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PI0023027 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023027
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNuclear transcription factor Y subunit C-9
Genome locationchr09:2190820..2191026
RNA-Seq ExpressionPI0023027
SyntenyPI0023027
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647863.1 hypothetical protein Csa_000530 [Cucumis sativus]8.1e-2082.86Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPEK-RQPEPLNERRRNSDKEKPAPGKTG-FRFTATGADNVVFNCFSA
        MDVFIP+DYVIRRRIEKKLAAQAP K R P P ++R RNSDKEK AP KTG FRFTATGADNVVFNCFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPEK-RQPEPLNERRRNSDKEKPAPGKTG-FRFTATGADNVVFNCFSA

KAE8722511.1 Nuclear transcription factor Y subunit C-9 [Hibiscus syriacus]2.8e-0444.29Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATG--ADNVVFNCFSA
        MDVFIPE+YVIRRRIEKK A + P+K+    + +  R + + +P     G  F  +G  ++ VVF+C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATG--ADNVVFNCFSA

TrEMBL top hitse value%identityAlignment
A0A0A0KKA7 Uncharacterized protein3.9e-2082.86Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPEK-RQPEPLNERRRNSDKEKPAPGKTG-FRFTATGADNVVFNCFSA
        MDVFIP+DYVIRRRIEKKLAAQAP K R P P ++R RNSDKEK AP KTG FRFTATGADNVVFNCFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPEK-RQPEPLNERRRNSDKEKPAPGKTG-FRFTATGADNVVFNCFSA

A0A1R3IAB5 Uncharacterized protein6.7e-0448.05Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATG---------ADNVVFNCFSA
        MDVFIPE+YVIRRRIEKK AA      +  P  E  +  +KEK     + FRF +T          A+NVVF+CFSA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATG---------ADNVVFNCFSA

A0A371GD40 Uncharacterized protein (Fragment)8.8e-0445.71Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATG--ADNVVFNCFSA
        MDVFIPE++VI+RR+EKK AA A   ++P+  +  + NS  +   P    F   A+   ADNVVF C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATG--ADNVVFNCFSA

A0A6A3C387 Nuclear transcription factor Y subunit C-91.4e-0444.29Show/hide
Query:  MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATG--ADNVVFNCFSA
        MDVFIPE+YVIRRRIEKK A + P+K+    + +  R + + +P     G  F  +G  ++ VVF+C SA
Subjt:  MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATG--ADNVVFNCFSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTCTTTATTCCCGAGGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGAGAAGAGGCAGCCGGAGCCCCTCAATGAACGGCGGAG
GAATTCCGACAAGGAAAAGCCAGCTCCCGGAAAAACTGGATTCCGGTTCACCGCTACCGGCGCCGACAATGTGGTTTTCAATTGTTTCTCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTCTTTATTCCCGAGGATTACGTCATTCGCCGTCGCATCGAGAAAAAACTCGCCGCCCAAGCCCCCGAGAAGAGGCAGCCGGAGCCCCTCAATGAACGGCGGAG
GAATTCCGACAAGGAAAAGCCAGCTCCCGGAAAAACTGGATTCCGGTTCACCGCTACCGGCGCCGACAATGTGGTTTTCAATTGTTTCTCTGCTTGA
Protein sequenceShow/hide protein sequence
MDVFIPEDYVIRRRIEKKLAAQAPEKRQPEPLNERRRNSDKEKPAPGKTGFRFTATGADNVVFNCFSA