CuGenDBv2

Gene ID	PI0023301
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr09:5996684..5996947
RNA-Seq Expression	PI0023301
Synteny	PI0023301
Gene Ontology terms	GO:0000723 - telomere maintenance (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0016310 - phosphorylation (biological process) GO:0015074 - DNA integration (biological process) GO:0006116 - NADH oxidation (biological process) GO:0006303 - double-strand break repair via nonhomologous end joining (biological process) GO:0006310 - DNA recombination (biological process) GO:0043564 - Ku70:Ku80 complex (cellular component) GO:0005525 - GTP binding (molecular function) GO:0016301 - kinase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0003954 - NADH dehydrogenase activity (molecular function) GO:0042162 - telomeric DNA binding (molecular function) GO:0003684 - damaged DNA binding (molecular function) GO:0003678 - DNA helicase activity (molecular function)
InterPro domains	IPR029472 - Retrotransposon Copia-like, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034386.1 Beta-galactosidase [Cucumis melo var. makuwa]

3.1e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

TYJ97256.1 Beta-galactosidase [Cucumis melo var. makuwa]

3.1e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

3.1e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

3.1e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

TYK16957.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucumis melo var. makuwa]

3.1e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM64 Beta-galactosidase

1.5e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

A0A5A7UGB2 Beta-galactosidase

1.5e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

A0A5A7V0Y9 Beta-galactosidase

1.5e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

A0A5D3BJK7 Beta-galactosidase

1.5e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

A0A5D3C4T4 Beta-galactosidase

1.5e-32

85.71

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Query:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL
        S GNFSGEKLNGQN+FSWSQSIKMFLEGR QFG LTGEI RPPPG+  ERLW+ EDS IRSMLINSME QIGKPLLYATTAKDL
Subjt:  SKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTTCCCTCCAAAGGTAATTTTTCAGGAGAAAAATTGAATGGCCAGAATTTTTTCTCTTGGTCCCAGTCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGCT
TCTGACTGGTGAGATTCCTCGTCCTCCGCCTGGCAATGATCAAGAACGCCTTTGGAGAGTAGAGGACTCCTTTATTCGGTCCATGCTAATCAATAGTATGGAATCTCAAA
TAGGCAAGCCGCTCCTGTATGCTACTACTGCAAAGGATCTCTAG

mRNA sequence

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Protein sequence

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MVPSKGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGLLTGEIPRPPPGNDQERLWRVEDSFIRSMLINSMESQIGKPLLYATTAKDL

PI0023301 (gene) of Melon (PI 482460) v1 genome