| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6593155.1 U1 small nuclear ribonucleoprotein C, partial [Cucurbita argyrosperma subsp. sororia] | 8.4e-94 | 92.86 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG PGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAPIPGS PQPSSTNGAPL AP +YQANPAAPGSGGYDSFT+MAQP SESN
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESN
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| XP_004148886.1 U1 small nuclear ribonucleoprotein C [Cucumis sativus] | 3.2e-101 | 98.48 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPS+YQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
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| XP_008451425.1 PREDICTED: U1 small nuclear ribonucleoprotein C [Cucumis melo] | 5.5e-101 | 98.48 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS+YQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
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| XP_023515032.1 U1 small nuclear ribonucleoprotein C [Cucurbita pepo subsp. pepo] | 2.5e-93 | 93.37 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVNIPSRPPPPAPIPGS QPSSTNGAPL AP +YQANPAAPGSGGYDSFT+MAQP SESN
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESN
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| XP_038899936.1 U1 small nuclear ribonucleoprotein C isoform X1 [Benincasa hispida] | 1.8e-96 | 94.42 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRP+PGAPGYLP PTMPPMMAPPGAP+PGQVNIP+RPPPPAP+PGSAPQPSSTNGAPLA PS YQANPAAPGSGGY+SFT+MAQP SE NH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0K515 U1 small nuclear ribonucleoprotein C | 1.5e-101 | 98.48 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPS+YQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
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| A0A1S3BS92 U1 small nuclear ribonucleoprotein C | 2.6e-101 | 98.48 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS+YQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
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| A0A5A7UNW2 U1 small nuclear ribonucleoprotein C | 2.6e-101 | 98.48 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS+YQANPAAPGSGGYDSFTSMAQPSSESNH
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESNH
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| A0A6J1H7P8 U1 small nuclear ribonucleoprotein C | 2.6e-93 | 92.86 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAPIPGS PQ SSTNGAPL AP +YQANPAAPGSGGYDSFT+MAQP SESN
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESN
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| A0A6J1KWY5 U1 small nuclear ribonucleoprotein C | 1.6e-93 | 92.86 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESN
IRPPV PRP+PGAPGYLP PTMPPMMAPPGA +PGQVN+PSRPPPPAPIPGS QPSSTNGAPL AP +YQANPAAPGSGGYDSFT+MAQP SESN
Subjt: IRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGGYDSFTSMAQPSSESN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| C5XYW4 U1 small nuclear ribonucleoprotein C-2 | 1.7e-49 | 59.13 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGAAP
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP P
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGAAP
Query: --GLMPGIRPPVLPRP----IPGAPGYLPTPTMPP-MMAPPGAPIPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSSYQANPAA
LMPG+RPP+LP P PGAP +P P PP M PGAP PG + P PP P P P + P P+S GAP+ A P+ YQANP A
Subjt: --GLMPGIRPPVLPRP----IPGAPGYLPTPTMPP-MMAPPGAPIPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSSYQANPAA
Query: PG---SGGYDSFTSMAQPS------SESNH
P SG + + QP+ SE NH
Subjt: PG---SGGYDSFTSMAQPS------SESNH
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| C5XZK6 U1 small nuclear ribonucleoprotein C-1 | 2.5e-48 | 59.66 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGA--
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGA--
Query: -APG--LMPGIRPPVLPRP-IPGAPGYLPT---PTMPP-MMAPPGAPIPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSSYQAN
APG LMPG+RPP+LP P IPG PG PT P PP M PGAP PG + P PP P P P + P P+S GAP+ A P+ YQ N
Subjt: -APG--LMPGIRPPVLPRP-IPGAPGYLPT---PTMPP-MMAPPGAPIPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSSYQAN
Query: PAAPG---SGGYDSFTSMAQPS------SESNH
P AP SG + + QP+ SE NH
Subjt: PAAPG---SGGYDSFTSMAQPS------SESNH
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| F6HQ26 U1 small nuclear ribonucleoprotein C | 2.5e-64 | 68.98 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMP--GA
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHL+ RPRLPVLPTP MP G+
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMP--GA
Query: AP-----GLMPGIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGA---PIPGQVNIPSRPP----PPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGG
AP L+PG+RPPVLPRP+PGAPGY+P P MP MMAPPGA P+P ++P RPP PPA +PGS P+S + YQANPA P SGG
Subjt: AP-----GLMPGIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGA---PIPGQVNIPSRPP----PPAPIPGSAPQPSSTNGAPLAAPSSYQANPAAPGSGG
Query: YDSFTSMAQPSSESNH
+DSF AQ E+NH
Subjt: YDSFTSMAQPSSESNH
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| Q32PA0 U1 small nuclear ribonucleoprotein C | 3.5e-18 | 43.14 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG-AAPGLMP
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+ AAFQQ + P P +PG PG+MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG-AAPGLMP
Query: GIR---PPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPI
PP++P P PG +P P M P G +P P PP P+
Subjt: GIR---PPVLPRPIPGAPGYLPTPTMPPMMAPPGAPIPGQVNIPSRPPPPAPI
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| Q56XE4 U1 small nuclear ribonucleoprotein C | 1.0e-49 | 60.48 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMP-
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ +QQVGA +NQH+L RPR P++ PG MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMP-
Query: GIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPI-PGQVNIPSRPPPPAPIPGS-------APQPSSTNGAP-----LAAPSSYQANPAAPGSGGYDS-F
G+RPPVLPRP+ GY+P P +P MMAPPGAP+ P N RPP APIPG AP P G P L P Y NPAAP SG +++
Subjt: GIRPPVLPRPIPGAPGYLPTPTMPPMMAPPGAPI-PGQVNIPSRPPPPAPIPGS-------APQPSSTNGAP-----LAAPSSYQANPAAPGSGGYDS-F
Query: TSMAQPSSES
+ PS+ES
Subjt: TSMAQPSSES
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