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PI0023381 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023381
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr01:16673947..16674321
RNA-Seq ExpressionPI0023381
SyntenyPI0023381
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038969.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.0e-3670.16Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE   VLTKK W+QLMESPK  I IRENPLFDN TP FDLLEKES LE++S+MMADVTA+ AM E ERKINF MK +++RDHEIA LKDHMKAR+T 
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESS+TP VKA D  K  LQE+Q Q
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

KAA0066644.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.3e-3570.16Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE GSVL KK  +QL+ESPKGGIII++NPLF+N T A +L +KES LEVVSVMMADVTA+  MAEMERKIN+ MK ++ERDHEIAALKD +KA +TA
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESS+TP VKA D  K  LQENQTQ
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

TYK04088.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.3e-3570.16Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE GSVL KK  +QL+ESPKGGIII++NPLF+N T A +L +KES LEVVSVMMADVTA+  MAEMERKIN+ MK ++ERDHEIAALKD +KA +TA
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESS+TP VKA D  K  LQENQTQ
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

TYK04575.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.3e-3570.97Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE G VL KK  +QL+ESPKGGIIIR+NPLF+N TPA +L +KES LEVVSVMM DVTA+  MAEMERKINF MK V+ERDHEIAALKD MKA +T 
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESSQTP VKA D  K  +QENQ Q
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

TYK11178.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.0e-3670.16Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE   VLTKK W+QLMESPK  I IRENPLFDN TP FDLLEKES LE++S+MMADVTA+ AM E ERKINF MK +++RDHEIA LKDHMKAR+T 
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESS+TP VKA D  K  LQE+Q Q
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

TrEMBL top hitse value%identityAlignment
A0A5A7TCF9 Ty3-gypsy retrotransposon protein1.4e-3670.16Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE   VLTKK W+QLMESPK  I IRENPLFDN TP FDLLEKES LE++S+MMADVTA+ AM E ERKINF MK +++RDHEIA LKDHMKAR+T 
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESS+TP VKA D  K  LQE+Q Q
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

A0A5A7VH30 Ty3-gypsy retrotransposon protein3.5e-3570.16Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE GSVL KK  +QL+ESPKGGIII++NPLF+N T A +L +KES LEVVSVMMADVTA+  MAEMERKIN+ MK ++ERDHEIAALKD +KA +TA
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESS+TP VKA D  K  LQENQTQ
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

A0A5D3BYI9 Ty3-gypsy retrotransposon protein3.5e-3570.16Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE GSVL KK  +QL+ESPKGGIII++NPLF+N T A +L +KES LEVVSVMMADVTA+  MAEMERKIN+ MK ++ERDHEIAALKD +KA +TA
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESS+TP VKA D  K  LQENQTQ
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

A0A5D3BZH8 Ty3-gypsy retrotransposon protein3.5e-3570.97Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE G VL KK  +QL+ESPKGGIIIR+NPLF+N TPA +L +KES LEVVSVMM DVTA+  MAEMERKINF MK V+ERDHEIAALKD MKA +T 
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESSQTP VKA D  K  +QENQ Q
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

A0A5D3CJ11 Ty3-gypsy retrotransposon protein1.4e-3670.16Show/hide
Query:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA
        M+ QE   VLTKK W+QLMESPK  I IRENPLFDN TP FDLLEKES LE++S+MMADVTA+ AM E ERKINF MK +++RDHEIA LKDHMKAR+T 
Subjt:  MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTA

Query:  ESSQTPTVKAYDIRKTTLQENQTQ
        ESS+TP VKA D  K  LQE+Q Q
Subjt:  ESSQTPTVKAYDIRKTTLQENQTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTACAAGAACTAGGTTCTGTTCTCACAAAGAAAATTTGGAAACAACTGATGGAATCTCCTAAAGGCGGGATCATCATCAGAGAGAATCCTTTGTTCGACAACCC
TACTCCTGCTTTTGATCTATTAGAGAAAGAATCTCAACTTGAAGTAGTGTCTGTCATGATGGCAGATGTAACCGCTAAGACAGCCATGGCAGAGATGGAAAGGAAAATAA
ATTTCCAAATGAAAGCTGTCAAGGAGCGAGATCATGAAATCGCTGCCTTGAAAGATCATATGAAGGCTCGCAAAACTGCTGAGTCGAGTCAAACTCCTACTGTTAAAGCG
TATGATATAAGAAAAACTACGTTGCAGGAAAACCAAACGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTACAAGAACTAGGTTCTGTTCTCACAAAGAAAATTTGGAAACAACTGATGGAATCTCCTAAAGGCGGGATCATCATCAGAGAGAATCCTTTGTTCGACAACCC
TACTCCTGCTTTTGATCTATTAGAGAAAGAATCTCAACTTGAAGTAGTGTCTGTCATGATGGCAGATGTAACCGCTAAGACAGCCATGGCAGAGATGGAAAGGAAAATAA
ATTTCCAAATGAAAGCTGTCAAGGAGCGAGATCATGAAATCGCTGCCTTGAAAGATCATATGAAGGCTCGCAAAACTGCTGAGTCGAGTCAAACTCCTACTGTTAAAGCG
TATGATATAAGAAAAACTACGTTGCAGGAAAACCAAACGCAATAG
Protein sequenceShow/hide protein sequence
MEVQELGSVLTKKIWKQLMESPKGGIIIRENPLFDNPTPAFDLLEKESQLEVVSVMMADVTAKTAMAEMERKINFQMKAVKERDHEIAALKDHMKARKTAESSQTPTVKA
YDIRKTTLQENQTQ