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PI0023374 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023374
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr06:12290483..12290938
RNA-Seq ExpressionPI0023374
SyntenyPI0023374
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004601 - peroxidase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039128.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.7e-4762.91Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M+F   G+ I+LKGDPS I+A+CSL TLEK+W+E+DQGFLLE  N E E E +YK +  EKG+E D+P ++FLL+QY +IF TP +LPPKR++DH ++TL
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
          QKP+NV+PYKYGHIQK EIEKLV +MLQ G+IRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

KAA0040539.1 uncharacterized protein E6C27_scaffold262G00930 [Cucumis melo var. makuwa]1.2e-4763.58Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M+F  EG+ I+LKGDPS IKA+CSL TLEK+W+EDDQGFLLE  N E E E +YK +  EKG+E D+P ++FLL+QY +IF TP  LPPKR++DH ++TL
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
          Q+P+NV PYKYGHIQK EIE LV +MLQ G+IRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

KAA0061073.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]5.9e-4762.25Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M+F   G+ I+LKGDPS I+A+CSL TLEK+W+E+DQGFLLE  N E E + +YK +  E+G+E D+P ++FLL+QY++IF TP  LPPKR++DH ++TL
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
         +QKP+NV+PYKYGHIQK EIEKLV +MLQ GVIRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

TYK28905.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]9.2e-4864.24Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M F  EGK I+LKGDPS IKA+CSL TLEK+W+EDDQGFLLE  N E E E  YK +  EKG++ D+P ++FLL+QY  IF TP  LPPKR++DH +MT+
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
          Q+P+NV+PYKYGH+QK EIEKLVT+MLQ G+IRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

XP_016901651.1 PREDICTED: uncharacterized protein LOC103495179 [Cucumis melo]2.9e-4660.93Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M F  EG+ I+LKGDPS IKA+CSL+T+EK+WE+DD+GFLLE  NFE   +  Y+ N   +G+E D+P ++FLL QY +IF TP  LPPKRE+D+ ++TL
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
         EQ+P+N +PYKYGH+QK+EIEKLV +MLQ GVIRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

TrEMBL top hitse value%identityAlignment
A0A1S4E096 uncharacterized protein LOC1034951791.4e-4660.93Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M F  EG+ I+LKGDPS IKA+CSL+T+EK+WE+DD+GFLLE  NFE   +  Y+ N   +G+E D+P ++FLL QY +IF TP  LPPKRE+D+ ++TL
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
         EQ+P+N +PYKYGH+QK+EIEKLV +MLQ GVIRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

A0A5A7T8C0 Ty3/gypsy retrotransposon protein1.3e-4762.91Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M+F   G+ I+LKGDPS I+A+CSL TLEK+W+E+DQGFLLE  N E E E +YK +  EKG+E D+P ++FLL+QY +IF TP +LPPKR++DH ++TL
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
          QKP+NV+PYKYGHIQK EIEKLV +MLQ G+IRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

A0A5A7TH07 Uncharacterized protein5.8e-4863.58Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M+F  EG+ I+LKGDPS IKA+CSL TLEK+W+EDDQGFLLE  N E E E +YK +  EKG+E D+P ++FLL+QY +IF TP  LPPKR++DH ++TL
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
          Q+P+NV PYKYGHIQK EIE LV +MLQ G+IRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

A0A5A7UYM1 Ty3/gypsy retrotransposon protein2.9e-4762.25Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M+F   G+ I+LKGDPS I+A+CSL TLEK+W+E+DQGFLLE  N E E + +YK +  E+G+E D+P ++FLL+QY++IF TP  LPPKR++DH ++TL
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
         +QKP+NV+PYKYGHIQK EIEKLV +MLQ GVIRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

A0A5D3DZZ7 Ty3/gypsy retrotransposon protein4.4e-4864.24Show/hide
Query:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL
        M F  EGK I+LKGDPS IKA+CSL TLEK+W+EDDQGFLLE  N E E E  YK +  EKG++ D+P ++FLL+QY  IF TP  LPPKR++DH +MT+
Subjt:  MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTL

Query:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK
          Q+P+NV+PYKYGH+QK EIEKLVT+MLQ G+IRPSRSP+ SPVLL+ +K
Subjt:  LEQKPVNVQPYKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCATGGCTGAAGGAAAAGTGATCATGTTGAAAGGCGATCCTTCACCAATTAAAGCAAAATGCTCTTTAGAAACTTTGGAGAAAAGTTGGGAAGAAGATGACCA
GGGGTTCTTGCTAGAAGTACAGAATTTCGAAGGAGAAGAGGAAGGAAGTTATAAGGGGAATTCGGTAGAAAAAGGAGAGGAGGAAGACTTACCTAATGTACAATTTCTGT
TGAAACAATACCAGGAAATCTTTGCTACACCCACCAACCTTCCACCAAAAAGAGAAGTCGATCACCACATGATGACTCTACTTGAGCAAAAACCAGTCAATGTTCAACCT
TACAAATATGGGCACATTCAGAAGGATGAGATTGAGAAACTTGTCACAAAAATGCTACAAGCGGGAGTAATAAGGCCCAGTCGAAGCCCTTTTCCAAGCCCTGTCCTCTT
GCTTGGTCAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCATGGCTGAAGGAAAAGTGATCATGTTGAAAGGCGATCCTTCACCAATTAAAGCAAAATGCTCTTTAGAAACTTTGGAGAAAAGTTGGGAAGAAGATGACCA
GGGGTTCTTGCTAGAAGTACAGAATTTCGAAGGAGAAGAGGAAGGAAGTTATAAGGGGAATTCGGTAGAAAAAGGAGAGGAGGAAGACTTACCTAATGTACAATTTCTGT
TGAAACAATACCAGGAAATCTTTGCTACACCCACCAACCTTCCACCAAAAAGAGAAGTCGATCACCACATGATGACTCTACTTGAGCAAAAACCAGTCAATGTTCAACCT
TACAAATATGGGCACATTCAGAAGGATGAGATTGAGAAACTTGTCACAAAAATGCTACAAGCGGGAGTAATAAGGCCCAGTCGAAGCCCTTTTCCAAGCCCTGTCCTCTT
GCTTGGTCAAAAATAA
Protein sequenceShow/hide protein sequence
MAFMAEGKVIMLKGDPSPIKAKCSLETLEKSWEEDDQGFLLEVQNFEGEEEGSYKGNSVEKGEEEDLPNVQFLLKQYQEIFATPTNLPPKREVDHHMMTLLEQKPVNVQP
YKYGHIQKDEIEKLVTKMLQAGVIRPSRSPFPSPVLLLGQK