; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023358 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023358
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:6729370..6731012
RNA-Seq ExpressionPI0023358
SyntenyPI0023358
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059752.1 F17F8.5 [Cucumis melo var. makuwa]4.4e-8640.7Show/hide
Query:  NRDAGVATDAFWSAIRQEEASLRQKSRV-----------------------------------------------------------VGYRELYPVLEEV
        +  AG+AT+ FW+A+R E+ASLRQKSR+                                                           +GYREL PV++++
Subjt:  NRDAGVATDAFWSAIRQEEASLRQKSRV-----------------------------------------------------------VGYRELYPVLEEV

Query:  VQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPISCCN
        VQF+W+EECC ALQ PI REE+RRV+F+MDS KAPGPDGF  GFFKGAW+ VGEDFCDAV+HFFETCYLP G+NATAITLIPK +GA+R+ED+R ISCCN
Subjt:  VQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPISCCN

Query:  V---------------------------------------------------------------------------------------------------
        V                                                                                                   
Subjt:  V---------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTL
                                                                    FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L
Subjt:  ------------------------------------------------------------FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTL

Query:  PVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        P+RYLG+PLL+GRLR++D A LIQRITSRIRSW+ARVL FAGRLQLVR VLRS QV+WASVFVLPA VHH +D +L+SYLWRGKE GRG
Subjt:  PVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]2.1e-8843.32Show/hide
Query:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------
        MDRAQREVE +  S   +R  G+AT+AFW+A+R EEASLRQKSR+                                                       
Subjt:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------

Query:  ----VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPK
            +GYREL+PV++++VQFRW+EECC ALQ PI REE+RRV+F+MDS KAPGPDGF  GFFKGAW+ V EDFCD V+HFFETCYLP G+NAT ITLIPK
Subjt:  ----VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPK

Query:  RSGADRMEDYRPISCCNVFGE-LSGLIANL----------DKSSMFVAG-----------------------------VDI-------------------
        R GA++ME++RPISCCNV  + +S ++A+              S F+ G                             VD+                   
Subjt:  RSGADRMEDYRPISCCNVFGE-LSGLIANL----------DKSSMFVAG-----------------------------VDI-------------------

Query:  ----------------------------------------------------------EAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQR
                                                                  EAA+ LA SMGF LG LPVRYLG+PLL+GRLR++DCA LIQR
Subjt:  ----------------------------------------------------------EAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQR

Query:  ITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        ITSRIRSW+A VL FAGRLQLVRSVLRS QV+W SVF+LP  VH+ +D +L SYLWRGKE GRG
Subjt:  ITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

KAA0065355.1 F17F8.5 [Cucumis melo var. makuwa]4.0e-7942.17Show/hide
Query:  SRVVGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKR
        S+ +GYREL PV+E++VQFRW+EECC ALQ P  REE+RRV+F+MDS KAP PDGF  GF KGAW+ VGEDFCDAV+HFFETCYLP G+NATAITLIPKR
Subjt:  SRVVGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKR

Query:  SGADRMEDYRPISCCNV-----------------------------------------------------------------------------------
         GA+RME++RPISCCNV                                                                                   
Subjt:  SGADRMEDYRPISCCNV-----------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQ
             FGELSGL  NL KSS+FVA V  EAA+ LA SMGF  G LPVRYLG+PLL GRLR++DCA LIQR+TSRIRSW+A+VL F GRLQLVRSVLRS Q
Subjt:  -----FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQ

Query:  VFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        V+W SVFVLPA VH+ +D +L SYLWRGKE GRG
Subjt:  VFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

TYK26641.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]9.5e-8945.91Show/hide
Query:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------
        MDRAQREVE +  S   +R AG+AT++FW+A+R EEASLRQKSR+                                                       
Subjt:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------

Query:  --VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRS
           GYREL PV++++VQFRW E+CC ALQ PI R+E+RRV+F+MD+ KAPGPDGF  GFFKG W  VGEDFCDAV+HFFETCYLP G+NATAITLIPKRS
Subjt:  --VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRS

Query:  GADRMEDYRPISCCNVF----------------------------------------GELSGLIANL-----------DKSSMFVAGVDIEAAT------
        GA+RMED+RPISCCNV                                          EL GL+  +           D  S F+  + +E  +      
Subjt:  GADRMEDYRPISCCNVF----------------------------------------GELSGLIANL-----------DKSSMFVAGVDIEAAT------

Query:  ------------VLANSMGFA--------------------------LGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRS
                    V  N + FA                          LG LPVRYLG+PLLSGRLR+SDCA LIQRITSRIRSW A+VL FAGRLQL+RS
Subjt:  ------------VLANSMGFA--------------------------LGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRS

Query:  VLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        VLRS QVFWASVFVLP  VH+ +D +L SYLWR KE GRG
Subjt:  VLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

XP_031740402.1 uncharacterized protein LOC116403409 [Cucumis sativus]1.4e-8743.36Show/hide
Query:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------
        MDRA+RE+E +  S E +  A +AT  FW A+R EEA++RQKSR                                                        
Subjt:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------

Query:  ----VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPK
            + Y EL   +EE+VQFRWTEECC ALQ+PI REE+RRV+F+MD  KAPGPDG+  GFFKGAW  VGE FCD V+HFFET Y P G+N TAITLIPK
Subjt:  ----VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPK

Query:  RSGADRMEDYRPISCCNV----------------------------------------------------------------------------------
        R+GADR+ED+ PISCC+V                                                                                  
Subjt:  RSGADRMEDYRPISCCNV----------------------------------------------------------------------------------

Query:  -----------------------FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARV
                               FGELSGL ANL KS +F+ GV+   A+ LA +MGF++G LPVRYLG+PLLS RLR+SDC  LIQRITSRIRSWSARV
Subjt:  -----------------------FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARV

Query:  LFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        L FAGRLQLVRSVLRS QV+WASVF+LP +VH  +D +L +YLWRG E GRG
Subjt:  LFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932255.7e-7942.76Show/hide
Query:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQK-------------------------------SRVVGYRELYPVLEEVVQFRWTEECCL
        MD AQREVE +  S   +R A +AT+ FW+A+R E+    +                                S+ +GYREL P+++++VQF+W+EECC 
Subjt:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQK-------------------------------SRVVGYRELYPVLEEVVQFRWTEECCL

Query:  ALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPISCCNV----------
        ALQ PI REE+RRV+F+MDS KAPGPDGF  GFFKGAW+ +GEDFCDAV+HFFET YLP G+NATAITLIPK +GA+R+ED+RPISCCNV          
Subjt:  ALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPISCCNV----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAG
                          FGELSGL AN  KSS+F+AGV+ E A+ LA  MGF  G LPVRYLG+PLL+GRLR++DC  LIQRITSRIRS SARVL FAG
Subjt:  ------------------FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAG

Query:  RLQLVRSVLRSFQVFWASVFVLPAEVHH
        RLQLV SVL S QV+WA VFVLPA VH+
Subjt:  RLQLVRSVLRSFQVFWASVFVLPAEVHH

A0A5A7UV01 F17F8.52.1e-8640.7Show/hide
Query:  NRDAGVATDAFWSAIRQEEASLRQKSRV-----------------------------------------------------------VGYRELYPVLEEV
        +  AG+AT+ FW+A+R E+ASLRQKSR+                                                           +GYREL PV++++
Subjt:  NRDAGVATDAFWSAIRQEEASLRQKSRV-----------------------------------------------------------VGYRELYPVLEEV

Query:  VQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPISCCN
        VQF+W+EECC ALQ PI REE+RRV+F+MDS KAPGPDGF  GFFKGAW+ VGEDFCDAV+HFFETCYLP G+NATAITLIPK +GA+R+ED+R ISCCN
Subjt:  VQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPISCCN

Query:  V---------------------------------------------------------------------------------------------------
        V                                                                                                   
Subjt:  V---------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTL
                                                                    FGELSGL AN  KSS+FVAGV+ E A+ LA  MGF  G L
Subjt:  ------------------------------------------------------------FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTL

Query:  PVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        P+RYLG+PLL+GRLR++D A LIQRITSRIRSW+ARVL FAGRLQLVR VLRS QV+WASVFVLPA VHH +D +L+SYLWRGKE GRG
Subjt:  PVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein1.0e-8843.32Show/hide
Query:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------
        MDRAQREVE +  S   +R  G+AT+AFW+A+R EEASLRQKSR+                                                       
Subjt:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------

Query:  ----VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPK
            +GYREL+PV++++VQFRW+EECC ALQ PI REE+RRV+F+MDS KAPGPDGF  GFFKGAW+ V EDFCD V+HFFETCYLP G+NAT ITLIPK
Subjt:  ----VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPK

Query:  RSGADRMEDYRPISCCNVFGE-LSGLIANL----------DKSSMFVAG-----------------------------VDI-------------------
        R GA++ME++RPISCCNV  + +S ++A+              S F+ G                             VD+                   
Subjt:  RSGADRMEDYRPISCCNVFGE-LSGLIANL----------DKSSMFVAG-----------------------------VDI-------------------

Query:  ----------------------------------------------------------EAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQR
                                                                  EAA+ LA SMGF LG LPVRYLG+PLL+GRLR++DCA LIQR
Subjt:  ----------------------------------------------------------EAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQR

Query:  ITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        ITSRIRSW+A VL FAGRLQLVRSVLRS QV+W SVF+LP  VH+ +D +L SYLWRGKE GRG
Subjt:  ITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

A0A5A7VHU9 F17F8.51.9e-7942.17Show/hide
Query:  SRVVGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKR
        S+ +GYREL PV+E++VQFRW+EECC ALQ P  REE+RRV+F+MDS KAP PDGF  GF KGAW+ VGEDFCDAV+HFFETCYLP G+NATAITLIPKR
Subjt:  SRVVGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKR

Query:  SGADRMEDYRPISCCNV-----------------------------------------------------------------------------------
         GA+RME++RPISCCNV                                                                                   
Subjt:  SGADRMEDYRPISCCNV-----------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQ
             FGELSGL  NL KSS+FVA V  EAA+ LA SMGF  G LPVRYLG+PLL GRLR++DCA LIQR+TSRIRSW+A+VL F GRLQLVRSVLRS Q
Subjt:  -----FGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQ

Query:  VFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        V+W SVFVLPA VH+ +D +L SYLWRGKE GRG
Subjt:  VFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

A0A5D3DSA8 Putative non-LTR retroelement reverse transcriptase4.6e-8945.91Show/hide
Query:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------
        MDRAQREVE +  S   +R AG+AT++FW+A+R EEASLRQKSR+                                                       
Subjt:  MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRV-------------------------------------------------------

Query:  --VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRS
           GYREL PV++++VQFRW E+CC ALQ PI R+E+RRV+F+MD+ KAPGPDGF  GFFKG W  VGEDFCDAV+HFFETCYLP G+NATAITLIPKRS
Subjt:  --VGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRS

Query:  GADRMEDYRPISCCNVF----------------------------------------GELSGLIANL-----------DKSSMFVAGVDIEAAT------
        GA+RMED+RPISCCNV                                          EL GL+  +           D  S F+  + +E  +      
Subjt:  GADRMEDYRPISCCNVF----------------------------------------GELSGLIANL-----------DKSSMFVAGVDIEAAT------

Query:  ------------VLANSMGFA--------------------------LGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRS
                    V  N + FA                          LG LPVRYLG+PLLSGRLR+SDCA LIQRITSRIRSW A+VL FAGRLQL+RS
Subjt:  ------------VLANSMGFA--------------------------LGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRS

Query:  VLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG
        VLRS QVFWASVFVLP  VH+ +D +L SYLWR KE GRG
Subjt:  VLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRG

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.3e-0732.22Show/hide
Query:  VPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRGVRRLLGW
        +P+L  R+       +++R++SR+  W  + L FAGRL L ++VL S  V   S  +LP  + + LD L  ++LW G    +  + L+ W
Subjt:  VPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRGVRRLLGW

P14381 Transposon TX1 uncharacterized 149 kDa protein1.5e-0730.59Show/hide
Query:  LQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPIS
        L+ PI  +E+ + +  M  +K+PG DG    FF+  W+T+G DF   +   F+   LP       ++L+PK+     ++++RP+S
Subjt:  LQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPIS

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.5e-1843.81Show/hide
Query:  LEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPI
        ++++  FR  +     L A    +EI   VFAM  +KAPGPD F A FF  +W  V +    AV  FF T +L    NATAITLIPK +G D++  +RP+
Subjt:  LEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTVGEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPI

Query:  SCCNV
        SCC V
Subjt:  SCCNV

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.9e-2045.87Show/hide
Query:  VAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLM
        +AGV       + +S  FA G LPVRYLG+PLL+ ++  SD   L+++I  RI  W+AR L FAGRLQL+ SV+ S   FW S F LP+     +DS+  
Subjt:  VAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLM

Query:  SYLWRGKEV
        S+LW G E+
Subjt:  SYLWRGKEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGGCCCAGAGAGAGGTTGAACTGGATCTTGGGTCTGTGGAGAGGAATCGTGATGCGGGTGTTGCGACTGATGCCTTTTGGTCAGCTATCCGTCAGGAAGAAGC
CTCTCTCCGTCAGAAATCACGGGTGGTTGGTTATAGGGAGCTCTATCCTGTGTTGGAGGAGGTGGTTCAGTTTAGGTGGACGGAGGAGTGTTGTCTTGCGTTACAGGCTC
CGATTAGGCGTGAGGAGATCAGGAGGGTGGTTTTTGCTATGGATAGTAGTAAGGCTCCTGGTCCTGATGGTTTTTTGGCAGGCTTCTTCAAGGGTGCTTGGAACACGGTT
GGTGAGGATTTTTGTGATGCTGTGATGCATTTCTTTGAGACGTGTTATCTGCCTCCTGGGATTAATGCTACAGCGATCACCCTCATTCCCAAACGTAGCGGGGCTGATCG
TATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGTTTGGGGAGTTATCGGGGTTAATTGCAAATTTGGATAAGAGCTCTATGTTTGTGGCGGGGGTTGACATTGAGG
CTGCTACTGTGTTGGCTAATAGTATGGGGTTTGCACTGGGTACTTTGCCTGTTCGTTACCTGGGTGTTCCCTTACTCTCTGGTCGTCTGCGTGCTTCAGATTGTGCCTCG
CTCATCCAGCGTATAACTAGTCGGATTCGGTCTTGGTCGGCTAGAGTTTTATTCTTCGCTGGTAGACTTCAGCTTGTGCGTTCGGTGTTACGGAGTTTTCAGGTCTTTTG
GGCCAGTGTGTTTGTTTTGCCGGCTGAGGTGCATCATGCGCTTGATAGTCTTTTGATGTCGTATTTGTGGAGGGGAAAAGAGGTTGGGAGAGGGGTGCGAAGGTTGCTTG
GGTGGATGTGTGTCGCCCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGGCCCAGAGAGAGGTTGAACTGGATCTTGGGTCTGTGGAGAGGAATCGTGATGCGGGTGTTGCGACTGATGCCTTTTGGTCAGCTATCCGTCAGGAAGAAGC
CTCTCTCCGTCAGAAATCACGGGTGGTTGGTTATAGGGAGCTCTATCCTGTGTTGGAGGAGGTGGTTCAGTTTAGGTGGACGGAGGAGTGTTGTCTTGCGTTACAGGCTC
CGATTAGGCGTGAGGAGATCAGGAGGGTGGTTTTTGCTATGGATAGTAGTAAGGCTCCTGGTCCTGATGGTTTTTTGGCAGGCTTCTTCAAGGGTGCTTGGAACACGGTT
GGTGAGGATTTTTGTGATGCTGTGATGCATTTCTTTGAGACGTGTTATCTGCCTCCTGGGATTAATGCTACAGCGATCACCCTCATTCCCAAACGTAGCGGGGCTGATCG
TATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGTTTGGGGAGTTATCGGGGTTAATTGCAAATTTGGATAAGAGCTCTATGTTTGTGGCGGGGGTTGACATTGAGG
CTGCTACTGTGTTGGCTAATAGTATGGGGTTTGCACTGGGTACTTTGCCTGTTCGTTACCTGGGTGTTCCCTTACTCTCTGGTCGTCTGCGTGCTTCAGATTGTGCCTCG
CTCATCCAGCGTATAACTAGTCGGATTCGGTCTTGGTCGGCTAGAGTTTTATTCTTCGCTGGTAGACTTCAGCTTGTGCGTTCGGTGTTACGGAGTTTTCAGGTCTTTTG
GGCCAGTGTGTTTGTTTTGCCGGCTGAGGTGCATCATGCGCTTGATAGTCTTTTGATGTCGTATTTGTGGAGGGGAAAAGAGGTTGGGAGAGGGGTGCGAAGGTTGCTTG
GGTGGATGTGTGTCGCCCGTTAG
Protein sequenceShow/hide protein sequence
MDRAQREVELDLGSVERNRDAGVATDAFWSAIRQEEASLRQKSRVVGYRELYPVLEEVVQFRWTEECCLALQAPIRREEIRRVVFAMDSSKAPGPDGFLAGFFKGAWNTV
GEDFCDAVMHFFETCYLPPGINATAITLIPKRSGADRMEDYRPISCCNVFGELSGLIANLDKSSMFVAGVDIEAATVLANSMGFALGTLPVRYLGVPLLSGRLRASDCAS
LIQRITSRIRSWSARVLFFAGRLQLVRSVLRSFQVFWASVFVLPAEVHHALDSLLMSYLWRGKEVGRGVRRLLGWMCVAR