; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023438 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023438
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description60S ribosomal protein L26
Genome locationchr11:29196944..29197708
RNA-Seq ExpressionPI0023438
SyntenyPI0023438
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148028.1 60S ribosomal protein L26-1 [Cucumis sativus]1.7e-7099.32Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]2.0e-71100Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]2.8e-7097.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022931741.1 60S ribosomal protein L26-1-like [Cucurbita moschata]1.1e-6997.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRK+RKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]8.2e-7095.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A0A0LJI3 KOW domain-containing protein8.0e-7199.32Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A1S3C7Q4 60S ribosomal protein L26-1-like9.5e-72100Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A5A7TS06 60S ribosomal protein L26-1-like9.5e-72100Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1D6T1 60S ribosomal protein L26-1-like1.4e-7097.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHF+APSSVRRILMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1L4P7 60S ribosomal protein L26-1-like4.0e-7095.89Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P12749 60S ribosomal protein L261.6e-4467.61Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R KNRK HF+APS +RR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

P51414 60S ribosomal protein L26-11.3e-6584.93Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRKNRKAHF+A SS RR++MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L263.6e-4467.61Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R KNRK HF+APS +RR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI 
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

Q39411 60S ribosomal protein L264.7e-6079.31Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRR+NRK HF+A SS RR+ MS+PLS DLR KYNVRSMPIRKDDE Q++RGTYKGREGK+ QVYRRK +IHIER+TREKVNG+TVNVG++P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV
        +KV+ITKL+LDKDRKSLL+RKAKGRA+ADKDKGTKFTA D+MQ+V
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-23.1e-6483.56Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRKNRKAHF+APSSVRR+LMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein9.1e-6784.93Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRKNRKAHF+A SS RR++MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein2.2e-6583.56Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRKNRKAHF+APSSVRR+LMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTATAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAATCGCAAGGCTCACTTCTCGGCGCCGTCGAGCGTCCGGCGGATTTTGATGAGTGCGCCCCTCTCCGGCGA
CCTTCGTTCCAAGTACAATGTCCGCTCCATGCCGATCCGCAAGGACGACGAAGTTCAGGTCTTGAGAGGAACTTACAAAGGCCGTGAAGGTAAGGTCGTACAGGTCTACC
GTCGCAAGTGGATCATTCACATTGAGCGCATCACTAGAGAGAAGGTGAATGGCTCCACTGTTAATGTTGGAATTAAGCCGTCAAAGGTTATGATTACGAAGCTCAAGTTG
GATAAGGATAGGAAGTCGTTGCTTGATCGTAAGGCTAAGGGTCGTGCTTCTGCAGATAAGGATAAGGGCACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTA
A
mRNA sequenceShow/hide mRNA sequence
TTACAATCCCCTAAATATAAAATGAACCTTTAAAATTAGGTTTTCTTCCTCTTTGCCTTTGGTTATCTTCAATTCCCTCAGAGACCCAAAAACCCTAATCAATCACAATG
AAGTATAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAATCGCAAGGCTCACTTCTCGGCGCCGTCGAGCGTCCGGCGGATTTTGATGAGTGCGCCCCTCTCCGGCGACCT
TCGTTCCAAGTACAATGTCCGCTCCATGCCGATCCGCAAGGACGACGAAGTTCAGGTCTTGAGAGGAACTTACAAAGGCCGTGAAGGTAAGGTCGTACAGGTCTACCGTC
GCAAGTGGATCATTCACATTGAGCGCATCACTAGAGAGAAGGTGAATGGCTCCACTGTTAATGTTGGAATTAAGCCGTCAAAGGTTATGATTACGAAGCTCAAGTTGGAT
AAGGATAGGAAGTCGTTGCTTGATCGTAAGGCTAAGGGTCGTGCTTCTGCAGATAAGGATAAGGGCACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTAATT
TTAATCTGGTGAAAAATTTTGAAATTTCCTCTTAGTTTTAGTTCTTTCTCTGTTTTGATTTGCTTTTAAACTTGAGGTTTTGTCTTTATTTGTTCTGGAATGAGGAGACA
ATGTTTTATTGTTTTTTAATTTTTATGCTTTGAGTTCTGCCTTTGCTCCCAATACCTGGATTTTTGGTTATTTTTCAATGCAATCATAAAATTCCTTTTTTAATA
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVMITKLKL
DKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD