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PI0023063 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023063
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:7355407..7355691
RNA-Seq ExpressionPI0023063
SyntenyPI0023063
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025975.1 uncharacterized protein E6C27_scaffold34G002910 [Cucumis melo var. makuwa]6.8e-1761.11Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVM
        K + F+SL+Q DMT+ +YEK FTELAKY +  ++DE DKCK F EGL+ EIR PIT S +WSDFSKLV+  M
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVM

TYJ96623.1 Retrovirus-related Pol polyprotein from transposon opus [Cucumis melo var. makuwa]6.8e-1754.76Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRK
        K   FL L Q  MT+A+YEK +TEL+KYV  +I DE ++CK F+EGL+ EIRTP+T    W+DFSKLVEA ++VE    E KR+
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRK

TYK04211.1 uncharacterized protein E5676_scaffold24967G00130 [Cucumis melo var. makuwa]4.0e-1761.11Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVM
        K + F+SL+Q DMT+ +YEK FTELAKY +  ++DE DKCK F EGL+ EIR PIT S +WSDFSKLV+  M
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVM

TYK27694.1 A-kinase anchor protein 12 [Cucumis melo var. makuwa]2.6e-1650.56Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRKVQRKR
        K ++FLSL Q DM I +YE+ F ++AKY ++ ++DE++K KHFKEGL+T IR P+T+ST+W   S+LVEA M+VES   + K+  + KR
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRKVQRKR

WP_217833235.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]4.0e-1760Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVE
        K + FL+LVQ  MT+A+YEK FTELAKY + LI +E  KCK F++GL++EIRT +T ST W+DF+KLVEA M+ E
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVE

TrEMBL top hitse value%identityAlignment
A0A5A7SND8 Retrotrans_gag domain-containing protein3.3e-1761.11Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVM
        K + F+SL+Q DMT+ +YEK FTELAKY +  ++DE DKCK F EGL+ EIR PIT S +WSDFSKLV+  M
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVM

A0A5A7UNH7 Retrotrans_gag domain-containing protein1.6e-1662.32Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVE
        K + FLSL Q DMTI +YE+ FT+LAKY ++ ++DEE+KCKHF EGL+T I  P+T ST+WS FSKLVE
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVE

A0A5D3BBD8 Retrovirus-related Pol polyprotein from transposon opus3.3e-1754.76Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRK
        K   FL L Q  MT+A+YEK +TEL+KYV  +I DE ++CK F+EGL+ EIRTP+T    W+DFSKLVEA ++VE    E KR+
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRK

A0A5D3BWX9 Retrotrans_gag domain-containing protein1.9e-1761.11Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVM
        K + F+SL+Q DMT+ +YEK FTELAKY +  ++DE DKCK F EGL+ EIR PIT S +WSDFSKLV+  M
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVM

A0A5D3DW18 A-kinase anchor protein 121.2e-1650.56Show/hide
Query:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRKVQRKR
        K ++FLSL Q DM I +YE+ F ++AKY ++ ++DE++K KHFKEGL+T IR P+T+ST+W   S+LVEA M+VES   + K+  + KR
Subjt:  KEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRKVQRKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAGAAGAGAATTTTCTAAGTTTGGTGCAAGACGATATGACTATTGCAGATTATGAGAAGAACTTCACTGAGCTAGCAAAGTACGTGATAACCTTAATATTGGA
TGAGGAGGATAAGTGTAAGCATTTTAAAGAAGGTTTGAAGACAGAAATTCGAACTCCAATAACAACAAGTACGCATTGGTCAGATTTCTCTAAGTTGGTGGAGGCAGTCA
TGCAAGTTGAGTCATGGCCGAAGGAAAATAAGAGAAAAGTTCAAAGGAAGAGAGGTCGAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAAGAAGAGAATTTTCTAAGTTTGGTGCAAGACGATATGACTATTGCAGATTATGAGAAGAACTTCACTGAGCTAGCAAAGTACGTGATAACCTTAATATTGGA
TGAGGAGGATAAGTGTAAGCATTTTAAAGAAGGTTTGAAGACAGAAATTCGAACTCCAATAACAACAAGTACGCATTGGTCAGATTTCTCTAAGTTGGTGGAGGCAGTCA
TGCAAGTTGAGTCATGGCCGAAGGAAAATAAGAGAAAAGTTCAAAGGAAGAGAGGTCGAGTCTGA
Protein sequenceShow/hide protein sequence
MRKEENFLSLVQDDMTIADYEKNFTELAKYVITLILDEEDKCKHFKEGLKTEIRTPITTSTHWSDFSKLVEAVMQVESWPKENKRKVQRKRGRV