; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023322 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023322
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed RNA polymerase III subunit rpc6-like
Genome locationchr06:27471305..27473093
RNA-Seq ExpressionPI0023322
SyntenyPI0023322
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007832 - RNA polymerase Rpc34
IPR016049 - RNA polymerase Rpc34-like
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13079.1 DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa]3.1e-13096.71Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKS+GPSSLKRKRPDL TKNS+ GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

TYK19400.1 DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo var. makuwa]4.6e-13498.35Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKS+GPSSLKRKRPDLGTKNS+GGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

XP_004148278.1 DNA-directed RNA polymerase III subunit RPC6 [Cucumis sativus]1.6e-13498.77Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KSEGPSSLKRKRPDLGTKNS+GGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

XP_008439941.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo]3.1e-13096.71Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKS+GPSSLKRKRPDL TKNS+ GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

XP_008448982.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo]4.6e-13498.35Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKS+GPSSLKRKRPDLGTKNS+GGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

TrEMBL top hitse value%identityAlignment
A0A0A0L5W6 Uncharacterized protein7.7e-13598.77Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KSEGPSSLKRKRPDLGTKNS+GGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

A0A1S3BL06 DNA-directed RNA polymerase III subunit rpc6-like2.2e-13498.35Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKS+GPSSLKRKRPDLGTKNS+GGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

A0A5A7UBI4 DNA-directed RNA polymerase III subunit RPC6-like1.5e-13096.71Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKS+GPSSLKRKRPDL TKNS+ GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

A0A5D3CS47 DNA-directed RNA polymerase III subunit RPC6-like1.5e-13096.71Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKS+GPSSLKRKRPDL TKNS+ GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

A0A5D3D7H7 DNA-directed RNA polymerase III subunit rpc6-like2.2e-13498.35Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKS+GPSSLKRKRPDLGTKNS+GGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF

SwissProt top hitse value%identityAlignment
Q2T9S3 DNA-directed RNA polymerase III subunit RPC62.6e-2331.03Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS
        K     E           SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+  +        P TG +  
Subjt:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS

Query:  IPCGVCPRITHCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITHCTPNGIISPATCVYYTKWLDF

Q86JM3 DNA-directed RNA polymerase III subunit rpc63.2e-2127.46Show/hide
Query:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        +  S+  +S K   P+   K    G    ++ ++Y LI +  + G  T ++K  + + +  +TK LK+L+++ LIK V+  Q+  KK Y+  + EP++E+
Subjt:  MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGG
        TGG  Y D   D  YI  +K      +  K  + +  I+   ++    A    L  E I+ +VN ++ D  + E++ +  G       G I YK      
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGG

Query:  GLKGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLD
          K         ++PCG CP    C+ NG++SP  CVY+ ++L+
Subjt:  GLKGEPKTGAMASIPCGVCPRITHCTPNGIISPATCVYYTKWLD

Q921X6 DNA-directed RNA polymerase III subunit RPC62.0e-2331.03Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEG----IVE---SFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS
        K     E     +++   SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+           P TG + +
Subjt:  KKLMTIEG----IVE---SFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS

Query:  IPCGVCPRITHCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITHCTPNGIISPATCVYYTKWLDF

Q9H1D9 DNA-directed RNA polymerase III subunit RPC64.5e-2331.03Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS
        K     E           SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+           P TG +  
Subjt:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMAS

Query:  IPCGVCPRITHCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITHCTPNGIISPATCVYYTKWLDF

Q9VD25 Probable DNA-directed RNA polymerase III subunit RPC67.2e-2127.39Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        +EKV+Y ++    + GI   D++ ++      + K LK+L+TK LIK V+      KK Y+  + EP   +TGG WY+D + + ++++ L Q C R +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KK-----------------LMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMASI
        K+                   T+  + +     G  KV L+   +E I+  +V D     V+    G F +  +                 P TG +  +
Subjt:  KK-----------------LMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMASI

Query:  PCGVCPRITHCTPNGIISPATCVYYTKWLD
        PCG+CP I +C+  G ++  TC Y   WLD
Subjt:  PCGVCPRITHCTPNGIISPATCVYYTKWLD

Arabidopsis top hitse value%identityAlignment
AT5G23710.1 DNA binding;DNA-directed RNA polymerases3.6e-5246.81Show/hide
Query:  KRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE
        KRKRPD   K+S G      EK L DLI   Q  G   F++KRE     ++VT+ + SL+ K LIK V +  NKG K YL+ +FEP  ELTGG WY DG 
Subjt:  KRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE

Query:  LDKDYINTLKQVCARMIQ--RKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGA
        LD   I  LK  C  +++  R++++T+E +   F +    + +LS +Q +EI+  L+LDN +MEVKS+G  EF    IG++CY+   +  G  GEP+ GA
Subjt:  LDKDYINTLKQVCARMIQ--RKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGA

Query:  MASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF
         ASIPCGVCP I  C+P+G+ISP TCVY+ KWLDF
Subjt:  MASIPCGVCPRITHCTPNGIISPATCVYYTKWLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAATCAGAAGGGCCATCATCACTCAAGAGAAAAAGGCCAGATTTGGGTACGAAAAATTCCACTGGAGGAGCTCTAATTGGGCAAGAAAAAGTTCTCTATGACCT
AATTTGCAGTAAGCAAAGCATGGGGATTTGCACTTTTGACATGAAAAGAGAGACAAAGTTTGCTGAAAGTGTAGTAACAAAATCCCTCAAGTCTCTTCAAACCAAAGGCC
TGATAAAGATAGTCCAACACTATCAAAACAAAGGCAAGAAGTTCTACCTATCAAACGACTTCGAACCAGCTAAGGAATTAACCGGCGGTAACTGGTATCGTGACGGGGAG
CTCGACAAAGACTACATCAATACTCTCAAACAAGTTTGTGCAAGAATGATACAAAGGAAGAAGTTGATGACCATTGAAGGAATTGTGGAGTCTTTCAAACAGAGTGGGGC
TTTCAAAGTAGAGTTGTCAAGAGAGCAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATCAAGTGATGGAAGTGAAGAGCTCTGGATTTGGTGAATTTGAATTTA
TTCCAATTGGGAAGATTTGTTACAAGTATTGTACTCAAGGAGGAGGCCTCAAAGGGGAGCCTAAAACAGGGGCAATGGCTTCCATTCCTTGCGGAGTTTGTCCAAGGATC
ACTCATTGTACCCCAAATGGCATCATTTCTCCCGCGACCTGTGTCTATTATACCAAGTGGTTAGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
AGCCAGATTTTGACGATTGAACGTTTGATGATATGCTGGATTGGGAAAAAGAGTTTTCTTTACAGATTACTCAAATTTAGTTTCGTTAATGTCAATCACCCGAATTCTAA
AACTAATGAAAACTAATATTAGACACTGTCAACATCAATTTGTTTGACATTAGTGCAACCAAATTTGGATTATCCGTAAAGAAAAAAACACTCTCGGCGAAATGGGTATC
TGTTGTTTTTGTTAAGAAACATGGTAGGAAGCAAATTATTAGACACTCTCAACATCAATTTGTCTGAAACACTATAATATTGGTGCAGCAATGAGTAAATCAGAAGGGCC
ATCATCACTCAAGAGAAAAAGGCCAGATTTGGGTACGAAAAATTCCACTGGAGGAGCTCTAATTGGGCAAGAAAAAGTTCTCTATGACCTAATTTGCAGTAAGCAAAGCA
TGGGGATTTGCACTTTTGACATGAAAAGAGAGACAAAGTTTGCTGAAAGTGTAGTAACAAAATCCCTCAAGTCTCTTCAAACCAAAGGCCTGATAAAGATAGTCCAACAC
TATCAAAACAAAGGCAAGAAGTTCTACCTATCAAACGACTTCGAACCAGCTAAGGAATTAACCGGCGGTAACTGGTATCGTGACGGGGAGCTCGACAAAGACTACATCAA
TACTCTCAAACAAGTTTGTGCAAGAATGATACAAAGGAAGAAGTTGATGACCATTGAAGGAATTGTGGAGTCTTTCAAACAGAGTGGGGCTTTCAAAGTAGAGTTGTCAA
GAGAGCAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATCAAGTGATGGAAGTGAAGAGCTCTGGATTTGGTGAATTTGAATTTATTCCAATTGGGAAGATTTGT
TACAAGTATTGTACTCAAGGAGGAGGCCTCAAAGGGGAGCCTAAAACAGGGGCAATGGCTTCCATTCCTTGCGGAGTTTGTCCAAGGATCACTCATTGTACCCCAAATGG
CATCATTTCTCCCGCGACCTGTGTCTATTATACCAAGTGGTTAGATTTTTAA
Protein sequenceShow/hide protein sequence
MSKSEGPSSLKRKRPDLGTKNSTGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE
LDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRI
THCTPNGIISPATCVYYTKWLDF