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PI0023162 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023162
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr04:23038237..23040930
RNA-Seq ExpressionPI0023162
SyntenyPI0023162
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037547.1 uncharacterized protein E6C27_scaffold277G001660 [Cucumis melo var. makuwa]2.4e-0748.57Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT
        +TELS YV  +I ++ + CR+ ERGLR EIRTPVT +A  + FS L+ T LRVEQS+ +++   E  + T
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT
KAA0040283.1 uncharacterized protein E6C27_scaffold2379G00150 [Cucumis melo var. makuwa]1.1e-0747.14Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT
        + ELS+Y   ++ +K + CR+ ERGL  EIRTPVTV+A  + FS L+ TTLRVEQS+ +++   E  + T
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT
KAA0045363.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-0740Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI
        +TELS+Y   +I +K + CR+ ERGLR EIRTPVT +A  + FS L+ T LRVEQS+ +++   E  + T     F  ++Q R      + +  ++ FK 
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI

Query:  RSSGK
        RS G+
Subjt:  RSSGK
KAA0046124.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-0739.05Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI
        +TELS+Y   ++ ++ + CR+ ERGLR EIRTPVT +A  + FS L+ T LRVE+S+ +++   E  + T     FS ++Q R      + +  ++ FK 
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI

Query:  RSSGK
        RS GK
Subjt:  RSSGK
KAA0053322.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]1.1e-0739.05Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI
        +TELS+Y   +I ++ + CR++ERGLR EIRTPVT +A  + FS L+ T LRVEQS+++++   E  + T     F  ++Q R      + +  ++ FK 
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI

Query:  RSSGK
        RS G+
Subjt:  RSSGK
TrEMBL top hitse value%identityAlignment
A0A5A7TB27 Uncharacterized protein5.3e-0847.14Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT
        + ELS+Y   ++ +K + CR+ ERGL  EIRTPVTV+A  + FS L+ TTLRVEQS+ +++   E  + T
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT
A0A5A7TP97 Reverse transcriptase6.9e-0840Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI
        +TELS+Y   +I +K + CR+ ERGLR EIRTPVT +A  + FS L+ T LRVEQS+ +++   E  + T     F  ++Q R      + +  ++ FK 
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI

Query:  RSSGK
        RS G+
Subjt:  RSSGK
A0A5A7TSU6 DNA/RNA polymerases superfamily protein5.3e-0839.05Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI
        +TELS+Y   ++ ++ + CR+ ERGLR EIRTPVT +A  + FS L+ T LRVE+S+ +++   E  + T     FS ++Q R      + +  ++ FK 
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI

Query:  RSSGK
        RS GK
Subjt:  RSSGK
A0A5A7UC49 Reverse transcriptase5.3e-0839.05Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI
        +TELS+Y   +I ++ + CR++ERGLR EIRTPVT +A  + FS L+ T LRVEQS+++++   E  + T     F  ++Q R      + +  ++ FK 
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNT-----FSKKQQMRDQKHCILIVFRKRGFKI

Query:  RSSGK
        RS G+
Subjt:  RSSGK
A0A5A7UKH5 Uncharacterized protein1.2e-0750.82Show/hide
Query:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDE
        +TELS+Y   ++ +K + CR+ ERGLR EIRTPVT +A    FS L+ T LRVEQS+ +++
Subjt:  FTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACCGAGTTGTCAAAGTATGTCGGTTCAATGATAGGTACGAAAGAGGAAATGTGTAGGAAGCTCGAAAGGGGTTTACGTAAGGAGATTCGCACACCAGTGACGGT
GGTAGCAGCAAGATCATACTTTTCTCACTTAATAAACACAACTTTACGAGTTGAACAGAGCTTGGAGCAGGATGAACCTAAGGAGGAGCAAAGGAAGAACACTTTTTCTA
AAAAGCAACAAATGCGAGATCAGAAACACTGTATTCTAATAGTATTTAGGAAAAGAGGTTTTAAGATTCGCTCTAGTGGAAAAAAAATCACTAGACGGTTAATCAACCAA
GAGTTACAACAACTAGTGGATAAGGAACAAGTGTTGTCAAGCAAAATGGAGTTGTCGGTAGACCACGACAACAAGGAAAGATGTATGCTCTATGACAACAGGAAGTTGAA
GATACACCGAACATCATTACTGGAAACTAAGGTTGGAACAGGAGACGCTATTTCAGCTCTTGCAATAGGAGATGTTAAGTTGTTTTTTAGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTACCGAGTTGTCAAAGTATGTCGGTTCAATGATAGGTACGAAAGAGGAAATGTGTAGGAAGCTCGAAAGGGGTTTACGTAAGGAGATTCGCACACCAGTGACGGT
GGTAGCAGCAAGATCATACTTTTCTCACTTAATAAACACAACTTTACGAGTTGAACAGAGCTTGGAGCAGGATGAACCTAAGGAGGAGCAAAGGAAGAACACTTTTTCTA
AAAAGCAACAAATGCGAGATCAGAAACACTGTATTCTAATAGTATTTAGGAAAAGAGGTTTTAAGATTCGCTCTAGTGGAAAAAAAATCACTAGACGGTTAATCAACCAA
GAGTTACAACAACTAGTGGATAAGGAACAAGTGTTGTCAAGCAAAATGGAGTTGTCGGTAGACCACGACAACAAGGAAAGATGTATGCTCTATGACAACAGGAAGTTGAA
GATACACCGAACATCATTACTGGAAACTAAGGTTGGAACAGGAGACGCTATTTCAGCTCTTGCAATAGGAGATGTTAAGTTGTTTTTTAGAAATTGA
Protein sequenceShow/hide protein sequence
MFTELSKYVGSMIGTKEEMCRKLERGLRKEIRTPVTVVAARSYFSHLINTTLRVEQSLEQDEPKEEQRKNTFSKKQQMRDQKHCILIVFRKRGFKIRSSGKKITRRLINQ
ELQQLVDKEQVLSSKMELSVDHDNKERCMLYDNRKLKIHRTSLLETKVGTGDAISALAIGDVKLFFRN