CuGenDBv2

Gene ID	PI0023334
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Kinesin light chain 3 isoform X1
Genome location	chr06:11581014..11584465
RNA-Seq Expression	PI0023334
Synteny	PI0023334
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0047377.1 kinesin light chain 3 isoform X1 [Cucumis melo var. makuwa]

3.3e-101

87.11

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Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK LKRLSFRSTAFH TS APN PNVSI SSRCNVKSSS  NSNG+HDGYLNGFPWV LSGPAAAIILGINSNPVLAEEASFKPSSENG EDG
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEET
        EDIR    +   G+   ++ K++E+
Subjt:  EDIRPNLVVKMEGRVSALEEKMEET

XP_008457118.2 PREDICTED: uncharacterized protein LOC103496867 [Cucumis melo]

3.3e-101

87.11

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Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK LKRLSFRSTAFH TS APN PNVSI SSRCNVKSSS  NSNG+HDGYLNGFPWV LSGPAAAIILGINSNPVLAEEASFKPSSENG EDG
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEET
        EDIR    +   G+   ++ K++E+
Subjt:  EDIRPNLVVKMEGRVSALEEKMEET

XP_011651210.1 uncharacterized protein LOC101207905 isoform X1 [Cucumis sativus]

6.6e-102

87.11

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Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK LKRLSFRSTAFHHTSGAPNFPNVSI SSRCN KSSS  NSNG+HDGYLN FPWVLLSGPA+AIILGINSNPVLAEEASFKPSSENG EDG
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAI ILEESYGT
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEET
        EDIR    +   G+   ++ K++E+
Subjt:  EDIRPNLVVKMEGRVSALEEKMEET

XP_031738901.1 uncharacterized protein LOC101207905 isoform X2 [Cucumis sativus]

6.6e-102

87.11

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Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK LKRLSFRSTAFHHTSGAPNFPNVSI SSRCN KSSS  NSNG+HDGYLN FPWVLLSGPA+AIILGINSNPVLAEEASFKPSSENG EDG
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAI ILEESYGT
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEET
        EDIR    +   G+   ++ K++E+
Subjt:  EDIRPNLVVKMEGRVSALEEKMEET

XP_038901521.1 uncharacterized protein LOC120088362 isoform X1 [Benincasa hispida]

6.2e-92

79.56

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Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK L RL FRST FH T  +P  PNVSI  SRCNVKSSS NNSNG HD YLNGFPWVLL GPAAAIILGINSNPVLA++ASFKPSSENG ED 
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        +T+GLRKVEDGSV+SNLHTSKWRVFTDTARDLFLQGRLE+AEKYFI+AI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAI+ILEESYG 
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEET
        EDIR    +   G+   ++ K++E+
Subjt:  EDIRPNLVVKMEGRVSALEEKMEET

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LA19 TPR_REGION domain-containing protein

3.9e-124

91.89

Show/hide

Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK LKRLSFRSTAFHHTSGAPNFPNVSI SSRCN KSSS  NSNG+HDGYLN FPWVLLSGPA+AIILGINSNPVLAEEASFKPSSENG EDG
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAI ILEESYGT
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEETGENQSGLDTKVEARFKEANGRFVVVNEQMSLVFA
        EDIR   VVKMEGRVSALEEKMEE  +NQS LD+KVEARFKEANGRFVVVNEQMSLV +
Subjt:  EDIRPNLVVKMEGRVSALEEKMEETGENQSGLDTKVEARFKEANGRFVVVNEQMSLVFA

A0A1S3C5G7 uncharacterized protein LOC103496867

1.6e-101

87.11

Show/hide

Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK LKRLSFRSTAFH TS APN PNVSI SSRCNVKSSS  NSNG+HDGYLNGFPWV LSGPAAAIILGINSNPVLAEEASFKPSSENG EDG
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEET
        EDIR    +   G+   ++ K++E+
Subjt:  EDIRPNLVVKMEGRVSALEEKMEET

A0A5A7TZJ1 Kinesin light chain 3 isoform X1

1.6e-101

87.11

Show/hide

Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK LKRLSFRSTAFH TS APN PNVSI SSRCNVKSSS  NSNG+HDGYLNGFPWV LSGPAAAIILGINSNPVLAEEASFKPSSENG EDG
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEET
        EDIR    +   G+   ++ K++E+
Subjt:  EDIRPNLVVKMEGRVSALEEKMEET

A0A5D3CQC2 Kinesin light chain 3

6.7e-92

81.78

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Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTRQAASK LKRLSFRSTAFH TS APN PNVSI SSRCNVKSSS  NSNG+HDGYLNGFPWV LSGPAAAIILGINSNPVLAEEASFKPSSENG EDG
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        ETVGLRKVEDGSVVSNLHTSKWR            GRLEDAEKYFISAI EAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEET
        EDIR    +   G+   ++ K++E+
Subjt:  EDIRPNLVVKMEGRVSALEEKMEET

A0A6J1KEU5 uncharacterized protein LOC111492620

1.1e-89

76.99

Show/hide

Query:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG
        MYTR AASK LKRLSFRSTAF+ TS  P   NV I SSRCNVKSSS NNSN + DGYLNGFPWVL SGPAAAIILGINSNPVLA++A  KPSSENG E+ 
Subjt:  MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSI-SSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDG

Query:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT
        +T+GLRKVEDGSV+SNLHTSKWRVFTD ARDLFLQG+LE+AE+YF+SAI EAKEGFGERDPHVASAFNNLAELYRV KTFDKAEPMYLEAINILEESYG+
Subjt:  ETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGT

Query:  EDIRPNLVVKMEGRVSALEEKMEETG
        EDIR    +   G+   ++ K++E G
Subjt:  EDIRPNLVVKMEGRVSALEEKMEETG

SwissProt top hits

e value

%identity

Alignment

A5HK05 Amyloid protein-binding protein 2

4.1e-06

37.33

Show/hide

Query:  QGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVV
        Q  L++A    +S++  AK+ FGE +   A  + NL  LY+ M+ F +AE M+++AI I E+  G ED    L V
Subjt:  QGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVV

Q6AZT7 Nephrocystin-3

1.7e-04

Show/hide

Query:  QGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYG
        +G+L+ A   +  A+   ++ FG + P VA+A  NLA LY  MK  D A P+Y  A+ I E+S G
Subjt:  QGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYG

Q7Z494 Nephrocystin-3

3.0e-04

39.06

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Query:  GRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYG
        G+L+ A   +  A+   ++ FG + P VA+A  NLA LY  MK   +A P+Y  A+ I E+S G
Subjt:  GRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYG

Q92624 Amyloid protein-binding protein 2

4.1e-06

37.33

Show/hide

Query:  QGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVV
        Q  L++A    +S++  AK+ FGE +   A  + NL  LY+ M+ F +AE M+++AI I E+  G ED    L V
Subjt:  QGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVV

Q9DAX9 Amyloid protein-binding protein 2

4.1e-06

37.33

Show/hide

Query:  QGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVV
        Q  L++A    +S++  AK+ FGE +   A  + NL  LY+ M+ F +AE M+++AI I E+  G ED    L V
Subjt:  QGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVV

Arabidopsis top hits

e value

%identity

Alignment

AT5G37590.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.8e-50

56.98

Show/hide

Query:  NNSNGHHDG--YLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDGETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYF
        N+  GH      L+   W++LSG AA  ILG   N VLAE+ S K  S +  ++    GL K+EDGSVVSN+HTSKWRVFTD+ RD F QG+LE AE+ F
Subjt:  NNSNGHHDG--YLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDGETVGLRKVEDGSVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYF

Query:  ISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVVKMEGRVSALEEKMEE
         SAI EAKEGFGE+DPHVASA NNLAELYRV K FDKAEP+YLEA++ILEE YG +D+R    +   G++  ++ K+EE
Subjt:  ISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVVKMEGRVSALEEKMEE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTACACAAGACAAGCTGCTTCAAAATGTCTAAAGAGATTAAGCTTTCGCTCTACAGCATTCCATCACACTTCGGGAGCTCCCAATTTTCCTAACGTATCAATCTCTTC
TCGCTGCAACGTGAAATCTTCTTCGGGTAATAATAGTAATGGCCATCATGATGGTTATCTCAATGGTTTTCCATGGGTTCTTTTGTCTGGACCTGCTGCAGCTATTATTC
TTGGAATAAACTCAAATCCTGTTCTAGCTGAAGAAGCATCATTTAAGCCAAGTTCTGAAAATGGTTTTGAGGATGGTGAGACTGTTGGACTACGCAAAGTGGAGGATGGT
TCTGTGGTATCGAATTTACATACTTCAAAGTGGAGGGTTTTTACTGATACTGCTCGGGACTTATTTCTTCAGGGAAGACTTGAAGACGCGGAAAAATATTTTATCTCTGC
GATTCACGAAGCTAAAGAAGGTTTTGGGGAGAGAGATCCTCATGTTGCATCTGCCTTCAACAATCTGGCAGAACTGTATAGAGTCATGAAAACATTTGACAAAGCGGAGC
CCATGTATTTGGAAGCCATTAACATACTGGAGGAATCTTATGGCACTGAAGATATAAGGCCCAATTTGGTGGTTAAGATGGAAGGTAGAGTAAGTGCATTGGAGGAGAAG
ATGGAGGAAACCGGTGAGAACCAATCAGGGTTGGATACGAAGGTGGAGGCTAGATTTAAAGAAGCGAATGGGAGGTTCGTGGTAGTGAATGAGCAGATGAGTTTAGTGTT
TGCATTTGGATGTGTTAATGGGTGA

mRNA sequence

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Protein sequence

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MYTRQAASKCLKRLSFRSTAFHHTSGAPNFPNVSISSRCNVKSSSGNNSNGHHDGYLNGFPWVLLSGPAAAIILGINSNPVLAEEASFKPSSENGFEDGETVGLRKVEDG
SVVSNLHTSKWRVFTDTARDLFLQGRLEDAEKYFISAIHEAKEGFGERDPHVASAFNNLAELYRVMKTFDKAEPMYLEAINILEESYGTEDIRPNLVVKMEGRVSALEEK
MEETGENQSGLDTKVEARFKEANGRFVVVNEQMSLVFAFGCVNG

PI0023334 (gene) of Melon (PI 482460) v1 genome