CuGenDBv2

Gene ID	PI0023310
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	cytochrome c oxidase-assembly factor COX23, mitochondrial
Genome location	chr06:2377952..2380740
RNA-Seq Expression	PI0023310
Synteny	PI0023310
Gene Ontology terms	NA
InterPro domains	IPR009069 - Cysteine alpha-hairpin motif superfamily IPR010625 - CHCH

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0049122.1 cytochrome c oxidase-assembly factor COX23 [Cucumis melo var. makuwa]

1.0e-28

94.52

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP  PY SAARISDSPCYPQYSASLKCLEV+SSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

XP_004133972.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucumis sativus]

5.4e-30

97.26

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDPT PY SAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

XP_022924627.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita moschata]

2.5e-27

90.41

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP+ PY SAARISDSPC+PQYSASLKCLE HSSE+SKCQEHFDVYKECKKKEREARLERNK RSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

XP_023527834.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita pepo subsp. pepo]

3.6e-26

89.04

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP+ PY SAARISDSPC+ QYSASLKCLE HSSE+SKCQEHFDVYKECKKKEREARLERNK RSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

XP_038906947.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Benincasa hispida]

4.3e-27

89.04

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP  PY SAARISDSPCYPQYSASLKCLE H+SEKSKC+EHFDVYKECKKKEREARLERN+ RSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4K5 CHCH domain-containing protein

2.6e-30

97.26

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDPT PY SAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

A0A5A7U004 Cytochrome c oxidase-assembly factor COX23

5.0e-29

94.52

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP  PY SAARISDSPCYPQYSASLKCLEV+SSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

A0A6J1D157 cytochrome c oxidase-assembly factor COX23, mitochondrial

1.8e-26

87.67

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MAST+RD   PY SAARISDSPCYPQYSASLKCLE HSSEK+KCQEHFDVYKECKKKEREARLERN+ RSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

A0A6J1E9H8 cytochrome c oxidase-assembly factor COX23, mitochondrial

1.2e-27

90.41

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP+ PY SAARISDSPC+PQYSASLKCLE HSSE+SKCQEHFDVYKECKKKEREARLERNK RSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

A0A6J1ITM4 cytochrome c oxidase-assembly factor COX23, mitochondrial

3.0e-26

89.04

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Query:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        MASTSRDP  PY SAARISDSPC+ QYSASLKCLE HSSE+SKCQEHFDVYKECKKKEREARLERNK RSFFS
Subjt:  MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

SwissProt top hits

e value

%identity

Alignment

Q6FQX5 Cytochrome c oxidase-assembly factor COX23, mitochondrial

9.1e-04

46.34

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Query:  PCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREAR
        PC      S KCLE++  ++ +C+E+FD Y+ECKK+  EAR
Subjt:  PCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREAR

Arabidopsis top hits

e value

%identity

Alignment

AT1G02160.1 Cox19 family protein (CHCH motif)

6.2e-24

87.1

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Query:  YTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS
        Y SAARISDSPCY QYSASLKCLE   S+KSKCQ+HFDVYKECKKKEREARLERNKTRS FS
Subjt:  YTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

AT1G02160.2 Cox19 family protein (CHCH motif)

1.6e-16

85.11

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Query:  YTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKE
        Y SAARISDSPCY QYSASLKCLE   S+KSKCQ+HFDVYKECKKKE
Subjt:  YTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKE

Sequences

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CDS sequence

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ATGGCTTCCACTTCTAGGGATCCAACTCTGCCGTACACCAGTGCTGCTAGAATTTCCGATTCTCCTTGTTATCCTCAGTATAGCGCTTCCCTCAAATGTCTTGAAGTACA
TAGCTCAGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAGAAAGAGCGGGAAGCTCGATTGGAACGCAACAAGACGCGGTCTTTCTTCTCAT
GA

mRNA sequence

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AAAAAAGAAAAAATAATCGGTCGGGTTGGACCGGATTGAATCGGCTTGATACAAATAACTATAAATGGAGATTGATTCGCTTGCCCTCTCATCGGAATATCAGGGAGTCA
TTTTAACCGACCTCTATTTTCCGCCAATACAGAGTGTGCTTTTCCGCCATGGCTTCCACTTCTAGGGATCCAACTCTGCCGTACACCAGTGCTGCTAGAATTTCCGATTC
TCCTTGTTATCCTCAGTATAGCGCTTCCCTCAAATGTCTTGAAGTACATAGCTCAGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAGAAAG
AGCGGGAAGCTCGATTGGAACGCAACAAGACGCGGTCTTTCTTCTCATGAAATTATCTTCAGGCATGTTTCTTGATGTTAAAGTATGTATGTTTTTTATGCAATCTACAC
TCATTTATTAATCTTCTTGTAGATTTCTCTGGTGCTCATCAAGACGACAACTCAGCATGTATTCCCCACTTACTATTAGTCATCTATTGATAAATTCTTACAGAGTTTTT
ACATTTCTACAATGAAAATTGATCCTCAATTTGATCTAAATAGTGCAAGCTTCAAGAATTACACGGCAGTTAAAAAGTATCTATTTCCTTTTAAAGAGACTGTAAGTTAA
AACCTCCAATGTTATATGATAAAATGTTCTATTAAGTTGATCCTGGATGATTGCTCGACCCTTTCAAATTTTTAGGCTAATGATTTGAGTCTTATTTGATAGGTTATTGG
TTATATATATATATACTTGAATTCAACAAGTGGAAATAAGAACTCAAACCTACCACCACTTTATATTCTACTCGATGATGATTATTGATTGCATATGACTTGAAATTGAA
CTTCATGTTCATTTGGTGAATAATTCTATGAAATGTCTACCCACACTTTTAGGGTTTTTTTTAAAACTTAGGAATGTTTAGGATTATGTTGCGTAGGCTATTTTACCTCA
TGTACTAAAAGAGGAAAATTGTCCAACAAA

Protein sequence

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MASTSRDPTLPYTSAARISDSPCYPQYSASLKCLEVHSSEKSKCQEHFDVYKECKKKEREARLERNKTRSFFS

PI0023310 (gene) of Melon (PI 482460) v1 genome