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PI0023093 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023093
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr12:15721433..15721965
RNA-Seq ExpressionPI0023093
SyntenyPI0023093
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037108.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]3.7e-3180.85Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNL
        +MTSN AES+NSVFKDLREL VATML SIRDVLQKWF+ERSKAA   KS LT WAEN+LRLEHEKSR LLVDPIS TEY+V D NQQFIVKLN+
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNL

XP_011654398.1 uncharacterized protein LOC105435382 [Cucumis sativus]4.4e-3259.35Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR
        MMT+N +ES+NSV K+ R L+VA++L+ IR+ LQKWFH+R +A+ + K+ LTSWAE++LR +HE+SRS  V PI+  EY VM G++Q IVKLNLGSCS R
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR

Query:  VWNVEETPHSHVLVVLRMLNLDT
        VW+  E P SH LVVL MLNL++
Subjt:  VWNVEETPHSHVLVVLRMLNLDT

XP_038896390.1 uncharacterized protein LOC120084653 [Benincasa hispida]5.0e-2856.03Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR
        MMT N +E +NSV KD R L VA++L++IR +LQKWFH+R KA+ +  + LT WA+N+L  +HE+SRS +V PI   EY VMDG+ QF+VKLN GSCS R
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR

Query:  VWNVEETPHSHVLVVL
        VW+ E+ P SH L +L
Subjt:  VWNVEETPHSHVLVVL

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]4.4e-3257.38Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR
        MMT+N +E +N V K+ R L VA++L++IR +LQKWFH+R KA+ +  + LT WAEN+L  +HE+SRS ++ PI I EY VMDG++QF+VKLN  SCS +
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR

Query:  VWNVEETPHSHVLVVLRMLNLD
        VW+ EE P SHVLVVLR+LN+D
Subjt:  VWNVEETPHSHVLVVLRMLNLD

XP_038904248.1 uncharacterized protein LOC120090597 [Benincasa hispida]4.9e-3155.74Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR
        MMT+N +E +NSV K+ R L VA++L++IR +L+ WFH+R KA+F+  + LT WAEN+L  +HE+SRS +V PI   +Y VMDG++QF+VKLNLGSCS R
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR

Query:  VWNVEETPHSHVLVVLRMLNLD
        VW+ EE   SH LV+L +LN+D
Subjt:  VWNVEETPHSHVLVVLRMLNLD

TrEMBL top hitse value%identityAlignment
A0A5A7SVW4 Uncharacterized protein2.1e-2780.23Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQ
        MMTSN AESL+SVFKDLREL VATML SIRDVLQKWF+ RSKAA   K+ LTSWAEN+L LEHEKSR LLVDPIS TEY+V DGNQ
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQ

A0A5A7T2U4 Protein FAR1-RELATED SEQUENCE 4-like1.8e-3180.85Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNL
        +MTSN AES+NSVFKDLREL VATML SIRDVLQKWF+ERSKAA   KS LT WAEN+LRLEHEKSR LLVDPIS TEY+V D NQQFIVKLN+
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNL

A0A5A7V9D5 SWIM-type domain-containing protein4.1e-2871.28Show/hide
Query:  QKW----FHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYRVWNVEETPHSHVLVVLRMLNLDT
        +KW     H RSKAA   KS LTSWAEN+LRLE EKSR LLVDPIS TEY+V DGNQQFIVKLN+G CS RVW++EE P +H L VLRMLNLDT
Subjt:  QKW----FHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYRVWNVEETPHSHVLVVLRMLNLDT

A0A5D3B9S0 Uncharacterized protein2.1e-2780.23Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQ
        MMTSN AESL+SVFKDLREL VATML SIRDVLQKWF+ RSKAA   K+ LTSWAEN+L LEHEKSR LLVDPIS TEY+V DGNQ
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQ

A0A5D3DJR8 MuDR family transposase2.7e-2750.41Show/hide
Query:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR
        MMT+N +ESLN+V K+ R+L VA +L+SIR +LQ WF++R K A   ++ LTSWAE  LR++H+ SRS  V+ I+  E++V+DG +QFIV+L+  SC+ R
Subjt:  MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYR

Query:  VWNVEETPHSHVLVVLRMLNLDT
        VW+++E P +H L VLR  N++T
Subjt:  VWNVEETPHSHVLVVLRMLNLDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACATCAAATTCTGCAGAAAGTTTAAATTCAGTGTTTAAAGATCTTAGAGAACTACTTGTGGCTACGATGCTTAATTCAATTAGAGATGTATTGCAAAAGTGGTT
TCATGAACGAAGTAAAGCTGCATTTGCAACGAAGAGTCGTTTGACTTCTTGGGCTGAGAATGTTTTGCGTTTAGAACATGAAAAGTCAAGAAGTTTATTGGTCGATCCAA
TTAGTATCACTGAATACAAAGTTATGGATGGAAATCAACAGTTTATTGTCAAGTTAAACTTGGGATCTTGTAGCTATCGAGTATGGAATGTTGAGGAAACTCCACATTCA
CATGTGCTTGTTGTTTTACGAATGCTTAATTTAGATACATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGACATCAAATTCTGCAGAAAGTTTAAATTCAGTGTTTAAAGATCTTAGAGAACTACTTGTGGCTACGATGCTTAATTCAATTAGAGATGTATTGCAAAAGTGGTT
TCATGAACGAAGTAAAGCTGCATTTGCAACGAAGAGTCGTTTGACTTCTTGGGCTGAGAATGTTTTGCGTTTAGAACATGAAAAGTCAAGAAGTTTATTGGTCGATCCAA
TTAGTATCACTGAATACAAAGTTATGGATGGAAATCAACAGTTTATTGTCAAGTTAAACTTGGGATCTTGTAGCTATCGAGTATGGAATGTTGAGGAAACTCCACATTCA
CATGTGCTTGTTGTTTTACGAATGCTTAATTTAGATACATAG
Protein sequenceShow/hide protein sequence
MMTSNSAESLNSVFKDLRELLVATMLNSIRDVLQKWFHERSKAAFATKSRLTSWAENVLRLEHEKSRSLLVDPISITEYKVMDGNQQFIVKLNLGSCSYRVWNVEETPHS
HVLVVLRMLNLDT