; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023228 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023228
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiontrafficking protein particle complex subunit 6B
Genome locationchr02:1225855..1228446
RNA-Seq ExpressionPI0023228
SyntenyPI0023228
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0043087 - regulation of GTPase activity (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007194 - Transport protein particle (TRAPP) component
IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily
IPR037992 - TRAPP complex, Trs33 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135644.1 trafficking protein particle complex subunit 6B isoform X2 [Cucumis sativus]1.4e-9298.83Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQ+ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_008450727.1 PREDICTED: trafficking protein particle complex subunit 6B isoform X1 [Cucumis melo]2.6e-9197.14Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ

Query:  DNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        DNRFRWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  DNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_008450728.1 PREDICTED: trafficking protein particle complex subunit 6B isoform X2 [Cucumis melo]4.7e-9399.42Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_031736214.1 trafficking protein particle complex subunit 6B isoform X1 [Cucumis sativus]9.9e-9196.02Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE-----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE     RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE-----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVL

Query:  QDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        QDNRFRWLTRMSVDPQ+ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  QDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_038878648.1 trafficking protein particle complex subunit 6B [Benincasa hispida]4.7e-9399.42Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

TrEMBL top hitse value%identityAlignment
A0A0A0M1M8 Uncharacterized protein6.7e-9398.83Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQ+ESQDNSADGENK AQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A1S3BP90 trafficking protein particle complex subunit 6B isoform X22.3e-9399.42Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A1S3BQW9 trafficking protein particle complex subunit 6B isoform X11.3e-9197.14Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE    RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSE----RYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQ

Query:  DNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        DNRFRWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  DNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A5D3CG65 Trafficking protein particle complex subunit 6B isoform X22.3e-9399.42Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDPQ+ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A6J1I0Q5 trafficking protein particle complex subunit 6B2.4e-9097.66Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVD-PQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        RWLTRMSVD PQ ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Subjt:  RWLTRMSVD-PQSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

SwissProt top hitse value%identityAlignment
F1QMV3 Trafficking protein particle complex subunit 6b4.1e-3147.41Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF
        ++E +G++VG  L ER+T + PRF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT++S   Q               +     L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG++RGALSN+G+   V+A++S +PAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q32L78 Trafficking protein particle complex subunit 6B1.1e-3149.63Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF
        ++E +G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q78XR0 Trafficking protein particle complex subunit 6A3.7e-2440.3Show/hide
Query:  IEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFP
        +E +G++VG  L ER  +E P F + L+A+KF+C+D W+ +F+K +D L+TNH+GT+VLQDN F  L  M   PQ               +     L F 
Subjt:  IEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYFP

Query:  CGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        CG++ GAL  LG    V+A +++LPAC F V I+
Subjt:  CGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q86SZ2 Trafficking protein particle complex subunit 6B1.1e-3149.63Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF
        ++E +G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q9D289 Trafficking protein particle complex subunit 6B5.4e-3148.15Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF
        ++E++G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR L ++S   Q               +  S +L F
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPQSESQDNSADGENKAAQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Arabidopsis top hitse value%identityAlignment
AT3G05000.1 Transport protein particle (TRAPP) component2.4e-8283.82Show/hide
Query:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVAESCVD++L EMV+ Y  RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRF+DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+F
Subjt:  MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPQS--ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWL+R+S+DP S  E+QD S  GE+KAAQA SM+LYFPCGIIRG LSNLGIPCAVSADIS+LP CSFV+R+KA
Subjt:  RWLTRMSVDPQS--ESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGAGGTAGCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGCCGCCCGTCGCAT
CGAGGCAATTGGTTATCAGGTTGGCCATCAGCTCTCTGAACGGTATACGATGGAGCGGCCTCGGTTCACTGATCATCTTGAAGCAATCAAATTTATCTGCAAGGACTTCT
GGTCTGAACTCTTCAAAAAGCAAATAGACAACTTAAAAACAAATCATAGAGGTACCTTTGTCTTGCAAGATAATCGATTTCGCTGGCTTACTCGCATGTCGGTGGATCCT
CAAAGTGAATCACAAGATAATTCTGCAGATGGTGAAAACAAGGCAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATAAGAGGTGCTCTTTCAAATTT
GGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTTCATTTGTTGTTCGTATAAAAGCCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTCATCCAACTAACCGGCTTATGTACAGGAAAATTTAATATTACGGGGGCTAAATTGCAAATCATCCATTCGTACGACATGTCGTCATTTAGTAGTTGAATCTAGACT
GAGGGCGGAATCAAGGCAGTGACTCGATCGATCTTCTCTCATCCTCAGTCTTGTTCTTGATTTCCTTCCCAATTCCATCGCTTCTTCAGTTTTACAATTCCACTTTGATC
GAAGGTAAACACATGGGGAGAGAGGTAGCAGAGAGTTGCGTTGACAGTCTATTGACGGAAATGGTTTCCACTTATTGCCATCGATTCTACGCCAATAAGCCGGAGCTAGC
CGCCCGTCGCATCGAGGCAATTGGTTATCAGGTTGGCCATCAGCTCTCTGAACGGTATACGATGGAGCGGCCTCGGTTCACTGATCATCTTGAAGCAATCAAATTTATCT
GCAAGGACTTCTGGTCTGAACTCTTCAAAAAGCAAATAGACAACTTAAAAACAAATCATAGAGGTACCTTTGTCTTGCAAGATAATCGATTTCGCTGGCTTACTCGCATG
TCGGTGGATCCTCAAAGTGAATCACAAGATAATTCTGCAGATGGTGAAAACAAGGCAGCTCAAGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATAAGAGGTGC
TCTTTCAAATTTGGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCAGCATGTTCATTTGTTGTTCGTATAAAAGCCTGATGAGAAGTGTATCAAAAAGTAG
AGATTTTATCTTTGGGATATGAAGACTTGGTAGATCCTTAACACCACCCTCCTGTTGCAATCCTTTCTGTTCTGTTTCCTTTTTTGCTTTCTCTATTTCTTTATCTTCTC
CTAGTTCATGAAACTCTTAGCACAAAAATCTGCTGGGCAAACGTGTGTGTATGTATGAAAGTCTATAGCGATTATTTTTCAGAATTTCAAGATTGTAGAGATACGTTGAG
GTTTATTTTATAATACACCATTTGGGAGGATTGGTTCA
Protein sequenceShow/hide protein sequence
MGREVAESCVDSLLTEMVSTYCHRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDP
QSESQDNSADGENKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA