; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023220 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023220
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationchr10:21992399..21995713
RNA-Seq ExpressionPI0023220
SyntenyPI0023220
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034761.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa]4.5e-15394.33Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQ----------------DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        SAAAAAAASTSNATTPRSFETTSSHQ                DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQ----------------DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

XP_004142483.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus]1.1e-156100Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

XP_008446964.1 PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]3.3e-15699.65Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

XP_022956997.1 protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata]1.1e-13086.62Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   QPPP N  PD+++DR+R+ +NLKRTQDFGFGKG+SLI G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        N+G D+ VKGD GDGS+ VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    GSSGSSSAGAKRP+VLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        + AAAAAASTSNATTPRSFETTSSHQDASFKKSLPG V+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD K
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

XP_038892899.1 protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]5.5e-14393.31Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLL ATPCLPP QP P N T DDVTDR+R+ +NLKRTQDFGFGKG+SL+ G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NN SDE VKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        S AAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI+SGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

TrEMBL top hitse value%identityAlignment
A0A0A0KWX6 Uncharacterized protein5.5e-157100Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

A0A1S3BFS5 protein LATERAL ROOT PRIMORDIUM 11.6e-15699.65Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

A0A5D3CCT8 Protein LATERAL ROOT PRIMORDIUM 12.2e-15394.33Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPG
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQ----------------DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        SAAAAAAASTSNATTPRSFETTSSHQ                DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQ----------------DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

A0A6J1CEG6 protein LATERAL ROOT PRIMORDIUM 13.7e-12987.59Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGP
        MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG 
Subjt:  MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGP

Query:  GNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
        GNN  DE V+GDAGD SM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  GNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSAAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        QS AAAAA     ASTSNATTPRSFET+S+HQDASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG DDK
Subjt:  QSAAAAAA-----ASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

A0A6J1GXY1 protein LATERAL ROOT PRIMORDIUM 1-like5.2e-13186.62Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG
        MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   QPPP N  PD+++DR+R+ +NLKRTQDFGFGKG+SLI G G
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPG

Query:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ
        N+G D+ VKGD GDGS+ VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    GSSGSSSAGAKRP+VLIPSQ
Subjt:  NNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ

Query:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        + AAAAAASTSNATTPRSFETTSSHQDASFKKSLPG V+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD K
Subjt:  SAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 12.3e-2739.13Show/hide
Query:  DFGFGKGES-----LIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
        D G G G S     + AG         V   +G G ++ C+DCGN+AKK+C++ RCRTCCK RG  C THVKSTWVPAA+RRERQ  +           G
Subjt:  DFGFGKGES-----LIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG

Query:  GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG
         ++ +++   KR R     +  +A++  ST   +     E              P  VR  AVF+C ++++I   E +LAYQA V+IGGHVFKG LYDQG
Subjt:  GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG

Query:  ADDKMHS
         + + ++
Subjt:  ADDKMHS

O65517 Protein SHI RELATED SEQUENCE 22.0e-3147.93Show/hide
Query:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSF
        CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG GG SGS  AG       IP +        ++S++  P S 
Subjt:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSF

Query:  ETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGADDKMHS
               +ASF    PG V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +    S
Subjt:  ETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGADDKMHS

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 12.5e-5045.36Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        +   Q     A + TS + T P+SFET+SS QD    +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

Q9M2U4 Protein SHI RELATED SEQUENCE 67.2e-2944.85Show/hide
Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRS
        VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                      SSS   ++ ++ I  QS+   +            
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRS

Query:  FETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGAD
          TT+S Q+  F++ LPG + APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G D
Subjt:  FETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGAD

Q9SD40 Protein SHI RELATED SEQUENCE 11.6e-2837.08Show/hide
Query:  HQQTQII--SSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVK-GDAGD
        H Q +I+     H   L L SS A G+ VG                 P+NH   D++                   GE+  AG G   +   ++ G +G 
Subjt:  HQQTQII--SSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVK-GDAGD

Query:  GSMAV-CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNA
        GS  V C+DCGN+AKK+C + RCRTCCK RG  CSTHV+STWVPAA+RRERQ  +      T    G S        KR R  +P+ S++       S+ 
Subjt:  GSMAV-CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNA

Query:  TTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG
                 S  +  +F    P  V + AVFRC RV+++  GE E AYQ  V+IGGH+FKG LYD G
Subjt:  TTPRSFETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG

Arabidopsis top hitse value%identityAlignment
AT4G36260.1 Lateral root primordium (LRP) protein-related1.4e-3247.93Show/hide
Query:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSF
        CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG GG SGS  AG       IP +        ++S++  P S 
Subjt:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSF

Query:  ETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGADDKMHS
               +ASF    PG V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +    S
Subjt:  ETTSSHQDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGADDKMHS

AT5G12330.1 Lateral root primordium (LRP) protein-related1.8e-5145.36Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        +   Q     A + TS + T P+SFET+SS QD    +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

AT5G12330.2 Lateral root primordium (LRP) protein-related1.8e-5145.36Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        +   Q     A + TS + T P+SFET+SS QD    +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK

AT5G12330.3 Lateral root primordium (LRP) protein-related3.0e-3041.67Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQDASFKKSL
        +   Q     A + TS + T P+SFET+SS Q  SF  SL
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQDASFKKSL

AT5G12330.4 Lateral root primordium (LRP) protein-related1.8e-5145.36Show/hide
Query:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL
        M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A         P  N    D+       R +  +N   TQ   F      
Subjt:  MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESL

Query:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV
          G  +N S       +G    A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        A+   GSS S+S+G K+PR+
Subjt:  IAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRV

Query:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK
        +   Q     A + TS + T P+SFET+SS QD    +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYDQG + K
Subjt:  LIPSQSAAAAAAASTSNATT-PRSFETTSSHQD-ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACGCCCTCTTCTCTTCACCAGCAGACCCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTCCCCTCCTC
CACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGCCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATC
GTACTCGCACTTTCGATAATCTTAAGAGAACCCAAGATTTTGGCTTTGGAAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGC
GACGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTG
CTCTACGCACGTGAAGAGCACGTGGGTACCAGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCG
GTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCCGCTTCCACTTCCAATGCCACCACTCCCCGGAGCTTTGAA
ACAACCTCTAGCCATCAGGATGCAAGCTTCAAAAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGG
TGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTTCTTTATGATCAAGGAGCTGATGACAAAATGCATTCCCATCTATTTCACATCTCCA
TTTGGACAGTGGTAACCACCACAGGGAATAGACATTCCTTCTCTTCATTCTTCTCCAATTCTTCCTCTGTTCACTCCTCCTGA
mRNA sequenceShow/hide mRNA sequence
CCAAAGCCAAATACATTATATATTTATTATATTTATAGTTATTCCCTTTCTTCCTCACAAACCTAAAATAAACTTTGTCACACCACAGTTTCAAGAATCATTCATTCCAA
TTTCCATTTTCCAATTTCCAATTTCCATTTCCATTTCCTTTTCCATTCCACTCATCTTCATCTTCATCTTCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCATCTTCATCTTCATCATCATCATCAACATCATCATCTACTTCTTCTTCTTCTTCCTTGATCTCATCTCATCAGTCATCTGTTACTGTGAAATGAGACAGAATTCCAC
TTCATTACACACAATTGCTTTTGCTCTAATAAAATTTTCTTCTTTTTCCCAGCACTGCATAATCCCCACATCCCATAACAACTAACTCTCTCTCTCTCTCTCTCTCTCTC
TCTCAATTTCATCATAAACACACCCTCTTGGCTCTTTCTATCTCAACCTCTCTTCTTCTAATTTCATCTCATCACCTTTTTTTTTTTTTTTTGAGCTTTTTTTCAATCAA
CAAAATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACGCCCTCTTCTCTTCACCAGCAGACCCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTCCCCT
CCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGCCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACC
GATCGTACTCGCACTTTCGATAATCTTAAGAGAACCCAAGATTTTGGCTTTGGAAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAA
AGGCGACGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATC
ATTGCTCTACGCACGTGAAGAGCACGTGGGTACCAGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCT
TCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCTAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCCGCCGCTTCCACTTCCAATGCCACCACTCCCCGGAGCTT
TGAAACAACCTCTAGCCATCAGGATGCAAGCTTCAAAAAGTCATTACCAGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTG
AAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTTCTTTATGATCAAGGAGCTGATGACAAAATGCATTCCCATCTATTTCACATC
TCCATTTGGACAGTGGTAACCACCACAGGGAATAGACATTCCTTCTCTTCATTCTTCTCCAATTCTTCCTCTGTTCACTCCTCCTGAAAACTCGGTCTCGACCACTTGAA
AAATATGATATCTCTGCTAGATTTCCGAGGTCTGTTATGTTATCTGTAAGTTTTATATTGTTGTTATCATGGTGGTACTACAATGAATCTTGCACTAAATAGAACACGAA
AGTGCATAGTTGTAATAGAAATTTTCTGTTCTATAGTTGTTCTAGCCATAAGCTAGGTTTAGTGTAAGATTTATCAAGTTCAAAGATAGTTGGATATTGATCTTCTGTAT
ATGCTTAGAAGATGTGTAACTTTCATCTATCCAAATATCTGCTGAAACAAGTTAGCTTGTCTTATTTCATAGCAGCTGTATTATATGTTGGGATACAAGAGTTTAATCTC
TTATTTTACTGTCTATCTCAAAAGTTTTACAAAACAAATGAAATCGTTCATCTGAGTATGTTCTTGCGAAATGCCACGATGGTGGAACAGGCAAAATGTATGTAATGCTT
CCTCTTTCTACATTACTATCATTTGTCTTCATCTTTGAACATTTTCAGTGATTTGGATCTTCTCCCATTATGAGAGGGGTTTTATTAAATGAAAGTCATTTATTTGATTG
AGACGAGTTTGATGGTGAATATGTAGGGAAAACCTGAATAAGTAAAGTCGGACCCCACATGCACGAACAATATAAGCAGAAGATGAAAGTAAGTGAAGTGTAGTTCCATT
TTCATCACATTTTTAGCAAAAAACGAAAGCAGAGCAATGGAGATGAACACTAAAAACTGAAAAGTGGGAAGAAAGAGCAAAGCAGTGTAAGAATTACCAAAATTTGAAAA
GAGTTGAAAGAAAAAAAGAAGCATTGATGATTGATGGAGAAGAGAAAAGGATGAATATGAGAACAGTATCAATTGGGACTCAGTTGTTAAAGGAGAGGGATTTGCTTCTT
CCCAGATGACATTAACAAAAAGGTATGCATTAAAAGGGATGAACAAAATGAATAGGTGAGACCAATACCCCCCACCCCCTTTTTGTCTTTTCATATAGGAATTGTTAGGC
CTAAGTGTATGTGTAGGAGATTGAATCCAATTACATATCATTGCAAATGCCAAAAACAGATGTGACAAAGCAGTGGTATGGCAAAAACATACATTTTTATTATAAAGATT
ACGGGGTTTCAACTTGAATATATATGCTTTTGTAGGAAGGAAAAAA
Protein sequenceShow/hide protein sequence
MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKG
DAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFE
TTSSHQDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDKMHSHLFHISIWTVVTTTGNRHSFSSFFSNSSSVHSS