCGATGTTGTCC
CCTACTACTCTCCCCCACCCCCCAAGAAGAAGGAGCCCAAAAACCCCAACTGCCCTCCGCCGCCGTCTCCGTCGTTCATGTACATAACTGGACCTCCTGGCGACCTCTAT
CCCATCGACCATAATTACAACGCTGCCGGGCGGAGATCCGCCGCGGCGGCGGTTGGGGTTGTTCTGGCCGGGCTTCTGTTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
GTAAAAGTAGGAAACGTATAAGGTAGATTCGAATATAGGAACTAAAATTGGACAATACATAAGAATAAAAATGGTATTAGAAAGAGAAAGAAAATGAAAAAAAAAACTAT
TCCCTTAGCTGGGAATCCAAACACTCCTTTTTCTCTCTCTCTTCAAAGTCTTCAAAGTTTTATACAGTTTCCATGCACCCATTCACTTAACTAATTTCCCACTCTTCCTT
CTCTCTAAAACAAAAAGAAAAAAAAATGCTTCCTCTCAAATTTCTCCTTTTTCTCAATTTCCTCCTCCTCATTTCCCCTTCCTCCGCCGTCACCTCCGCTACCGTCCGCC
GCCTTGACGATACCACCACCCCCACCGACCCCACCGTCAAGTGCGCCCCATGCGAACAAAATCCCCCGTCTCCACCGCCGCCGGTGGTCTACCCCTCACCCCCGCCGCCG
TCTCCTCCGCCGCCCGATGTTGTCCCCTACTACTCTCCCCCACCCCCCAAGAAGAAGGAGCCCAAAAACCCCAACTGCCCTCCGCCGCCGTCTCCGTCGTTCATGTACAT
AACTGGACCTCCTGGCGACCTCTATCCCATCGACCATAATTACAACGCTGCCGGGCGGAGATCCGCCGCGGCGGCGGTTGGGGTTGTTCTGGCCGGGCTTCTGTTGGTTT
AGAAACGGTGGGATCTCAATCGAATTTCTCGTAAGGTACGAGAAATTTTTTAATTTGGGATATTATTGTTTTAGAATTTTTATGGTTCATCATCATAATTTTCTTGTCCA
ATAATTTTGTAATTTGTACTAAATATTTAATTGTCCAGAAATTTGTGATAAGAAAAAAAAGAGAAAATTTCTGTGTTTTTGTTTAGCAATTTATTTTTCTCTCCTTTTTG
AATGAAAATATGGAAAATTAGGGCAAATTATTTTGTGCGATTATTTTCCCTTTTTGAATATGAATTAATTTGGATTATTCGAATTCAATCGCTATCGTGGCACAACCATA
TAATTGAGTTTTGTGTTGTAATAATTATACTTAAAACTGATTACATTTTATTGATTTAATTTAAAATATTCGTAGTGAATTTATTTTTTATTTTCTAGTGACACAGCCAT
GATAAATTTATCGAAATATGTCTTATTTATTTATGAGAGTGATATAACCTTGGATTATCTAGAGTCATCCATTAACAGATGAATACGAAAATTAATTTGTCATCCGGGCC
CCACTGGTTGTTAAAATGCGACTTCCCATCTTCCTACTAATTATTTATTAAATATTCCTCAACGGCGTCGTTTTCTCCAAAAGCAAAAACCTCCTTTTTTTTCCCCAAAC
CTAAAGTTTCTTACAAACCCCTTCAATCAATCCAACTATATTAATTTAACTACTTCCATTCACATAAATTTTACTATCACATACTTTAAATAAATTATTCTGATGTAATT
TTAAATGTTCTTTTTCATTTATCTCTAATCAAACATCTTAGAAATTTGAAAGATGCCGAAGTCAGTAAAGTTTTCCTTTTGAATGATCTTTTTTCAAATCGAAATTTCTG
TTTATTTGTTTAGTGGTATTTCGTTAATTTATTAAGAAGTATTTTCATGTAAAAGAAAAAGAAATCTCGCTGTTGGAATAATGTTTTGACTTATTTATTGACGTCTAAGT
TAGTGAATGGGTAAATGTTTTATGTTCGTGATTTAAGTCTCTTGTTTCTTCTAGTTTATCCTTAAAAAAAAAAAAAAGAAAAAAAAGAGCGTGTATAGAGTGGAATTAAA
ATAAATGGATCTAAAAAGTGATAGAATAAAAAAAAACGATTGTTAGTTAGTGGAATAGAAGGGATAGCACCGGCCAAAAGAAGTGGTAGAGGGCAAAAGAGTAAATTTAA
ATGTGGGGCTAACGAACGTTGTAGTGACACGTGTGGGAGTTCAAATTCCGAGGCAG
Protein sequenceShow/hide protein sequence
MLPLKFLLFLNFLLLISPSSAVTSATVRRLDDTTTPTDPTVKCAPCEQNPPSPPPPVVYPSPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLY
PIDHNYNAAGRRSAAAAVGVVLAGLLLV