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PI0023348 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023348
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPhotosystem I reaction centre subunit N
Genome locationchr01:1105527..1107422
RNA-Seq ExpressionPI0023348
SyntenyPI0023348
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009522 - photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136934.1 uncharacterized protein LOC101214221 [Cucumis sativus]1.4e-5294.57Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAA-TVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDY
        MSSIGQSILMALAVTLNKFASSNVQSVQRNKAT TATV+SPIGRR LLLST+APASAAAA TVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDY
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAA-TVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDY

Query:  FEFVEGSVKNKNELSEAEKGIIEWLKRNK
        FEFVEGSVKNKNELSEAEKGI+EWLKR+K
Subjt:  FEFVEGSVKNKNELSEAEKGIIEWLKRNK

XP_008455049.1 PREDICTED: uncharacterized protein LOC103495319 [Cucumis melo]9.8e-5193.85Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPAS--AAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
        MSSIGQSILMALAVTLNKFASSNVQSVQRNKA  TATV+SPIGRR LLLSTVAPAS  AAAA VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPAS--AAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD

Query:  YFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YFEFVEGSVKNKNELSEAEKGI+EWLKRNK
Subjt:  YFEFVEGSVKNKNELSEAEKGIIEWLKRNK

XP_022148828.1 uncharacterized protein LOC111017388 isoform X1 [Momordica charantia]4.1e-4181.25Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYF
        MSSIGQSILMALAVT+NKFASSNVQSV RN++   A  AS IGRRGLL S VA   AA A VDSRTELLKRYLKKSE+NKEKNDKERL+SYYKRNYKDYF
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYF

Query:  EFVEGSVKNKNELSEAEKGIIEWLKRNK
        EFVEGSV+NK+ELSE EK IIEWL+RNK
Subjt:  EFVEGSVKNKNELSEAEKGIIEWLKRNK

XP_022989008.1 uncharacterized protein LOC111486201 [Cucurbita maxima]8.3e-4279.7Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK      T T + +S I RRGLLLS     +A AA VDSRTELLKRYLKKSEENKEKNDKERLES+YKRN
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN

Query:  YKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YKDYFEFVEGS+KNK+ELSEAEKGIIEWLKRNK
Subjt:  YKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

XP_038887440.1 uncharacterized protein LOC120077574 [Benincasa hispida]1.5e-4687.22Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TPTATVASPIGRRGLLLSTVAPASAA-AATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN
        MSSIGQSILMALAVTLNKFASSNVQSVQRN+A    T TAT  S IGRRGLLLS VA A+A     VDSRTELLKRYLKKSEENKEKNDKERLESYYKRN
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKA----TPTATVASPIGRRGLLLSTVAPASAA-AATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN

Query:  YKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
Subjt:  YKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

TrEMBL top hitse value%identityAlignment
A0A1S3C176 uncharacterized protein LOC1034953194.7e-5193.85Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPAS--AAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
        MSSIGQSILMALAVTLNKFASSNVQSVQRNKA  TATV+SPIGRR LLLSTVAPAS  AAAA VDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPAS--AAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD

Query:  YFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YFEFVEGSVKNKNELSEAEKGI+EWLKRNK
Subjt:  YFEFVEGSVKNKNELSEAEKGIIEWLKRNK

A0A6J1D574 uncharacterized protein LOC111017388 isoform X12.0e-4181.25Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYF
        MSSIGQSILMALAVT+NKFASSNVQSV RN++   A  AS IGRRGLL S VA   AA A VDSRTELLKRYLKKSE+NKEKNDKERL+SYYKRNYKDYF
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYF

Query:  EFVEGSVKNKNELSEAEKGIIEWLKRNK
        EFVEGSV+NK+ELSE EK IIEWL+RNK
Subjt:  EFVEGSVKNKNELSEAEKGIIEWLKRNK

A0A6J1EM63 uncharacterized protein LOC1114346153.4e-4178.26Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-ATPTATVA---------SPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLES
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK  TP  T A         S I RRGLLLS     +A AA VDSRTELLKRYLKKSEENKEKNDKERLES
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-ATPTATVA---------SPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLES

Query:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        +YKRNYKDYFEFVEGS+KNK+ELSEAEKGIIEWLKRNK
Subjt:  YYKRNYKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

A0A6J1JNZ7 uncharacterized protein LOC1114862014.0e-4279.7Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN
        MSSIGQ+ILMALA+TLN+FASSNVQSVQRNK      T T + +S I RRGLLLS     +A AA VDSRTELLKRYLKKSEENKEKNDKERLES+YKRN
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNK-----ATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRN

Query:  YKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK
        YKDYFEFVEGS+KNK+ELSEAEKGIIEWLKRNK
Subjt:  YKDYFEFVEGSVKNKNELSEAEKGIIEWLKRNK

W9R137 Uncharacterized protein1.4e-3470.54Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYF
        MSSIGQSILMAL VT+NK+ASSNVQ+V R +  PT    + IGRRGL LSTV    AA    DSRTELLK+YLKKSEENK KNDKERL SYYKRNYKDYF
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYF

Query:  EFVEGSVKNK-NELSEAEKGIIEWLKRNK
        E VEG+++ K  ELSEAEKGI +WL+ NK
Subjt:  EFVEGSVKNK-NELSEAEKGIIEWLKRNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49975.1 INVOLVED IN: photosynthesis; LOCATED IN: photosystem I, chloroplast, thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 34 Blast hits to 34 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1.3e-3262.88Show/hide
Query:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASP--IGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD
        MSSI QSILMAL VT+NK+ASSNVQ+V+RN     +  A P  +GRR +L S+    S  AA + S  +LL++YLKK+EENK KNDKERL+S+YKRNYKD
Subjt:  MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASP--IGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKD

Query:  YFEFVEGSVKNKN--ELSEAEKGIIEWLKRNK
        YFEFVEGS+K K   ELSE+EK I+EWLK NK
Subjt:  YFEFVEGSVKNKN--ELSEAEKGIIEWLKRNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCATCGGCCAAAGCATTCTGATGGCCCTTGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACTCCCACCGCCAC
CGTCGCTTCACCAATTGGAAGAAGAGGCCTCCTCCTGTCCACTGTTGCCCCCGCCTCTGCTGCCGCCGCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGGTACCTCA
AGAAGTCTGAAGAAAACAAAGAAAAGAATGACAAAGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTCGAGTTTGTTGAAGGATCAGTGAAGAATAAG
AACGAACTTTCGGAAGCTGAAAAAGGTATTATTGAGTGGCTTAAACGAAATAAATGA
mRNA sequenceShow/hide mRNA sequence
ACAAATATTAAGTTTGTTAGAATTTGTATTATATGGACCAAGAAAGCCTCATCTGTTGTTGAACCTCATCCTCAAACTGAAAAAAAAAATAAACTATCTATCACTCCCCT
CCCCATGAGTTCCATCGGCCAAAGCATTCTGATGGCCCTTGCCGTCACTCTCAACAAATTTGCTTCTTCCAACGTTCAATCCGTTCAAAGAAACAAAGCCACTCCCACCG
CCACCGTCGCTTCACCAATTGGAAGAAGAGGCCTCCTCCTGTCCACTGTTGCCCCCGCCTCTGCTGCCGCCGCCACGGTCGACTCCAGAACAGAGCTGCTAAAAAGGTAC
CTCAAGAAGTCTGAAGAAAACAAAGAAAAGAATGACAAAGAGAGATTGGAAAGTTACTACAAGCGAAATTACAAAGATTATTTCGAGTTTGTTGAAGGATCAGTGAAGAA
TAAGAACGAACTTTCGGAAGCTGAAAAAGGTATTATTGAGTGGCTTAAACGAAATAAATGAAAGATACTTTTCATTTTTATTTGGATTTATTCATCGATAAGTTTCATCC
ATTGCCATAATTATCACAATAATCTTAATTCAAGGCCTCTAATTTTATTAATTAATAATTGCTTGACTTGTAAAATTTAGAAGCGTGAAAAATAACCAGTGTTGTTCTAG
AGTGGTTTTTGTATCATTTTATTTGTCTTTGTTTACTTAATTTTCCCAAAGTGACTCCATTGAAAAGTCAAAAGCAACTTTTATGAAACTAACCCTTTTCAATTTAAGTT
TTCAAATTTGGTCAGTTTTGAAAATATTTTAAATTCATGTATAAGTTAAATATGTGCATTCGTATCAATTTATATTTTTGTAAGTGTATCAATTTACACAGTTATTTACA
TTCCATTTGAAAAAACTGCATGTGGAGCTTGTAGTTGTATCAATTAAACCTCTGAACTTTTATAAATAAATCAATTTAGCCTCTGTATAATAATTTCCTCTAGGAGTCGT
TCATGCATTTACACTGACCGTTCATTTTGTAAAATCAACATTGGAAGAAGT
Protein sequenceShow/hide protein sequence
MSSIGQSILMALAVTLNKFASSNVQSVQRNKATPTATVASPIGRRGLLLSTVAPASAAAATVDSRTELLKRYLKKSEENKEKNDKERLESYYKRNYKDYFEFVEGSVKNK
NELSEAEKGIIEWLKRNK