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PI0023192 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023192
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAP-5 complex subunit beta-1
Genome locationchr10:205432..205845
RNA-Seq ExpressionPI0023192
SyntenyPI0023192
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016197 - endosomal transport (biological process)
GO:0030119 - AP-type membrane coat adaptor complex (cellular component)
InterPro domainsIPR038741 - AP-5 complex subunit beta-1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067550.1 AP-5 complex subunit beta-1 [Cucumis melo var. makuwa]3.0e-5889.05Show/hide
Query:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL
        M +HPAMYATVLKFSSSASFGPIPSRHIPF L ESPGDED   SRGVSSLDIVPIQNGYGK+ERFKALVAVELEPREPTPG VDVSIEST  SGQIIRG 
Subjt:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL

Query:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        LESITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

XP_008466491.1 PREDICTED: uncharacterized protein LOC103503880 [Cucumis melo]3.0e-5889.05Show/hide
Query:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL
        M +HPAMYATVLKFSSSASFGPIPSRHIPF L ESPGDED   SRGVSSLDIVPIQNGYGK+ERFKALVAVELEPREPTPG VDVSIEST  SGQIIRG 
Subjt:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL

Query:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        LESITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

XP_011654553.1 uncharacterized protein LOC101219595 [Cucumis sativus]3.5e-6291.24Show/hide
Query:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL
        MD+HPAMYATVLKFSSSASFGPIPSRHIPF L E+PGDEDAPSSRGVSSLDIVPIQNGYGK++RFKALVAVELEPREPTPG VDVSIEST RSGQIIRG 
Subjt:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL

Query:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        LESITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

XP_023521414.1 uncharacterized protein LOC111785232 isoform X2 [Cucurbita pepo subsp. pepo]3.1e-5586.03Show/hide
Query:  DSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGLL
        D+HPAMYATVLKFSSSA FG IPSRHIPF L ES GDE +PS R VSSLDIVP+QNGYGK ERFKALVAVELEPREPTPGLVDVSIEST  SGQIIRG L
Subjt:  DSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGLL

Query:  ESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        +SITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  ESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

XP_038876028.1 uncharacterized protein LOC120068363 [Benincasa hispida]3.2e-6089.05Show/hide
Query:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL
        MD+HPAMYATVLKFSSSASFGPIP+RHIPF L ESPGDE +PSSRGVSSLDIVPIQNGYGK ERFKALVAVELEPREPTPGLVDVSIE+T  SGQIIRG 
Subjt:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL

Query:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        L+SITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

TrEMBL top hitse value%identityAlignment
A0A0A0KJ67 AP-5 complex subunit beta-11.7e-6291.24Show/hide
Query:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL
        MD+HPAMYATVLKFSSSASFGPIPSRHIPF L E+PGDEDAPSSRGVSSLDIVPIQNGYGK++RFKALVAVELEPREPTPG VDVSIEST RSGQIIRG 
Subjt:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL

Query:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        LESITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

A0A1S3CRD3 AP-5 complex subunit beta-11.5e-5889.05Show/hide
Query:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL
        M +HPAMYATVLKFSSSASFGPIPSRHIPF L ESPGDED   SRGVSSLDIVPIQNGYGK+ERFKALVAVELEPREPTPG VDVSIEST  SGQIIRG 
Subjt:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL

Query:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        LESITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

A0A5D3BDX5 AP-5 complex subunit beta-11.5e-5889.05Show/hide
Query:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL
        M +HPAMYATVLKFSSSASFGPIPSRHIPF L ESPGDED   SRGVSSLDIVPIQNGYGK+ERFKALVAVELEPREPTPG VDVSIEST  SGQIIRG 
Subjt:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGL

Query:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        LESITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  LESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

A0A6J1GY96 AP-5 complex subunit beta-11.7e-5485.29Show/hide
Query:  DSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGLL
        D+HPAMYATVLKFSSSA FG IPSRHIPF L ES GDE +PS R VSSLDIVP+QNGYGK ERFKALVAVELEPREPTPGLVDVSIEST  SGQIIRG L
Subjt:  DSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGLL

Query:  ESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        +SITVGLEDLFLKAVV SD+SMDEIPGY S+LFNAL
Subjt:  ESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

A0A6J1JGZ1 AP-5 complex subunit beta-11.7e-5484.56Show/hide
Query:  DSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGLL
        D+HPAMYATVLKFSS A FG IPSRHIPF L ES GDE +PS R  SSLDIVP+QNGYGK ERFKALVAVELEPREPTPGLVDVSIEST  SGQIIRG L
Subjt:  DSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGLL

Query:  ESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        +SITVGLEDLFLKAVV SD+SMDEIPGYYS+LFNAL
Subjt:  ESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19870.1 unknown protein8.0e-3354.29Show/hide
Query:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKER---FKALVAVELEPREPTPGLVDVSIESTTRSGQII
        +DS PA++ATVLKFSSSA +G IPS  IPF L E   + + P+     SLDIV ++N   ++E+     A V VELEPREPTPGLV+VS+E+   +GQ+I
Subjt:  MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKER---FKALVAVELEPREPTPGLVDVSIESTTRSGQII

Query:  RGLLESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL
        +G LES+ VG+ED+FLKA+   D   D IP YYS+LFNAL
Subjt:  RGLLESITVGLEDLFLKAVVSSDLSMDEIPGYYSNLFNAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTCATCCTGCAATGTATGCAACTGTGCTCAAGTTTTCTTCTTCTGCATCATTTGGTCCTATTCCATCCCGTCATATACCTTTTACTTTGAGAGAGTCTCCTGG
GGATGAAGATGCTCCTAGTTCAAGGGGGGTCTCCTCATTGGACATCGTTCCTATACAGAATGGTTATGGGAAAAAAGAAAGATTTAAGGCTCTGGTAGCAGTTGAATTGG
AACCAAGGGAGCCCACACCAGGACTTGTTGATGTCTCAATTGAATCTACGACACGAAGTGGCCAAATCATTCGTGGCCTGCTTGAGAGTATCACGGTTGGACTTGAAGAT
TTGTTTCTTAAAGCTGTTGTTTCGTCAGACTTATCAATGGATGAAATCCCTGGTTATTATTCTAATTTATTCAATGCTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTCATCCTGCAATGTATGCAACTGTGCTCAAGTTTTCTTCTTCTGCATCATTTGGTCCTATTCCATCCCGTCATATACCTTTTACTTTGAGAGAGTCTCCTGG
GGATGAAGATGCTCCTAGTTCAAGGGGGGTCTCCTCATTGGACATCGTTCCTATACAGAATGGTTATGGGAAAAAAGAAAGATTTAAGGCTCTGGTAGCAGTTGAATTGG
AACCAAGGGAGCCCACACCAGGACTTGTTGATGTCTCAATTGAATCTACGACACGAAGTGGCCAAATCATTCGTGGCCTGCTTGAGAGTATCACGGTTGGACTTGAAGAT
TTGTTTCTTAAAGCTGTTGTTTCGTCAGACTTATCAATGGATGAAATCCCTGGTTATTATTCTAATTTATTCAATGCTTTATGA
Protein sequenceShow/hide protein sequence
MDSHPAMYATVLKFSSSASFGPIPSRHIPFTLRESPGDEDAPSSRGVSSLDIVPIQNGYGKKERFKALVAVELEPREPTPGLVDVSIESTTRSGQIIRGLLESITVGLED
LFLKAVVSSDLSMDEIPGYYSNLFNAL