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PI0023175 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023175
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:5458623..5459306
RNA-Seq ExpressionPI0023175
SyntenyPI0023175
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.9e-6673.37Show/hide
Query:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYIT+    +G  RSNN R RDVADD QQVLDICNNN+R+ME+IH MY +PIVPP ++  RV+VEE ELDEVYHNVEE+ P TQ Q+QTGYGSPM+M+P
Subjt:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSR
        TFG  YCD EV T YYDSGVGPSSSYMDV PSTSYMHGH H  D GEHNEYLY+EAPT+V D QEYQQ+ ENQEEL Q RVQSR
Subjt:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSR

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.1e-6078.29Show/hide
Query:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR +AA+GHLRSNN R RDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+  RVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYL
        TFGA Y DSEVGTGYYD+G+ PSS YMDV PS  YMHGH  G   GEHN+YL
Subjt:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.3e-7777.5Show/hide
Query:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  AA+G  RSNN R RDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH
        TF A YCD EVG GYYD+GVGPSSSY+DV PSTSYMHGH  G   GEHNEYLY+EAP DV D QEYQQ+ ENQE+  Q RVQSR RQPTRNRRRPGCGTH
Subjt:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.4e-7277.96Show/hide
Query:  RSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPTFGARYCDSEVGTG
        RSNN R RDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQSQTGYGSPM M+PTF A YCD EVG G
Subjt:  RSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPTFGARYCDSEVGTG

Query:  YYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH
        YYD+GVGPSSSY+DV PSTSYMHGH  G   GEHNEYLY+EAP DV D QEYQQ+ ENQE+  Q RVQSR RQPTRNRR PGCGTH
Subjt:  YYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.3e-7877Show/hide
Query:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  A +GHLRSNN R RDV +DPQQVLDICNNNERYME IH +YD+PIVPPPV+ ER RVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH
        TFGA YCDSEV  GYYD+ VGP SSYMDV PSTSYM+GHG G   GEHNEYLY+EAPTDV D QEYQQ+ +NQE+  Q RVQSR RQP RNR+  GCGTH
Subjt:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.8e-6673.37Show/hide
Query:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYIT+    +G  RSNN R RDVADD QQVLDICNNN+R+ME+IH MY +PIVPP ++  RV+VEE ELDEVYHNVEE+ P TQ Q+QTGYGSPM+M+P
Subjt:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSR
        TFG  YCD EV T YYDSGVGPSSSYMDV PSTSYMHGH H  D GEHNEYLY+EAPT+V D QEYQQ+ ENQEEL Q RVQSR
Subjt:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSR

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.9e-6078.29Show/hide
Query:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR +AA+GHLRSNN R RDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+  RVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYL
        TFGA Y DSEVGTGYYD+G+ PSS YMDV PS  YMHGH  G   GEHN+YL
Subjt:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.5e-7777.5Show/hide
Query:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  AA+G  RSNN R RDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH
        TF A YCD EVG GYYD+GVGPSSSY+DV PSTSYMHGH  G   GEHNEYLY+EAP DV D QEYQQ+ ENQE+  Q RVQSR RQPTRNRRRPGCGTH
Subjt:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X21.2e-7277.96Show/hide
Query:  RSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPTFGARYCDSEVGTG
        RSNN R RDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQSQTGYGSPM M+PTF A YCD EVG G
Subjt:  RSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPTFGARYCDSEVGTG

Query:  YYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH
        YYD+GVGPSSSY+DV PSTSYMHGH  G   GEHNEYLY+EAP DV D QEYQQ+ ENQE+  Q RVQSR RQPTRNRR PGCGTH
Subjt:  YYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.1e-7877Show/hide
Query:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  A +GHLRSNN R RDV +DPQQVLDICNNNERYME IH +YD+PIVPPPV+ ER RVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH
        TFGA YCDSEV  GYYD+ VGP SSYMDV PSTSYM+GHG G   GEHNEYLY+EAPTDV D QEYQQ+ +NQE+  Q RVQSR RQP RNR+  GCGTH
Subjt:  TFGARYCDSEVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGCTATGGGTCATCTGAGATCGAACAACAGAAGATTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGAACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAG
TTTACCATAACGTAGAAGAAGTACCTCCAATGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATCCCAACATTTGGAGCAAGATATTGTGATTCT
GAGGTCGGTACAGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCAGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGACCGCGG
AGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAAAATCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGA
GTCGACTACGACAACCAACCCGAAATCGACGACGTCCGGGTTGTGGGACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGCTATGGGTCATCTGAGATCGAACAACAGAAGATTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGAACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAG
TTTACCATAACGTAGAAGAAGTACCTCCAATGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATCCCAACATTTGGAGCAAGATATTGTGATTCT
GAGGTCGGTACAGGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCAGACCATCAACTTCTTACATGCATGGACATGGACACGGACGCGACCGCGG
AGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAAAATCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGA
GTCGACTACGACAACCAACCCGAAATCGACGACGTCCGGGTTGTGGGACACATTGA
Protein sequenceShow/hide protein sequence
MRLYITRSKAAMGHLRSNNRRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPPMTQTQSQTGYGSPMMMIPTFGARYCDS
EVGTGYYDSGVGPSSSYMDVRPSTSYMHGHGHGRDRGEHNEYLYYEAPTDVPDPQEYQQKSENQEELGQPRVQSRLRQPTRNRRRPGCGTH