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PI0023078 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023078
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCytochrome b-c1 complex subunit 6
Genome locationchr06:9688576..9691980
RNA-Seq ExpressionPI0023078
SyntenyPI0023078
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650514.1 hypothetical protein Csa_011326 [Cucumis sativus]6.1e-4275.63Show/hide
Query:  MGSSLTSISTWEQNVGLKAIAFPLLHHCMHVFSVSRVFIFYNVEDY----LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYF
        MGSSLTSI TWEQ VGLKAIAFPL+         S +   +    Y    +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYF
Subjt:  MGSSLTSISTWEQNVGLKAIAFPLLHHCMHVFSVSRVFIFYNVEDY----LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYF

Query:  DYWSCIDKCVAQKLFTKLK
        DYWSCIDKCVA KL TKLK
Subjt:  DYWSCIDKCVAQKLFTKLK

KAG7030998.1 hypothetical protein SDJN02_05037 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-3395.65Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLFTK+K
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

XP_008456103.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo]3.0e-3397.1Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA KLFTKLK
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]6.8e-3394.2Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLFTK+K
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

XP_022983580.1 cytochrome b-c1 complex subunit 6-like [Cucurbita maxima]6.8e-3394.2Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLFTK+K
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

TrEMBL top hitse value%identityAlignment
A0A0A0L6I2 UCR_hinge domain-containing protein1.2e-5482.81Show/hide
Query:  MGDFHLFVMGSSLTSISTWEQNVGLKAIAFPLLH-----HCMHVFSVSRVFIFYNVEDYLADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG
        MG FHLF MGSSLTSI TWEQ VGLKAIAFPL+        +HVFS+  +FIF+NV+DYLADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG
Subjt:  MGDFHLFVMGSSLTSISTWEQNVGLKAIAFPLLH-----HCMHVFSVSRVFIFYNVEDYLADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG

Query:  HKHCTGQYFDYWSCIDKCVAQKLFTKLK
        HKHCTGQYFDYWSCIDKCVA KL TKLK
Subjt:  HKHCTGQYFDYWSCIDKCVAQKLFTKLK

A0A1S3C350 Cytochrome b-c1 complex subunit 61.5e-3397.1Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA KLFTKLK
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like3.3e-3394.2Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLFTK+K
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 63.3e-3394.2Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLFTK+K
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 64.3e-3395.65Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVA KLFTKLK
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 68.3e-2672.46Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        ++DEE VD K  LE +CKPKCV+ L EYQAC KR++GD+SGHKHCTGQYFDYW CIDKCVA KLF  LK
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial2.7e-3286.96Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVA KLF KLK
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

Q1ZXP3 Probable cytochrome b-c1 complex subunit 65.6e-0641.38Show/hide
Query:  LEEACKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAQKLFTKLK
        ++E C   C K    YQAC  R+   +   K +C GQ+ ++  CIDKCV  KLF +LK
Subjt:  LEEACKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAQKLFTKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial9.8e-2780.33Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        + +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein1.9e-3386.96Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK
        +AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVA KLF KLK
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFTKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein1.7e-2966.67Show/hide
Query:  GLKAIAFPLLHHCMHVFSVSRVFIFYNVEDYLADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC
        GL  +  P         S+S VF F  +   +AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Subjt:  GLKAIAFPLLHHCMHVFSVSRVFIFYNVEDYLADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein7.0e-2880.33Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        + +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein7.0e-2880.33Show/hide
Query:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        + +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATTTCCATTTATTTGTAATGGGATCAAGTTTAACGAGTATTAGTACGTGGGAACAAAACGTTGGATTGAAAGCAATTGCTTTCCCTTTGTTGCATCATTGCAT
GCATGTCTTCTCCGTATCCCGTGTCTTTATCTTTTATAATGTTGAAGATTATTTGGCGGATGAAGAGCCCGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCA
AGTGTGTGAAACCACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATT
GACAAATGTGTTGCACAAAAACTATTTACGAAACTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATTTCCATTTATTTGTAATGGGATCAAGTTTAACGAGTATTAGTACGTGGGAACAAAACGTTGGATTGAAAGCAATTGCTTTCCCTTTGTTGCATCATTGCAT
GCATGTCTTCTCCGTATCCCGTGTCTTTATCTTTTATAATGTTGAAGATTATTTGGCGGATGAAGAGCCCGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCA
AGTGTGTGAAACCACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATT
GACAAATGTGTTGCACAAAAACTATTTACGAAACTAAAGTAA
Protein sequenceShow/hide protein sequence
MGDFHLFVMGSSLTSISTWEQNVGLKAIAFPLLHHCMHVFSVSRVFIFYNVEDYLADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCI
DKCVAQKLFTKLK