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PI0023090 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023090
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationchr05:20702403..20702944
RNA-Seq ExpressionPI0023090
SyntenyPI0023090
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061648.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa]6.0e-4691.26Show/hide
Query:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG
        MST MNNGSDEETTRK+EPKP+SEYVNLKVNGQDGSEVYFRI KK+EL+KLMY+YCKRQELEFSTIAFL+DGHPIAGTQTAEELGLEDGDEIDAMKHH G
Subjt:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG

Query:  GGG
        GGG
Subjt:  GGG

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]4.1e-3169.9Show/hide
Query:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG
        MST M+  + E  TRK E +P + YVN+KVNGQDGSEVYFRI K+ +L+KLM  YCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG

Query:  GGG
        GGG
Subjt:  GGG

XP_031743856.1 small ubiquitin-related modifier 1-like [Cucumis sativus]7.8e-4689.32Show/hide
Query:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG
        MST+MNNG DEETTRK++PKP+SEYVNLKVNGQDGS+VYFRIFKK E+NKLM +YC+RQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG
Subjt:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG

Query:  GGG
        GGG
Subjt:  GGG

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]9.5e-3677.36Show/hide
Query:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG
        MS    N SDEET RK E KPDSEYVNLKVNGQDGSEVYFRIFK+ +L KLM +YCKRQ LE  TIAFL+DGH IAGTQTAEEL +EDGDEIDAMKHH G
Subjt:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG

Query:  GG-GAI
        G  GAI
Subjt:  GG-GAI

XP_038888535.1 small ubiquitin-related modifier 1-like isoform X2 [Benincasa hispida]1.9e-3173.58Show/hide
Query:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG
        MS    N SDEET RK E KPDSEYVNLK    DGSEVYFRIFK+ +L KLM +YCKRQ LE  TIAFL+DGH IAGTQTAEEL +EDGDEIDAMKHH G
Subjt:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG

Query:  GG-GAI
        G  GAI
Subjt:  GG-GAI

TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 12.9e-4691.26Show/hide
Query:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG
        MST MNNGSDEETTRK+EPKP+SEYVNLKVNGQDGSEVYFRI KK+EL+KLMY+YCKRQELEFSTIAFL+DGHPIAGTQTAEELGLEDGDEIDAMKHH G
Subjt:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG

Query:  GGG
        GGG
Subjt:  GGG

A0A6J1D1W9 small ubiquitin-related modifier 1-like1.0e-2767.02Show/hide
Query:  EETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGGGA
        EE+TRK E +PD EYVN+KVNGQDGSEVYFR+ KK +L KLM +YC+RQ  +   +AFL+DGH I G QT E+L L+DGDEIDAM HH GGGGA
Subjt:  EETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGGGA

A0A6J1GLF8 Small ubiquitin-related modifier2.5e-2968.27Show/hide
Query:  MSTVMNNGSDEETTRKSEPKP-DSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHC
        MST M+  + E   RK E +P +  YVN+KVNGQDGSEVYFRI K+ +L+KLM AYCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGD+IDAMKHH 
Subjt:  MSTVMNNGSDEETTRKSEPKP-DSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHC

Query:  GGGG
        GGGG
Subjt:  GGGG

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X22.0e-3169.9Show/hide
Query:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG
        MST M+  + E  TRK E +P + YVN+KVNGQDGSEVYFRI K+ +L+KLM  YCKRQ LE  TIAFL+DGH IAG QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCG

Query:  GGG
        GGG
Subjt:  GGG

A9NN85 Small ubiquitin-related modifier4.2e-2154.37Show/hide
Query:  MSTVMNNGSDEETTRKSEPKP--DSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHH
        MS V N G+   T ++ E KP     ++NLKV GQDG+EV+FRI +  +L KLM AYC RQ ++F++IAFL DG  + G QT EEL +EDGDEIDAM H 
Subjt:  MSTVMNNGSDEETTRKSEPKP--DSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHH

Query:  CGG
         GG
Subjt:  CGG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt33.0e-1646.59Show/hide
Query:  TRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG
        T + + KP +E++NLKV GQD +EV+F+I K  E +KLM  YC RQ    +++ FL+DG  I   QT  EL +EDGD+I+A+    GG
Subjt:  TRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG

P55852 Small ubiquitin-related modifier 12.6e-2053.49Show/hide
Query:  EPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGGG
        +P     ++NLKV GQDG+EV+FRI +  +L KLM AYC RQ ++ ++IAFL DG  +   QT +EL +EDGDEIDAM H  GG G
Subjt:  EPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGGG

P55857 Small ubiquitin-related modifier 17.6e-2049.47Show/hide
Query:  NGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG
        + + EE  + +  +    ++NLKV GQDG+EV+FRI +  +L KLM AYC RQ ++ + IAFL DG  + G QT +EL +EDGDEIDAM H  GG
Subjt:  NGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG

Q6GPW2 Small ubiquitin-related modifier 2-B4.8e-1448.75Show/hide
Query:  DSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG
        +++++NLKV GQDGS V F+I +   LNKLM AYC+RQ L    I F  DG PI  T T  +L +ED D ID  +   GG
Subjt:  DSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG

Q9FLP6 Small ubiquitin-related modifier 21.1e-2155.56Show/hide
Query:  TRKSEPKPD-SEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGG
        T + + KPD   ++NLKV GQDG+EV+FRI +  +L KLM AYC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  TRKSEPKPD-SEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 11.9e-2153.49Show/hide
Query:  EPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGGG
        +P     ++NLKV GQDG+EV+FRI +  +L KLM AYC RQ ++ ++IAFL DG  +   QT +EL +EDGDEIDAM H  GG G
Subjt:  EPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGGG

AT5G55160.1 small ubiquitin-like modifier 27.6e-2355.56Show/hide
Query:  TRKSEPKPD-SEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGG
        T + + KPD   ++NLKV GQDG+EV+FRI +  +L KLM AYC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  TRKSEPKPD-SEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGG

AT5G55160.2 small ubiquitin-like modifier 24.6e-2048.54Show/hide
Query:  TRKSEPKPD-SEYVNLKVNGQ-------------DGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHC
        T + + KPD   ++NLKV GQ             DG+EV+FRI +  +L KLM AYC RQ ++F++IAFL DG  +   QT +EL +EDGDEIDAM H  
Subjt:  TRKSEPKPD-SEYVNLKVNGQ-------------DGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHC

Query:  GGG
        GGG
Subjt:  GGG

AT5G55170.1 small ubiquitin-like modifier 33.8e-1443.3Show/hide
Query:  MNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG
        M+N  D+    K   +    +V LKV  QDG EV F+  K A L KLMY YC R+ L+    AF+ +G  I G +T +EL +EDGD IDA +   GG
Subjt:  MNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG

AT5G55856.1 Ubiquitin-like superfamily protein4.9e-1447.13Show/hide
Query:  SEPKP--DSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG
        S+ KP   S ++ +KV  QD   VYFRI +  EL K+M+AY  +  +E ST+ FL DG+ I   QT  ELGLED DEI+A     GG
Subjt:  SEPKP--DSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACAGTGATGAACAACGGCAGCGATGAAGAAACAACCCGAAAATCCGAACCAAAACCCGATTCGGAGTATGTCAACCTCAAAGTGAATGGCCAGGATGGGAGTGA
AGTGTATTTCAGGATTTTTAAGAAAGCCGAACTCAATAAACTCATGTATGCTTACTGTAAAAGACAAGAGTTAGAGTTCAGTACCATTGCTTTTCTGATGGACGGCCATC
CCATTGCTGGAACCCAAACCGCCGAAGAGCTGGGGTTGGAAGATGGAGATGAAATTGATGCCATGAAACACCACTGTGGCGGCGGGGGAGCAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACAGTGATGAACAACGGCAGCGATGAAGAAACAACCCGAAAATCCGAACCAAAACCCGATTCGGAGTATGTCAACCTCAAAGTGAATGGCCAGGATGGGAGTGA
AGTGTATTTCAGGATTTTTAAGAAAGCCGAACTCAATAAACTCATGTATGCTTACTGTAAAAGACAAGAGTTAGAGTTCAGTACCATTGCTTTTCTGATGGACGGCCATC
CCATTGCTGGAACCCAAACCGCCGAAGAGCTGGGGTTGGAAGATGGAGATGAAATTGATGCCATGAAACACCACTGTGGCGGCGGGGGAGCAATCTGA
Protein sequenceShow/hide protein sequence
MSTVMNNGSDEETTRKSEPKPDSEYVNLKVNGQDGSEVYFRIFKKAELNKLMYAYCKRQELEFSTIAFLMDGHPIAGTQTAEELGLEDGDEIDAMKHHCGGGGAI