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PI0023081 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023081
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr03:20996802..20997622
RNA-Seq ExpressionPI0023081
SyntenyPI0023081
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]9.7e-2438.07Show/hide
Query:  VVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPND------VETPGQEYVSHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFF
        VV  FY A +N EE   E+  K V F  +AIN LY L N+       E P         + ++ LE+I  P   W+  PT KYQL+P+ L TE SVWL F
Subjt:  VVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPND------VETPGQEYVSHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFF

Query:  IKKKIFPTCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIPGSLCNQMCLNRMITFHAHK
        IKK I PT HD+TI++E  MLLY      + N  ++    +++W++ P GA PFL   + L +K    L     V +   +C    L+R IT H +K
Subjt:  IKKKIFPTCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIPGSLCNQMCLNRMITFHAHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]5.0e-2849.66Show/hide
Query:  ISGKTVSFDAEAINNLYELPNDVET-PGQEYV--SHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTINLESAML
        +  + V F  E IN LY+LPND+   PGQ  +    E + ++ ++ I  P A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++
Subjt:  ISGKTVSFDAEAINNLYELPNDVET-PGQEYV--SHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTINLESAML

Query:  LYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVM
        LYCI  KK  NL  ++  + LSWMR PK A PF +TV+ LC+K +
Subjt:  LYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVM

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]3.6e-3445.76Show/hide
Query:  MGVVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVETPGQEYVSHEENG--RETLEDISLPRAVWEITPTG-KYQLYPHQLTTEASVWLFFI
        M VV KFY  K N  +  + I  +   F+ E IN LY  PND E  GQE V+    G  +E L+ ++ P  + E+ P   +YQLYPH LTT+A+VW+FF 
Subjt:  MGVVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVETPGQEYVSHEENG--RETLEDISLPRAVWEITPTG-KYQLYPHQLTTEASVWLFFI

Query:  KKKIFPTCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIP
        K KIFPTC+D+TI+++  ++LYCI+ KK +NLD++I  +IL+WM  PK AMPF S +E LC+K +  L       IP
Subjt:  KKKIFPTCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]5.0e-2849.66Show/hide
Query:  ISGKTVSFDAEAINNLYELPNDVET-PGQEYV--SHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTINLESAML
        +  + V F  E IN LY+LPND+   PGQ  +    E + ++ ++ I  P A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++
Subjt:  ISGKTVSFDAEAINNLYELPNDVET-PGQEYV--SHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTINLESAML

Query:  LYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVM
        LYCI  KK  NL  ++  + LSWMR PK A PF +TV+ LC+K +
Subjt:  LYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVM

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]2.2e-2345.89Show/hide
Query:  FYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVET-PGQEYVSHEENG--RETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFP
        FYAAK ++ E  V +  K VSF  E IN LY L ND+++ P Q  ++    G  R  ++ I+   A W  T T   QLYPHQLTTEA+VWL FIKKKI P
Subjt:  FYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVET-PGQEYVSHEENG--RETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFP

Query:  TCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMP
         C+D+T+ +E  +LLYC + K+  NL  ++  + L  MR  KGA P
Subjt:  TCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMP

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase2.4e-2849.66Show/hide
Query:  ISGKTVSFDAEAINNLYELPNDVET-PGQEYV--SHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTINLESAML
        +  + V F  E IN LY+LPND+   PGQ  +    E + ++ ++ I  P A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++
Subjt:  ISGKTVSFDAEAINNLYELPNDVET-PGQEYV--SHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTINLESAML

Query:  LYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVM
        LYCI  KK  NL  ++  + LSWMR PK A PF +TV+ LC+K +
Subjt:  LYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVM

A0A5A7V6M5 Gag/pol protein1.7e-3445.76Show/hide
Query:  MGVVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVETPGQEYVSHEENG--RETLEDISLPRAVWEITPTG-KYQLYPHQLTTEASVWLFFI
        M VV KFY  K N  +  + I  +   F+ E IN LY  PND E  GQE V+    G  +E L+ ++ P  + E+ P   +YQLYPH LTT+A+VW+FF 
Subjt:  MGVVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVETPGQEYVSHEENG--RETLEDISLPRAVWEITPTG-KYQLYPHQLTTEASVWLFFI

Query:  KKKIFPTCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIP
        K KIFPTC+D+TI+++  ++LYCI+ KK +NLD++I  +IL+WM  PK AMPF S +E LC+K +  L       IP
Subjt:  KKKIFPTCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIP

A0A5D3CVL7 Uncharacterized protein2.4e-2849.66Show/hide
Query:  ISGKTVSFDAEAINNLYELPNDVET-PGQEYV--SHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTINLESAML
        +  + V F  E IN LY+LPND+   PGQ  +    E + ++ ++ I  P A    TPT + QL+PHQLT EA+VWLFFIKKKIFPT HD+TI  E A++
Subjt:  ISGKTVSFDAEAINNLYELPNDVET-PGQEYV--SHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTINLESAML

Query:  LYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVM
        LYCI  KK  NL  ++  + LSWMR PK A PF +TV+ LC+K +
Subjt:  LYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVM

A0A5D3CW17 Uncharacterized protein4.7e-2438.07Show/hide
Query:  VVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPND------VETPGQEYVSHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFF
        VV  FY A +N EE   E+  K V F  +AIN LY L N+       E P         + ++ LE+I  P   W+  PT KYQL+P+ L TE SVWL F
Subjt:  VVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPND------VETPGQEYVSHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFF

Query:  IKKKIFPTCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIPGSLCNQMCLNRMITFHAHK
        IKK I PT HD+TI++E  MLLY      + N  ++    +++W++ P GA PFL   + L +K    L     V +   +C    L+R IT H +K
Subjt:  IKKKIFPTCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIPGSLCNQMCLNRMITFHAHK

A0A5D3DES7 Uncharacterized protein1.0e-2345.89Show/hide
Query:  FYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVET-PGQEYVSHEENG--RETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFP
        FYAAK ++ E  V +  K VSF  E IN LY L ND+++ P Q  ++    G  R  ++ I+   A W  T T   QLYPHQLTTEA+VWL FIKKKI P
Subjt:  FYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVET-PGQEYVSHEENG--RETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFP

Query:  TCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMP
         C+D+T+ +E  +LLYC + K+  NL  ++  + L  MR  KGA P
Subjt:  TCHDNTINLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGGTGGAGAAATTTTACGCCGCTAAACTCAATGCTGAGGAGTTTAGCGTTGAAATTAGTGGGAAAACGGTGAGCTTCGACGCGGAGGCCATCAATAATCTATA
CGAGTTACCCAATGATGTTGAAACACCTGGGCAAGAATATGTGTCTCACGAAGAAAATGGCCGTGAAACGTTGGAAGACATCTCCTTGCCTAGGGCCGTATGGGAAATCA
CGCCGACAGGGAAGTATCAACTTTATCCACACCAGCTAACCACAGAAGCAAGTGTGTGGCTCTTCTTCATCAAAAAGAAGATATTCCCTACGTGCCATGACAACACCATT
AACTTAGAGTCAGCGATGCTTCTCTATTGCATACTGACAAAGAAGCGCGTTAATCTCGACGATCTGATAGCTACATCCATTCTGTCTTGGATGCGAGCTCCCAAGGGCGC
CATGCCCTTCCTATCTACAGTCGAAGCCCTCTGTGTGAAGGTCATGTCGTTTCTATGCGCCATGAACACAGTCCCAATTCCAGGCAGCCTGTGTAATCAAATGTGTTTGA
ATCGCATGATCACCTTCCATGCCCACAAGGAAATGGAAAGGCGGTCAAAGACATTGGGTGACACAGCAACTGAAGGCGTGGCCCAGGCAGATCACAAGCGAAAAGCCCCA
GCCACCATATCAACCTCTCAACCAAAAGTCAAAAAACTAAAGATTGATGCGACGAGACAACCCCAGCCACTCAAAATCATCCACCCCTCTTCCCAGCTAACCAAAAGAAC
TCCCTCCAAAATTCCAAAAAGATTCCAGCCTCTCTCAACCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTGGTGGAGAAATTTTACGCCGCTAAACTCAATGCTGAGGAGTTTAGCGTTGAAATTAGTGGGAAAACGGTGAGCTTCGACGCGGAGGCCATCAATAATCTATA
CGAGTTACCCAATGATGTTGAAACACCTGGGCAAGAATATGTGTCTCACGAAGAAAATGGCCGTGAAACGTTGGAAGACATCTCCTTGCCTAGGGCCGTATGGGAAATCA
CGCCGACAGGGAAGTATCAACTTTATCCACACCAGCTAACCACAGAAGCAAGTGTGTGGCTCTTCTTCATCAAAAAGAAGATATTCCCTACGTGCCATGACAACACCATT
AACTTAGAGTCAGCGATGCTTCTCTATTGCATACTGACAAAGAAGCGCGTTAATCTCGACGATCTGATAGCTACATCCATTCTGTCTTGGATGCGAGCTCCCAAGGGCGC
CATGCCCTTCCTATCTACAGTCGAAGCCCTCTGTGTGAAGGTCATGTCGTTTCTATGCGCCATGAACACAGTCCCAATTCCAGGCAGCCTGTGTAATCAAATGTGTTTGA
ATCGCATGATCACCTTCCATGCCCACAAGGAAATGGAAAGGCGGTCAAAGACATTGGGTGACACAGCAACTGAAGGCGTGGCCCAGGCAGATCACAAGCGAAAAGCCCCA
GCCACCATATCAACCTCTCAACCAAAAGTCAAAAAACTAAAGATTGATGCGACGAGACAACCCCAGCCACTCAAAATCATCCACCCCTCTTCCCAGCTAACCAAAAGAAC
TCCCTCCAAAATTCCAAAAAGATTCCAGCCTCTCTCAACCACCTAG
Protein sequenceShow/hide protein sequence
MGVVEKFYAAKLNAEEFSVEISGKTVSFDAEAINNLYELPNDVETPGQEYVSHEENGRETLEDISLPRAVWEITPTGKYQLYPHQLTTEASVWLFFIKKKIFPTCHDNTI
NLESAMLLYCILTKKRVNLDDLIATSILSWMRAPKGAMPFLSTVEALCVKVMSFLCAMNTVPIPGSLCNQMCLNRMITFHAHKEMERRSKTLGDTATEGVAQADHKRKAP
ATISTSQPKVKKLKIDATRQPQPLKIIHPSSQLTKRTPSKIPKRFQPLSTT