CuGenDBv2

Gene ID	PI0023302
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Coiled-coil domain-containing protein SCD2 isoform X2
Genome location	chr04:20332224..20337551
RNA-Seq Expression	PI0023302
Synteny	PI0023302
Gene Ontology terms	GO:0006631 - fatty acid metabolic process (biological process)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0063644.1 coiled-coil domain-containing protein SCD2 isoform X1 [Cucumis melo var. makuwa]

6.0e-69

72.15

Show/hide

Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +SVRTIQEQPT GHVGSSG+ASQTVNPIEQSLSGRSTLG RPAH DNNVEQPPITRTST+G          Q P TRSTSIS PNLGVKTVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI
        VS+SLKPTLP TPKE QS                   DTRTSLRPALP+TPKEGQVDTRTSHRPTL VTPK+GQFDIKTS RP L            ISI
Subjt:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI

Query:  RPSFLVTPREGQLDTKRDK
        RPSF VTP EGQLDTKRDK
Subjt:  RPSFLVTPREGQLDTKRDK

TYK18382.1 coiled-coil domain-containing protein SCD2 isoform X2 [Cucumis melo var. makuwa]

6.0e-69

72.15

Show/hide

Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +SVRTIQEQPT GHVGSSG+ASQTVNPIEQSLSGRSTLG RPAH DNNVEQPPITRTST+G          Q P TRSTSIS PNLGVKTVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI
        VS+SLKPTLP TPKE QS                   DTRTSLRPALP+TPKEGQVDTRTSHRPTL VTPK+GQFDIKTS RP L            ISI
Subjt:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI

Query:  RPSFLVTPREGQLDTKRDK
        RPSF VTP EGQLDTKRDK
Subjt:  RPSFLVTPREGQLDTKRDK

XP_008455538.1 PREDICTED: coiled-coil domain-containing protein SCD2 isoform X1 [Cucumis melo]

2.3e-68

71.69

Show/hide

Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +SVRTIQEQPT GHVGSSG+ASQTVNP EQSLSGRSTLG RPAH DNNVEQPPITRTST+G          Q P TRSTSIS PNLGVKTVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI
        VS+SLKPTLP TPKE QS                   DTRTSLRPALP+TPKEGQVDTRTSHRPTL VTPK+GQFDIKTS RP L            ISI
Subjt:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI

Query:  RPSFLVTPREGQLDTKRDK
        RPSF VTP EGQLDTKRDK
Subjt:  RPSFLVTPREGQLDTKRDK

XP_011648785.1 coiled-coil domain-containing protein SCD2 [Cucumis sativus]

1.3e-68

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Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +S RTIQEQPTSGH GS G+ASQTVNP EQSLSGRSTLG+RPAH DNNVEQP ITRTSTSG          Q P TRSTSIS PNLGV+TVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQSDTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISIRPSFLVTPREGQLDTKRDK
        VS+SLKPTLP TPKE QSDTRTSLRPALP+TPKEGQVDTR SHRP L VTPK+GQFDIKTS RP L            ISIRPSF VTP EGQLDTKRDK
Subjt:  VSLSLKPTLPATPKESQSDTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISIRPSFLVTPREGQLDTKRDK

XP_016901075.1 PREDICTED: coiled-coil domain-containing protein SCD2 isoform X2 [Cucumis melo]

2.3e-68

71.69

Show/hide

Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +SVRTIQEQPT GHVGSSG+ASQTVNP EQSLSGRSTLG RPAH DNNVEQPPITRTST+G          Q P TRSTSIS PNLGVKTVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI
        VS+SLKPTLP TPKE QS                   DTRTSLRPALP+TPKEGQVDTRTSHRPTL VTPK+GQFDIKTS RP L            ISI
Subjt:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI

Query:  RPSFLVTPREGQLDTKRDK
        RPSF VTP EGQLDTKRDK
Subjt:  RPSFLVTPREGQLDTKRDK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJG0 Uncharacterized protein

6.5e-69

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Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +S RTIQEQPTSGH GS G+ASQTVNP EQSLSGRSTLG+RPAH DNNVEQP ITRTSTSG          Q P TRSTSIS PNLGV+TVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQSDTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISIRPSFLVTPREGQLDTKRDK
        VS+SLKPTLP TPKE QSDTRTSLRPALP+TPKEGQVDTR SHRP L VTPK+GQFDIKTS RP L            ISIRPSF VTP EGQLDTKRDK
Subjt:  VSLSLKPTLPATPKESQSDTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISIRPSFLVTPREGQLDTKRDK

A0A1S3C153 coiled-coil domain-containing protein SCD2 isoform X1

1.1e-68

71.69

Show/hide

Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +SVRTIQEQPT GHVGSSG+ASQTVNP EQSLSGRSTLG RPAH DNNVEQPPITRTST+G          Q P TRSTSIS PNLGVKTVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI
        VS+SLKPTLP TPKE QS                   DTRTSLRPALP+TPKEGQVDTRTSHRPTL VTPK+GQFDIKTS RP L            ISI
Subjt:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI

Query:  RPSFLVTPREGQLDTKRDK
        RPSF VTP EGQLDTKRDK
Subjt:  RPSFLVTPREGQLDTKRDK

A0A1S4DZD1 coiled-coil domain-containing protein SCD2 isoform X2

1.1e-68

71.69

Show/hide

Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +SVRTIQEQPT GHVGSSG+ASQTVNP EQSLSGRSTLG RPAH DNNVEQPPITRTST+G          Q P TRSTSIS PNLGVKTVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI
        VS+SLKPTLP TPKE QS                   DTRTSLRPALP+TPKEGQVDTRTSHRPTL VTPK+GQFDIKTS RP L            ISI
Subjt:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI

Query:  RPSFLVTPREGQLDTKRDK
        RPSF VTP EGQLDTKRDK
Subjt:  RPSFLVTPREGQLDTKRDK

A0A5A7V8V9 Acyl carrier protein

2.9e-69

72.15

Show/hide

Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +SVRTIQEQPT GHVGSSG+ASQTVNPIEQSLSGRSTLG RPAH DNNVEQPPITRTST+G          Q P TRSTSIS PNLGVKTVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI
        VS+SLKPTLP TPKE QS                   DTRTSLRPALP+TPKEGQVDTRTSHRPTL VTPK+GQFDIKTS RP L            ISI
Subjt:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI

Query:  RPSFLVTPREGQLDTKRDK
        RPSF VTP EGQLDTKRDK
Subjt:  RPSFLVTPREGQLDTKRDK

A0A5D3D4B6 Coiled-coil domain-containing protein SCD2 isoform X2

2.9e-69

72.15

Show/hide

Query:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS
        SP +SVRTIQEQPT GHVGSSG+ASQTVNPIEQSLSGRSTLG RPAH DNNVEQPPITRTST+G          Q P TRSTSIS PNLGVKTVPLVPSS
Subjt:  SPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSG----------QAPPTRSTSISCPNLGVKTVPLVPSS

Query:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI
        VS+SLKPTLP TPKE QS                   DTRTSLRPALP+TPKEGQVDTRTSHRPTL VTPK+GQFDIKTS RP L            ISI
Subjt:  VSLSLKPTLPATPKESQS-------------------DTRTSLRPALPITPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTL-----------SISI

Query:  RPSFLVTPREGQLDTKRDK
        RPSF VTP EGQLDTKRDK
Subjt:  RPSFLVTPREGQLDTKRDK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G08630.1 unknown protein

2.0e-06

29.45

Show/hide

Query:  NNLTSDVDELKSVVASLLKDKEKIGDQQNSNNPVRVPTSPHIPTPILNSPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNV
        +N  SDVD  +S  + +       G       P+ + T     T +  S   S    ++   S  + +    SQT N +EQS S RS + ++ +   + +
Subjt:  NNLTSDVDELKSVVASLLKDKEKIGDQQNSNNPVRVPTSPHIPTPILNSPQESVRTIQEQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNV

Query:  EQPPITRTSTSGQAPPTRSTSISCPNLGVKTVPLVPSSVSLSLKPTLPATPKESQSDTRTSLR
        +QPP  R+S +G+               ++T PL+PSSV +SLKP  PA     QS+T T+LR
Subjt:  EQPPITRTSTSGQAPPTRSTSISCPNLGVKTVPLVPSSVSLSLKPTLPATPKESQSDTRTSLR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCCTGATCATGGCTATGTACGAGGATTGGGATTTGGTGTGACTACATCGAAGGTGTTTAC
ATCAATTCAGAAAGATAAAACCATTGCATGTCTTGAAAAAAAATGTAACAACCTAACCTCAGATGTAGATGAGCTGAAAAGTGTGGTAGCTTCCTTACTAAAGGACAAGG
AAAAAATAGGTGATCAACAAAATTCTAATAATCCTGTTAGAGTACCAACATCGCCACATATTCCTACTCCAATCCTAAATTCCCCACAGGAATCTGTTCGAACTATTCAA
GAACAACCTACTTCAGGACACGTGGGATCAAGCGGTCAAGCATCTCAAACTGTGAACCCTATAGAGCAATCATTGTCGGGTCGTTCAACGTTAGGACATCGACCAGCTCA
TTATGATAATAATGTTGAACAGCCGCCCATTACTCGCACTTCAACCTCTGGACAAGCTCCACCTACTCGTTCAACATCAATTAGTTGTCCAAATTTGGGAGTAAAGACAG
TTCCATTGGTACCTTCTTCTGTATCTTTATCACTTAAACCAACATTGCCAGCAACTCCCAAAGAGAGTCAATCTGATACAAGAACATCACTTAGACCAGCCCTGCCAATA
ACTCCAAAAGAGGGTCAAGTTGATACTAGAACATCACATAGACCAACCTTGCTTGTAACTCCAAAAAAGGGTCAATTTGATATTAAAACGTCACGTAGGCCAACCTTGTC
CATATCAATTAGACCAAGCTTTCTAGTAACTCCAAGAGAGGGTCAGTTAGACACCAAAAGAGATAAGAGTTGA

mRNA sequence

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Protein sequence

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MSSSSSMIEDAISRVFGPDHGYVRGLGFGVTTSKVFTSIQKDKTIACLEKKCNNLTSDVDELKSVVASLLKDKEKIGDQQNSNNPVRVPTSPHIPTPILNSPQESVRTIQ
EQPTSGHVGSSGQASQTVNPIEQSLSGRSTLGHRPAHYDNNVEQPPITRTSTSGQAPPTRSTSISCPNLGVKTVPLVPSSVSLSLKPTLPATPKESQSDTRTSLRPALPI
TPKEGQVDTRTSHRPTLLVTPKKGQFDIKTSRRPTLSISIRPSFLVTPREGQLDTKRDKS

PI0023302 (gene) of Melon (PI 482460) v1 genome