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PI0023114 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023114
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr01:13778354..13779028
RNA-Seq ExpressionPI0023114
SyntenyPI0023114
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]2.3e-1053.03Show/hide
Query:  KTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLT
        K+  FN EAIN LY  P D E P    + +  +R A EAL+ IAW GA + +T TGKY LYPHQLT
Subjt:  KTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLT

KAA0050753.1 hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa]3.0e-1047.95Show/hide
Query:  VTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLTKR
        V   GK++ FN EAIN LY+LP D + P Q  + +  +R AREAL  I W G    +TLT  Y LYPH+LT +
Subjt:  VTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLTKR

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]1.2e-1150.68Show/hide
Query:  VTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLTKR
        V   GK++ FN EAIN LY+LP D E P Q  + +  +R AREAL  I W G    +TLTG Y LYPH+LT +
Subjt:  VTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLTKR

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]9.6e-0953.12Show/hide
Query:  FNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV-TLTGKYQLYPHQLTK
        FN E IN+LY  PND E  GQE V   T+ +A+EAL V+AWPG   +V  +  +YQLYPH  TK
Subjt:  FNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV-TLTGKYQLYPHQLTK

TYK05842.1 gag/pol protein [Cucumis melo var. makuwa]4.3e-0952.24Show/hide
Query:  FNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV-TLTGKYQLYPHQLTKRRA
        FN E IN+LY  PND E  GQE V   T+ +A+EAL V+AWPG   +V  +  +YQLYPH  TK  A
Subjt:  FNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV-TLTGKYQLYPHQLTKRRA

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein1.1e-1053.03Show/hide
Query:  KTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLT
        K+  FN EAIN LY  P D E P    + +  +R A EAL+ IAW GA + +T TGKY LYPHQLT
Subjt:  KTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLT

A0A5A7U4E3 Uncharacterized protein1.4e-1047.95Show/hide
Query:  VTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLTKR
        V   GK++ FN EAIN LY+LP D + P Q  + +  +R AREAL  I W G    +TLT  Y LYPH+LT +
Subjt:  VTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLTKR

A0A5A7URT6 Uncharacterized protein5.9e-1250.68Show/hide
Query:  VTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLTKR
        V   GK++ FN EAIN LY+LP D E P Q  + +  +R AREAL  I W G    +TLTG Y LYPH+LT +
Subjt:  VTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKVTLTGKYQLYPHQLTKR

A0A5A7V6M5 Gag/pol protein4.7e-0953.12Show/hide
Query:  FNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV-TLTGKYQLYPHQLTK
        FN E IN+LY  PND E  GQE V   T+ +A+EAL V+AWPG   +V  +  +YQLYPH  TK
Subjt:  FNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV-TLTGKYQLYPHQLTK

A0A5D3C3P6 Gag/pol protein2.1e-0952.24Show/hide
Query:  FNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV-TLTGKYQLYPHQLTKRRA
        FN E IN+LY  PND E  GQE V   T+ +A+EAL V+AWPG   +V  +  +YQLYPH  TK  A
Subjt:  FNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV-TLTGKYQLYPHQLTKRRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCGGACCTGAGCGAGCAAATGGCGGAGCTCCCCGCGAAGATGAAAGCGTTGGAGCCTGAGAGGAACCTCGAAGTTATTGCTGAAGAACTCGAGGATGAGCTGGA
GGCGATGAGCCCAATTGATCAAGGGCCACCGCCAAGAAAACCAAGTGAGGTCACCAGACCTGGCAAGACAGTAAGCTTCAACGCGGAGGCCATCAACGATTTATACGAGC
TGCCCAACGATGTTGAAATGCCTGGGCAAGAATACGTGGTTAGTCCCACAAGAAGAATGGCCCGTGAAGCGTTGGACGTAATCGCCTGGCCTGGGGCCGCATGGAAAGTA
ACGTTGACAGGGAAGTATCAACTCTATCCTCACCAACTAACCAAGAGGCGAGCGTGTGGCTTTTCTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCGGACCTGAGCGAGCAAATGGCGGAGCTCCCCGCGAAGATGAAAGCGTTGGAGCCTGAGAGGAACCTCGAAGTTATTGCTGAAGAACTCGAGGATGAGCTGGA
GGCGATGAGCCCAATTGATCAAGGGCCACCGCCAAGAAAACCAAGTGAGGTCACCAGACCTGGCAAGACAGTAAGCTTCAACGCGGAGGCCATCAACGATTTATACGAGC
TGCCCAACGATGTTGAAATGCCTGGGCAAGAATACGTGGTTAGTCCCACAAGAAGAATGGCCCGTGAAGCGTTGGACGTAATCGCCTGGCCTGGGGCCGCATGGAAAGTA
ACGTTGACAGGGAAGTATCAACTCTATCCTCACCAACTAACCAAGAGGCGAGCGTGTGGCTTTTCTTCATAA
Protein sequenceShow/hide protein sequence
MLADLSEQMAELPAKMKALEPERNLEVIAEELEDELEAMSPIDQGPPPRKPSEVTRPGKTVSFNAEAINDLYELPNDVEMPGQEYVVSPTRRMAREALDVIAWPGAAWKV
TLTGKYQLYPHQLTKRRACGFSS