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PI0023168 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023168
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:19055556..19055801
RNA-Seq ExpressionPI0023168
SyntenyPI0023168
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039592.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-1767.95Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSI
        M +++ E A+ EM+RK NLLM V+EERDHEI ALRDQM+  +  ESS+TP VKA+DK KAVLQENQ+QQSIFV SLSI
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSI

KAA0066644.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.1e-1866.67Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL
        M +V+ E  + EM+RK N LM V+EERDHEI AL+DQ+KA E  ESS+TP VKANDKGK VLQENQ QQS+ VTSLS+Q+L
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL

TYK04088.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.1e-1866.67Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL
        M +V+ E  + EM+RK N LM V+EERDHEI AL+DQ+KA E  ESS+TP VKANDKGK VLQENQ QQS+ VTSLS+Q+L
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL

TYK14284.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.0e-1765.43Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL
        M +V+ E  + EM+RK N LM VV+ERDHEIVAL+ Q+KA E  ESS+TP VKANDKGK VLQEN +QQS++VTSLS+Q+L
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL

TYK23197.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-1768.35Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQ
        + +V+ EVA++EM+RK N LM +VEERDHEI AL+DQMKA E  ESS+T VVK +DKGK VLQENQ QQSIFV SLS+Q
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQ

TrEMBL top hitse value%identityAlignment
A0A5A7VH30 Ty3-gypsy retrotransposon protein2.0e-1866.67Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL
        M +V+ E  + EM+RK N LM V+EERDHEI AL+DQ+KA E  ESS+TP VKANDKGK VLQENQ QQS+ VTSLS+Q+L
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL

A0A5D3BYI9 Ty3-gypsy retrotransposon protein2.0e-1866.67Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL
        M +V+ E  + EM+RK N LM V+EERDHEI AL+DQ+KA E  ESS+TP VKANDKGK VLQENQ QQS+ VTSLS+Q+L
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL

A0A5D3CTB7 Ty3-gypsy retrotransposon protein9.7e-1865.43Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL
        M +V+ E  + EM+RK N LM VV+ERDHEIVAL+ Q+KA E  ESS+TP VKANDKGK VLQEN +QQS++VTSLS+Q+L
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL

A0A5D3DEZ5 Ty3-gypsy retrotransposon protein1.3e-1765.43Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL
        MT+V+ E  + EM+RK N LM VVEERDHEI  L+DQMKA E  ESS+TPVVKA++KGKAVLQENQ ++SI + SLS+Q+L
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL

A0A5D3DHQ0 Ty3-gypsy retrotransposon protein5.7e-1868.35Show/hide
Query:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQ
        + +V+ EVA++EM+RK N LM +VEERDHEI AL+DQMKA E  ESS+T VVK +DKGK VLQENQ QQSIFV SLS+Q
Subjt:  MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATGTATCAACTGAGGTAGCCATAATAGAGATGAAGAGGAAAACAAATCTCTTAATGAATGTTGTCGAGGAACGGGATCATGAAATTGTTGCCTTGAGAGATCA
AATGAAGGCTAGTGAAATTGAAGAGTCAAGTCAAACTCCTGTTGTCAAAGCTAATGATAAAGGAAAAGCTGTGTTGCAGGAAAACCAAGTGCAACAATCCATCTTTGTCA
CATCCTTGTCGATCCAGAAACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATGTATCAACTGAGGTAGCCATAATAGAGATGAAGAGGAAAACAAATCTCTTAATGAATGTTGTCGAGGAACGGGATCATGAAATTGTTGCCTTGAGAGATCA
AATGAAGGCTAGTGAAATTGAAGAGTCAAGTCAAACTCCTGTTGTCAAAGCTAATGATAAAGGAAAAGCTGTGTTGCAGGAAAACCAAGTGCAACAATCCATCTTTGTCA
CATCCTTGTCGATCCAGAAACTATAA
Protein sequenceShow/hide protein sequence
MTNVSTEVAIIEMKRKTNLLMNVVEERDHEIVALRDQMKASEIEESSQTPVVKANDKGKAVLQENQVQQSIFVTSLSIQKL