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PI0023020 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023020
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr01:17310844..17311227
RNA-Seq ExpressionPI0023020
SyntenyPI0023020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]7.0e-3356.69Show/hide
Query:  MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFS
        +A NNEEWD+D F +HRGGRG+++EG+D+NV+V  QGQMTAMNNLL+ M   QVN    S  +  Q++++GC+  G  H  DACPLN E V +V++DP+S
Subjt:  MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFS

Query:  NTYNSNWRNHPNFGWRRNGSTKSRATW
        NTYN  WRNHPNF   R GST S+ TW
Subjt:  NTYNSNWRNHPNFGWRRNGSTKSRATW

KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]4.4e-1950.46Show/hide
Query:  MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFS
        + +N++E  +DD       RGR+D GMD+NV+VALQGQ+T M  LL+SMA SQV+ VG    A  Q+++M  VGCG  H TDAC LN E   +V++ P+S
Subjt:  MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFS

Query:  NTYNS-NWR
        NTYN+ N+R
Subjt:  NTYNS-NWR

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]7.5e-1950Show/hide
Query:  MASNNEEWDEDDFGNH------RGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFV
        MASN++EW ++ FG+       +G RGR ++G+D +++VALQGQ+  M N+L+SMA  QVNVV  S     Q+ +MGCVGC   H+T+ACPLNTE V ++
Subjt:  MASNNEEWDEDDFGNH------RGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFV

Query:  RNDP
        +NDP
Subjt:  RNDP

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]1.0e-2053.41Show/hide
Query:  VVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNHPNFGWRRNG
        +VALQGQ+T M+ LL+SM  +QVNVV  S H    + +M CVGC G ++TD CP NT+ + + +NDP+SNTYN  WRNH NF W   G
Subjt:  VVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNHPNFGWRRNG

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]8.3e-1852.38Show/hide
Query:  VVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNHPNFGW
        +VAL  Q+  M  LL+ M   +VN      H   Q+ ++GCVGCGG H+TD CP NTETV +V+NDP+ NTYN+ WRNH NF W
Subjt:  VVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNHPNFGW

TrEMBL top hitse value%identityAlignment
A0A5A7UTC1 Uncharacterized protein5.1e-2153.41Show/hide
Query:  VVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNHPNFGWRRNG
        +VALQGQ+T M+ LL+SM  +QVNVV  S H    + +M CVGC G ++TD CP NT+ + + +NDP+SNTYN  WRNH NF W   G
Subjt:  VVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNHPNFGWRRNG

A0A5A7VE68 Uncharacterized protein4.0e-1852.38Show/hide
Query:  VVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNHPNFGW
        +VAL  Q+  M  LL+ M   +VN      H   Q+ ++GCVGCGG H+TD CP NTETV +V+NDP+ NTYN+ WRNH NF W
Subjt:  VVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNHPNFGW

A0A5D3CC26 Uncharacterized protein3.6e-1950Show/hide
Query:  MASNNEEWDEDDFGNH------RGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFV
        MASN++EW ++ FG+       +G RGR ++G+D +++VALQGQ+  M N+L+SMA  QVNVV  S     Q+ +MGCVGC   H+T+ACPLNTE V ++
Subjt:  MASNNEEWDEDDFGNH------RGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFV

Query:  RNDP
        +NDP
Subjt:  RNDP

A0A5D3CSC7 Uncharacterized protein3.4e-3356.69Show/hide
Query:  MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFS
        +A NNEEWD+D F +HRGGRG+++EG+D+NV+V  QGQMTAMNNLL+ M   QVN    S  +  Q++++GC+  G  H  DACPLN E V +V++DP+S
Subjt:  MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFS

Query:  NTYNSNWRNHPNFGWRRNGSTKSRATW
        NTYN  WRNHPNF   R GST S+ TW
Subjt:  NTYNSNWRNHPNFGWRRNGSTKSRATW

A0A5D3D2S0 Uncharacterized protein2.1e-1950.46Show/hide
Query:  MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFS
        + +N++E  +DD       RGR+D GMD+NV+VALQGQ+T M  LL+SMA SQV+ VG    A  Q+++M  VGCG  H TDAC LN E   +V++ P+S
Subjt:  MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFS

Query:  NTYNS-NWR
        NTYN+ N+R
Subjt:  NTYNS-NWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCAACAATGAAGAATGGGATGAAGATGACTTCGGCAATCACCGAGGAGGACGAGGAAGAAGCGATGAAGGAATGGATAAGAACGTCGTTGTGGCGTTGCAAGG
ACAAATGACTGCGATGAACAATCTTCTTAGATCTATGGCAACATCCCAAGTTAATGTCGTAGGTGGCTCTGCGCACGCGGCAAATCAAATTGAGGATATGGGATGTGTGG
GATGCGGCGGTCTTCATGACACTGATGCATGCCCACTTAACACAGAAACGGTCGTGTTTGTAAGAAATGACCCTTTCTCCAACACTTACAACTCTAATTGGAGAAATCAT
CCTAACTTTGGATGGAGGAGGAACGGGTCAACAAAATCAAGGGCGACATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCAACAATGAAGAATGGGATGAAGATGACTTCGGCAATCACCGAGGAGGACGAGGAAGAAGCGATGAAGGAATGGATAAGAACGTCGTTGTGGCGTTGCAAGG
ACAAATGACTGCGATGAACAATCTTCTTAGATCTATGGCAACATCCCAAGTTAATGTCGTAGGTGGCTCTGCGCACGCGGCAAATCAAATTGAGGATATGGGATGTGTGG
GATGCGGCGGTCTTCATGACACTGATGCATGCCCACTTAACACAGAAACGGTCGTGTTTGTAAGAAATGACCCTTTCTCCAACACTTACAACTCTAATTGGAGAAATCAT
CCTAACTTTGGATGGAGGAGGAACGGGTCAACAAAATCAAGGGCGACATGGTGA
Protein sequenceShow/hide protein sequence
MASNNEEWDEDDFGNHRGGRGRSDEGMDKNVVVALQGQMTAMNNLLRSMATSQVNVVGGSAHAANQIEDMGCVGCGGLHDTDACPLNTETVVFVRNDPFSNTYNSNWRNH
PNFGWRRNGSTKSRATW