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PI0023235 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023235
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:12790105..12792419
RNA-Seq ExpressionPI0023235
SyntenyPI0023235
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]2.6e-3571.68Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFSIAL F NMVHLYV VS +D  I+LN+E R VEEYVDV+ E DA PVC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D+++EHDPIIVP+
Subjt:  DSVREHDPIIVPV

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]2.2e-3471.68Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFSIALSF NMVHLYV VS +D  I+LN+E R VEEYVDV+ E DA  VC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D ++EHDPIIVP+
Subjt:  DSVREHDPIIVPV

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.8e-3571.68Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFSIAL F NMVHLYV VS +D  I+LN+E R VEEYVDV+ E DA PVC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D ++EHDPIIVP+
Subjt:  DSVREHDPIIVPV

TYK01570.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.9e-3570.8Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFS+AL F NMVHLYV VS +D  I+LN+E R VEEYVDV+ E DA PVC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D+++EHDPIIVP+
Subjt:  DSVREHDPIIVPV

TYK23115.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]4.5e-3571.68Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFSIAL F NMVHLYV VS +DL I+LN+E + VEEYVDVD E DA PVC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D ++E DPIIVP+
Subjt:  DSVREHDPIIVPV

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein1.3e-3571.68Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFSIAL F NMVHLYV VS +D  I+LN+E R VEEYVDV+ E DA PVC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D+++EHDPIIVP+
Subjt:  DSVREHDPIIVPV

A0A5A7T1X8 SWIM-type domain-containing protein1.1e-3471.68Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFSIALSF NMVHLYV VS +D  I+LN+E R VEEYVDV+ E DA  VC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D ++EHDPIIVP+
Subjt:  DSVREHDPIIVPV

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.8e-3571.68Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFSIAL F NMVHLYV VS +D  I+LN+E R VEEYVDV+ E DA PVC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D ++EHDPIIVP+
Subjt:  DSVREHDPIIVPV

A0A5D3BR52 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.8e-3570.8Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFS+AL F NMVHLYV VS +D  I+LN+E R VEEYVDV+ E DA PVC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D+++EHDPIIVP+
Subjt:  DSVREHDPIIVPV

A0A5D3DHR2 GATA zinc finger domain-containing protein 10-like isoform X22.2e-3571.68Show/hide
Query:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV
        MNTMFSIAL F NMVHLYV VS +DL I+LN+E + VEEYVDVD E DA PVC EEEMVA N+Y +FR ETDDEFEEM+FDG E++ PSNTF +LDMNAV
Subjt:  MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAV

Query:  DSVREHDPIIVPV
        D ++E DPIIVP+
Subjt:  DSVREHDPIIVPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACCATGTTTTCAATTGCACTGTCGTTTCTGAACATGGTGCATTTGTACGTGATTGTGAGTAGGATAGATTTGGGCATCGACTTAAATATAGAATCACGACCAGT
TGAAGAATATGTTGATGTTGATCTGGAGTTAGATGCACAACCAGTGTGCGATGAAGAAGAAATGGTAGCTAATAATGACTATAGAGACTTTAGAATAGAAACTGATGATG
AATTCGAAGAGATGGAATTTGATGGGCGTGAACATAAATTTCCCTCAAATACATTTATTGAGTTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTATA
GTCCCAGTGGGCCCTTTCGTTTACCGTGCAACCCACCTTCTTCCCATTCTCCATCCCACACAAAACCCTAGCGTCGCCGCCATCATCGTCGACCACCGTGCTCCGTCGAA
CACTACTCGTAGACGAAGCCAAGCCGAGGAGCCCGGCCAACCGCGTCGTTCCATTCCGTCCCGAGTCGAAGAAGAGCGCAAGCCAGCCGTGTCGTTCTATTCTGTCCCGA
ATCGAGGAGTCCGCACAAACCAGTGTCCCGAGCCGAGCAGTTCACGCTACCTGTCCGTCTGCCATCCTTCGCGCGAGCCGTGCCTAGCCGAGGAGTCTTCCATCCAAGCC
GAGCCGTCCGTCTGCGTGCCATCCAAGCCGCACCGTCGTCCACCTGCTCCTCTAGCCGAGCCGCGTGCTGTCCTTCCTCTCAGTGTGACCCATTCAAGCTATTTGGGGCT
ATTTGTGGTAAGTGTGGATGGGTTTAGTATGCCCATCACTACAAACCTTTGGGTTTTTCATGGTTTGGCATTGGATCTAATTATGGCCTTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACCATGTTTTCAATTGCACTGTCGTTTCTGAACATGGTGCATTTGTACGTGATTGTGAGTAGGATAGATTTGGGCATCGACTTAAATATAGAATCACGACCAGT
TGAAGAATATGTTGATGTTGATCTGGAGTTAGATGCACAACCAGTGTGCGATGAAGAAGAAATGGTAGCTAATAATGACTATAGAGACTTTAGAATAGAAACTGATGATG
AATTCGAAGAGATGGAATTTGATGGGCGTGAACATAAATTTCCCTCAAATACATTTATTGAGTTGGACATGAATGCAGTAGATAGCGTTCGTGAGCACGATCCAATTATA
GTCCCAGTGGGCCCTTTCGTTTACCGTGCAACCCACCTTCTTCCCATTCTCCATCCCACACAAAACCCTAGCGTCGCCGCCATCATCGTCGACCACCGTGCTCCGTCGAA
CACTACTCGTAGACGAAGCCAAGCCGAGGAGCCCGGCCAACCGCGTCGTTCCATTCCGTCCCGAGTCGAAGAAGAGCGCAAGCCAGCCGTGTCGTTCTATTCTGTCCCGA
ATCGAGGAGTCCGCACAAACCAGTGTCCCGAGCCGAGCAGTTCACGCTACCTGTCCGTCTGCCATCCTTCGCGCGAGCCGTGCCTAGCCGAGGAGTCTTCCATCCAAGCC
GAGCCGTCCGTCTGCGTGCCATCCAAGCCGCACCGTCGTCCACCTGCTCCTCTAGCCGAGCCGCGTGCTGTCCTTCCTCTCAGTGTGACCCATTCAAGCTATTTGGGGCT
ATTTGTGGTAAGTGTGGATGGGTTTAGTATGCCCATCACTACAAACCTTTGGGTTTTTCATGGTTTGGCATTGGATCTAATTATGGCCTTGTTGTGA
Protein sequenceShow/hide protein sequence
MNTMFSIALSFLNMVHLYVIVSRIDLGIDLNIESRPVEEYVDVDLELDAQPVCDEEEMVANNDYRDFRIETDDEFEEMEFDGREHKFPSNTFIELDMNAVDSVREHDPII
VPVGPFVYRATHLLPILHPTQNPSVAAIIVDHRAPSNTTRRRSQAEEPGQPRRSIPSRVEEERKPAVSFYSVPNRGVRTNQCPEPSSSRYLSVCHPSREPCLAEESSIQA
EPSVCVPSKPHRRPPAPLAEPRAVLPLSVTHSSYLGLFVVSVDGFSMPITTNLWVFHGLALDLIMALL