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PI0023303 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023303
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr04:17351073..17352763
RNA-Seq ExpressionPI0023303
SyntenyPI0023303
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]3.1e-5161.72Show/hide
Query:  RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+RPSSS N  PSPMSADQYAMDLGFTTVTRS++RSS IRI SPTESSTPP+PS NL+RPSGG+ QMR P SP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKDDELASPEY
         P+KR                                               SKLLAALAQATTDADFQRLLST VNAS+SSKS SSSIQ+D+E    EY
Subjt:  APEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKDDELASPEY

Query:  DLNDPFLDS
        DL+DP+LDS
Subjt:  DLNDPFLDS

KAA0053156.1 hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]3.1e-4352.74Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSPMS DQYAM LGFTT+T+SK+RSSGIRI SPTES TPPRP ANL+RPSG + QMR P SPLSN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD
        PTTYSQAV P+KRF+PR EIK+YFQK    T+ +  +   E GY                                                 SSSIQ+D
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD

Query:  DELASPEYDLNDPFLDSQPILLSKYCSVIQKSRRKMK
        +E   PEYDL+D FLDSQP+     C+  QK+  K K
Subjt:  DELASPEYDLNDPFLDSQPILLSKYCSVIQKSRRKMK

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]7.4e-4554.84Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+  SSS N APSP  ADQYAM++GFTTVTRS++RSS IRI S TES+TPPRPS NL+ PS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD
         TTYSQAV P+KRF+PRPEIK+YFQK                                     L  +     + ++Q      +NAS+SSKS SSSIQ+D
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD

Query:  DELASPEYDLNDPFLDS
        +E   PEYDL+DPFLDS
Subjt:  DELASPEYDLNDPFLDS

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]9.3e-6467.12Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+ PSSS N APSPMS DQYAMDLG+TTV +S+++SSGI I SP ESSTPPRPS NL+ P G + QMR  ASP SN ESST 
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD
        PTTYSQAV P+K+F+PR EIK+YFQK +      ++  + +NG LQDIDQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAVN S+SSK A S IQ+D
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD

Query:  DELASPEYDLNDPFLDSQP
        +E    EYDL+DPFLDSQP
Subjt:  DELASPEYDLNDPFLDSQP

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]1.5e-4277.34Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+RPSG + QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        PTTYSQAV P+KRF+PRP+IK+YFQK +
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQV

TrEMBL top hitse value%identityAlignment
A0A5A7U8A0 Uncharacterized protein1.5e-5161.72Show/hide
Query:  RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAV
        RGR +STSSKG+RPSSS N  PSPMSADQYAMDLGFTTVTRS++RSS IRI SPTESSTPP+PS NL+RPSGG+ QMR P SP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAV

Query:  APEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKDDELASPEY
         P+KR                                               SKLLAALAQATTDADFQRLLST VNAS+SSKS SSSIQ+D+E    EY
Subjt:  APEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKDDELASPEY

Query:  DLNDPFLDS
        DL+DP+LDS
Subjt:  DLNDPFLDS

A0A5A7UFZ9 Uncharacterized protein1.5e-4352.74Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSPMS DQYAM LGFTT+T+SK+RSSGIRI SPTES TPPRP ANL+RPSG + QMR P SPLSN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD
        PTTYSQAV P+KRF+PR EIK+YFQK    T+ +  +   E GY                                                 SSSIQ+D
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD

Query:  DELASPEYDLNDPFLDSQPILLSKYCSVIQKSRRKMK
        +E   PEYDL+D FLDSQP+     C+  QK+  K K
Subjt:  DELASPEYDLNDPFLDSQPILLSKYCSVIQKSRRKMK

A0A5D3BI61 Uncharacterized protein4.5e-6467.12Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+ PSSS N APSPMS DQYAMDLG+TTV +S+++SSGI I SP ESSTPPRPS NL+ P G + QMR  ASP SN ESST 
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD
        PTTYSQAV P+K+F+PR EIK+YFQK +      ++  + +NG LQDIDQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAVN S+SSK A S IQ+D
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD

Query:  DELASPEYDLNDPFLDSQP
        +E    EYDL+DPFLDSQP
Subjt:  DELASPEYDLNDPFLDSQP

A0A5D3BPD3 Uncharacterized protein3.6e-4554.84Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+  SSS N APSP  ADQYAM++GFTTVTRS++RSS IRI S TES+TPPRPS NL+ PS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD
         TTYSQAV P+KRF+PRPEIK+YFQK                                     L  +     + ++Q      +NAS+SSKS SSSIQ+D
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKD

Query:  DELASPEYDLNDPFLDS
        +E   PEYDL+DPFLDS
Subjt:  DELASPEYDLNDPFLDS

A0A5D3CKX1 Uncharacterized protein7.5e-4377.34Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+RPSG + QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        PTTYSQAV P+KRF+PRP+IK+YFQK +
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGA
TCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATG
CCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGAAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATTTTACTC
AGTAAATATTGTTCCGTCATCCAGAAATCCAGGCGAAAAATGAAGACAACAAAGCTTCAAGAAATTGCGTATTTCATGGAGTATTCGACTACGTTAGATGGTCCCGGCAG
TAAGTCGCAAGATTTGGCGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGA
TCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATG
CCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGAAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATTTTACTC
AGTAAATATTGTTCCGTCATCCAGAAATCCAGGCGAAAAATGAAGACAACAAAGCTTCAAGAAATTGCGTATTTCATGGAGTATTCGACTACGTTAGATGGTCCCGGCAG
TAAGTCGCAAGATTTGGCGCGGTGA
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQKDDELASPEYDLNDPFLDSQPILL
SKYCSVIQKSRRKMKTTKLQEIAYFMEYSTTLDGPGSKSQDLAR