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PI0023345 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023345
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr01:10604169..10604764
RNA-Seq ExpressionPI0023345
SyntenyPI0023345
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036882.1 uncharacterized protein E6C27_scaffold2534G00010 [Cucumis melo var. makuwa]8.6e-0860.78Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE
        II+ E D+C+ FERGL F IRTPVTA   W+NFS LVE  +RVE+SI +E+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE

KAA0046379.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]6.6e-0856.86Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE
        I++ E D+C+ FERGL F IRTP+T    W+NFS LVE T+RVE+SI +E+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE

KAA0050832.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.1e-0860.78Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE
        I++ E DKC+ FERGL F IRTPVTA   W+NFS LVE  +RVE+SI +E+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE

TYK06540.1 reverse transcriptase [Cucumis melo var. makuwa]6.6e-0856.86Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE
        I++ E D+C+ FERGL F IRTP+T    W+NFS LVE T+RVE+SI +E+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE

TYK11035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.9e-0855.74Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEEKEETVISTRS
        I++ E D+C+ FERGL F IRTPVTA   W+NFS LVE  +RVE+SI  EEK    +S R+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEEKEETVISTRS

TrEMBL top hitse value%identityAlignment
A0A5A7T8K4 Retrotrans_gag domain-containing protein4.2e-0860.78Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE
        II+ E D+C+ FERGL F IRTPVTA   W+NFS LVE  +RVE+SI +E+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE

A0A5A7TYQ3 DNA/RNA polymerases superfamily protein3.2e-0856.86Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE
        I++ E D+C+ FERGL F IRTP+T    W+NFS LVE T+RVE+SI +E+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE

A0A5A7U4R7 Reverse transcriptase2.5e-0860.78Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE
        I++ E DKC+ FERGL F IRTPVTA   W+NFS LVE  +RVE+SI +E+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE

A0A5D3C5C8 Reverse transcriptase3.2e-0856.86Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE
        I++ E D+C+ FERGL F IRTP+T    W+NFS LVE T+RVE+SI +E+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEE

A0A5D3CHM7 DNA/RNA polymerases superfamily protein1.9e-0855.74Show/hide
Query:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEEKEETVISTRS
        I++ E D+C+ FERGL F IRTPVTA   W+NFS LVE  +RVE+SI  EEK    +S R+
Subjt:  IISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEEKEETVISTRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTATTTCGATAGAAAAAGACAAATGCAAGCATTTTGAGAGAGGTTTGAATTTTAACATTAGAACGCCAGTTACTGCTTGTATGACATGGAGTAATTTTTCGGT
TTTGGTTGAAGCAACCATGCGAGTAGAGAAAAGCATAGGAAAGGAGGAAAAAGAAGAAACTGTGATTTCCACGCGAAGCGGTAAGGAAGTGGAAAGAGAAAGAGTGGAGA
AGAGTTTGAAAAGAGCAAGGACTAAATTTTCTAGTCAAGGCAAGCAAATCTTCCAGGTAACATACAAACTGATCCAACAAAAAACCACAAGCACCAACAACTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTATTTCGATAGAAAAAGACAAATGCAAGCATTTTGAGAGAGGTTTGAATTTTAACATTAGAACGCCAGTTACTGCTTGTATGACATGGAGTAATTTTTCGGT
TTTGGTTGAAGCAACCATGCGAGTAGAGAAAAGCATAGGAAAGGAGGAAAAAGAAGAAACTGTGATTTCCACGCGAAGCGGTAAGGAAGTGGAAAGAGAAAGAGTGGAGA
AGAGTTTGAAAAGAGCAAGGACTAAATTTTCTAGTCAAGGCAAGCAAATCTTCCAGGTAACATACAAACTGATCCAACAAAAAACCACAAGCACCAACAACTCTTAA
Protein sequenceShow/hide protein sequence
MEIISIEKDKCKHFERGLNFNIRTPVTACMTWSNFSVLVEATMRVEKSIGKEEKEETVISTRSGKEVERERVEKSLKRARTKFSSQGKQIFQVTYKLIQQKTTSTNNS