; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023441 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023441
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr09:7374264..7376707
RNA-Seq ExpressionPI0023441
SyntenyPI0023441
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33754.1 retrotransposon protein [Cucumis melo subsp. melo]9.9e-6936.31Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQW--------
        MDRR FAILCHLLR  AGL STEI+DVEE+VAM LHVL HDVKNRVIQ++F+RSG+T+SRHFN+VLLAVLRL++EL+ +P PVT+ C D +W        
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQW--------

Query:  -------------------------------------------------------------SMTTSSRAPKHHW--------------------------
                                                                     S     + PK ++                          
Subjt:  -------------------------------------------------------------SMTTSSRAPKHHW--------------------------

Query:  ----------------------------------------------------------------------------------------TKEEDATLVE--
                                                                                                T  ED   +E  
Subjt:  ----------------------------------------------------------------------------------------TKEEDATLVE--

Query:  -------------------------CLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITAST-IDCRIKTMKRAFQAISEMKDPSCSGFGWNDE
                                 C +ELVS+GG +S+NGTFRP Y++ L +M+AE++SG  + A+T IDCRIKT+KR FQAI+EM  P+CSGFGWNDE
Subjt:  -------------------------CLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITAST-IDCRIKTMKRAFQAISEMKDPSCSGFGWNDE

Query:  LKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVP-GGYDGFPTYDGNDMKFPTMYS
         KCI+ EK L+D+WV+S  AA GLLN  FP+YD+L YVFGRDRATG  AETF DVGSN P GGYD F   DGN+  FP +YS
Subjt:  LKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVP-GGYDGFPTYDGNDMKFPTMYS

ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]8.3e-6835.71Show/hide
Query:  TTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWS---------------------
        T AGL STE++DVEE+VAM LH+L HDVK+RVI+R+F+RSG+TISRHFN+VLLAV+RL +ELL KPQPV N CTD +W                      
Subjt:  TTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWS---------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------------M
                                                                                                           M
Subjt:  ---------------------------------------------------------------------------------------------------M

Query:  TTSSRAPKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCII
        T+SSR PKH WTKEE+A LVECLVELV+ GG RS+NGTFRP Y++ L +M+A ++ G  I ASTID RIK MKR F A++EM+ P+CSGFGWNDE KCI+
Subjt:  TTSSRAPKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCII

Query:  VEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS
         EK ++D W  SH AA GLLNKSF HYD+L YVFG+DRATGGRAE+F D+GSN P GYD        D  FP MYS
Subjt:  VEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-7840.26Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQW--------
        MDRRCFAILCHLLRT AGL STE++DVEE+VAM LH+L HDVKNRVIQR+F+RSG+TISRHFN+VLLAV+RL DELL KPQPV N CTD +W        
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQW--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------SMTTSSRAPKHHWTKEEDATL
                                                                                       SMT+SSR PKH WTKEE+A  
Subjt:  -------------------------------------------------------------------------------SMTTSSRAPKHHWTKEEDATL

Query:  VECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWVKSHSAANGL
           LVELV+ GG RS+NGTFRP Y++ L +M+A ++ G  I ASTID RIK MKR F A++EM+ P+CSGFGWNDE KCI+ EK ++D W  SH AA GL
Subjt:  VECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWVKSHSAANGL

Query:  LNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS
        LNKSF HYD+L YVFG+DRATGGRAE+F D+GSN P GYD F      D  F  MYS
Subjt:  LNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS

KAA0035078.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-6652.78Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVL-----LAVLRLFDELLAKPQPVTNGCTDAQ--WS
        MDR+ FAI CHLLR  AGL STEI+DVEE+V                  D     D ISR   L +     LA  R     L + + V N  T+A   ++
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVL-----LAVLRLFDELLAKPQPVTNGCTDAQ--WS

Query:  MTTSSR---------APKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITAST-IDCRIKTMKRAFQAISEMKDPSCSG
        M  SS            K  WTKEE+ TLVECL+ELVS+GG +S+NGTFRP Y++ L +M+AE++ G  + A+T IDCRIKT+KR FQAI+EM+ P+CSG
Subjt:  MTTSSR---------APKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITAST-IDCRIKTMKRAFQAISEMKDPSCSG

Query:  FGWNDELKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVP-GGYDGFPTYDGNDMKFPTMYS
        FGWNDE KCII EK L+D+WV+SH  A GLLNK FP+YD+L YVFGRDRATG  AETF D+GSN P GGYD F   DG +  FP MYS
Subjt:  FGWNDELKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVP-GGYDGFPTYDGNDMKFPTMYS

TYK05796.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-6851.65Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWSMTTSSRA
        MDRR FAILCHLL+T +GL STEI+DVEE+VAM LHVL HD+KN VIQR+F+RS +T+SRHFNLVLL V+RL++EL+ +P PVTN C D +W    +   
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWSMTTSSRA

Query:  PKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVS---HLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEK
                 D T ++  V        R+  G    +YV+   + +  + E   GH       +  +        AI+EM  P+CSGFGWNDE KCII EK
Subjt:  PKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVS---HLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEK

Query:  NLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS
         L+D+WV+SH A  GLLNK FP+YD+L YVFGRDRATG   ETFV+VGSN P GYD F   DGN+ +FP +YS
Subjt:  NLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein1.5e-7840.26Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQW--------
        MDRRCFAILCHLLRT AGL STE++DVEE+VAM LH+L HDVKNRVIQR+F+RSG+TISRHFN+VLLAV+RL DELL KPQPV N CTD +W        
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQW--------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------SMTTSSRAPKHHWTKEEDATL
                                                                                       SMT+SSR PKH WTKEE+A  
Subjt:  -------------------------------------------------------------------------------SMTTSSRAPKHHWTKEEDATL

Query:  VECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWVKSHSAANGL
           LVELV+ GG RS+NGTFRP Y++ L +M+A ++ G  I ASTID RIK MKR F A++EM+ P+CSGFGWNDE KCI+ EK ++D W  SH AA GL
Subjt:  VECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWVKSHSAANGL

Query:  LNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS
        LNKSF HYD+L YVFG+DRATGGRAE+F D+GSN P GYD F      D  F  MYS
Subjt:  LNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS

A0A5A7SWU2 Retrotransposon protein7.6e-6752.78Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVL-----LAVLRLFDELLAKPQPVTNGCTDAQ--WS
        MDR+ FAI CHLLR  AGL STEI+DVEE+V                  D     D ISR   L +     LA  R     L + + V N  T+A   ++
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVL-----LAVLRLFDELLAKPQPVTNGCTDAQ--WS

Query:  MTTSSR---------APKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITAST-IDCRIKTMKRAFQAISEMKDPSCSG
        M  SS            K  WTKEE+ TLVECL+ELVS+GG +S+NGTFRP Y++ L +M+AE++ G  + A+T IDCRIKT+KR FQAI+EM+ P+CSG
Subjt:  MTTSSR---------APKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITAST-IDCRIKTMKRAFQAISEMKDPSCSG

Query:  FGWNDELKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVP-GGYDGFPTYDGNDMKFPTMYS
        FGWNDE KCII EK L+D+WV+SH  A GLLNK FP+YD+L YVFGRDRATG  AETF D+GSN P GGYD F   DG +  FP MYS
Subjt:  FGWNDELKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVP-GGYDGFPTYDGNDMKFPTMYS

A0A5D3C620 Retrotransposon protein6.2e-6951.65Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWSMTTSSRA
        MDRR FAILCHLL+T +GL STEI+DVEE+VAM LHVL HD+KN VIQR+F+RS +T+SRHFNLVLL V+RL++EL+ +P PVTN C D +W    +   
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWSMTTSSRA

Query:  PKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVS---HLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEK
                 D T ++  V        R+  G    +YV+   + +  + E   GH       +  +        AI+EM  P+CSGFGWNDE KCII EK
Subjt:  PKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVS---HLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEK

Query:  NLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS
         L+D+WV+SH A  GLLNK FP+YD+L YVFGRDRATG   ETFV+VGSN P GYD F   DGN+ +FP +YS
Subjt:  NLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS

E5GBB2 Retrotransposon protein4.8e-6936.31Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQW--------
        MDRR FAILCHLLR  AGL STEI+DVEE+VAM LHVL HDVKNRVIQ++F+RSG+T+SRHFN+VLLAVLRL++EL+ +P PVT+ C D +W        
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQW--------

Query:  -------------------------------------------------------------SMTTSSRAPKHHW--------------------------
                                                                     S     + PK ++                          
Subjt:  -------------------------------------------------------------SMTTSSRAPKHHW--------------------------

Query:  ----------------------------------------------------------------------------------------TKEEDATLVE--
                                                                                                T  ED   +E  
Subjt:  ----------------------------------------------------------------------------------------TKEEDATLVE--

Query:  -------------------------CLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITAST-IDCRIKTMKRAFQAISEMKDPSCSGFGWNDE
                                 C +ELVS+GG +S+NGTFRP Y++ L +M+AE++SG  + A+T IDCRIKT+KR FQAI+EM  P+CSGFGWNDE
Subjt:  -------------------------CLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITAST-IDCRIKTMKRAFQAISEMKDPSCSGFGWNDE

Query:  LKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVP-GGYDGFPTYDGNDMKFPTMYS
         KCI+ EK L+D+WV+S  AA GLLN  FP+YD+L YVFGRDRATG  AETF DVGSN P GGYD F   DGN+  FP +YS
Subjt:  LKCIIVEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVP-GGYDGFPTYDGNDMKFPTMYS

E5GCB5 Retrotransposon protein4.0e-6835.71Show/hide
Query:  TTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWS---------------------
        T AGL STE++DVEE+VAM LH+L HDVK+RVI+R+F+RSG+TISRHFN+VLLAV+RL +ELL KPQPV N CTD +W                      
Subjt:  TTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWS---------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------------M
                                                                                                           M
Subjt:  ---------------------------------------------------------------------------------------------------M

Query:  TTSSRAPKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCII
        T+SSR PKH WTKEE+A LVECLVELV+ GG RS+NGTFRP Y++ L +M+A ++ G  I ASTID RIK MKR F A++EM+ P+CSGFGWNDE KCI+
Subjt:  TTSSRAPKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCII

Query:  VEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS
         EK ++D W  SH AA GLLNKSF HYD+L YVFG+DRATGGRAE+F D+GSN P GYD        D  FP MYS
Subjt:  VEKNLYDHWVKSHSAANGLLNKSFPHYDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein1.7e-0536.25Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKP
        M   CF  LC++L+T   LQ T  I +EE VAM L +  H+   R +   F R+ +T+ R F  VL A   L  + +  P
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKP

AT2G24960.1 unknown protein2.4e-0420.3Show/hide
Query:  TDAQWSMTTSSRAPKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWN
        ++ + S   +S   +  WT   D  L++ LVE V+ G +     TF     + +      +    +     +  R K ++R +  I  + +   +GF W+
Subjt:  TDAQWSMTTSSRAPKHHWTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWN

Query:  DELKCIIVEKNLYDHW-----------------------VKSHSAANGLLNKSFPHYDDLCYVFGRDRATG-----------GRAETFVDVGSNVPGGYD
             +I + ++++ +                       V++H  A     K+ P Y +LC++FG++ + G             AET   V  N  G  D
Subjt:  DELKCIIVEKNLYDHW-----------------------VKSHSAANGLLNKSFPHYDDLCYVFGRDRATG-----------GRAETFVDVGSNVPGGYD

Query:  GF
        GF
Subjt:  GF

AT4G02210.1 unknown protein3.6e-0821.6Show/hide
Query:  WTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWV
        W    D   ++ +++    G Q    G FR    + +  +   +   ++     +  R K+++R F AI  +      GF W++E + +  + N++  ++
Subjt:  WTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWV

Query:  KSHSAANGLLNKSFPHYDDLCYVFG
        K+H  A   + +  P+Y DLC + G
Subjt:  KSHSAANGLLNKSFPHYDDLCYVFG

AT4G02210.2 unknown protein3.6e-0821.6Show/hide
Query:  WTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWV
        W    D   ++ +++    G Q    G FR    + +  +   +   ++     +  R K+++R F AI  +      GF W++E + +  + N++  ++
Subjt:  WTKEEDATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWV

Query:  KSHSAANGLLNKSFPHYDDLCYVFG
        K+H  A   + +  P+Y DLC + G
Subjt:  KSHSAANGLLNKSFPHYDDLCYVFG

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)3.2e-0939.77Show/hide
Query:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCT
        MD+  F  LC LL+T   L+ T  I +E  +A+ L ++ H+++ R +Q  F  SG+TISRHFN VL AV+ +  +     QP +N  T
Subjt:  MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGACGATGCTTCGCCATTTTATGCCATCTACTAAGGACTACTGCTGGTTTACAGTCTACCGAAATTATCGATGTCGAAGAAATAGTGGCCATGCTCCTTCACGT
ACTTGTGCACGATGTGAAAAATCGTGTCATTCAACGTGACTTCCTACGGTCCGGTGACACGATTTCACGACATTTCAACCTGGTACTGCTGGCTGTTTTACGCCTTTTTG
ACGAGCTGTTGGCGAAACCACAACCGGTGACGAACGGTTGCACAGATGCACAATGGAGTATGACAACTTCTTCAAGGGCCCCAAAGCACCACTGGACGAAAGAGGAGGAT
GCCACCCTCGTTGAATGTTTGGTAGAATTGGTATCAGTTGGTGGGCAGAGGTCGAACAACGGAACGTTTAGACCCGATTACGTTAGTCATCTACAGAAAATGATCGCTGA
GAGGATGTCGGGTCATTACATAACGGCTTCGACCATAGATTGTCGAATAAAGACTATGAAAAGAGCGTTCCAAGCCATATCTGAAATGAAGGACCCATCGTGTAGTGGGT
TCGGTTGGAACGATGAGCTCAAATGCATTATTGTCGAGAAAAACTTGTACGACCATTGGGTGAAGAGTCATTCAGCCGCGAATGGCCTCCTAAACAAATCCTTTCCCCAT
TACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCGAACGTGCCTGGAGGGTACGATGGATTTCCCAC
TTATGACGGGAACGATATGAAGTTCCCCACGATGTACAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAGACGATGCTTCGCCATTTTATGCCATCTACTAAGGACTACTGCTGGTTTACAGTCTACCGAAATTATCGATGTCGAAGAAATAGTGGCCATGCTCCTTCACGT
ACTTGTGCACGATGTGAAAAATCGTGTCATTCAACGTGACTTCCTACGGTCCGGTGACACGATTTCACGACATTTCAACCTGGTACTGCTGGCTGTTTTACGCCTTTTTG
ACGAGCTGTTGGCGAAACCACAACCGGTGACGAACGGTTGCACAGATGCACAATGGAGTATGACAACTTCTTCAAGGGCCCCAAAGCACCACTGGACGAAAGAGGAGGAT
GCCACCCTCGTTGAATGTTTGGTAGAATTGGTATCAGTTGGTGGGCAGAGGTCGAACAACGGAACGTTTAGACCCGATTACGTTAGTCATCTACAGAAAATGATCGCTGA
GAGGATGTCGGGTCATTACATAACGGCTTCGACCATAGATTGTCGAATAAAGACTATGAAAAGAGCGTTCCAAGCCATATCTGAAATGAAGGACCCATCGTGTAGTGGGT
TCGGTTGGAACGATGAGCTCAAATGCATTATTGTCGAGAAAAACTTGTACGACCATTGGGTGAAGAGTCATTCAGCCGCGAATGGCCTCCTAAACAAATCCTTTCCCCAT
TACGACGACCTTTGCTACGTCTTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCGAACGTGCCTGGAGGGTACGATGGATTTCCCAC
TTATGACGGGAACGATATGAAGTTCCCCACGATGTACAGTTAGGTACTGGATATGTCACCTGATGACATGATGACATAATGGGCACACGACCTGGTCGGTTGTCTGAGGG
TAGGACGGGTTCGAGCGGTTCAAAGAGGAAATGACAAGGACAGGCGTTCGAGGCGACAGAAATTATTCGCAATGCCATGGAATATGCGAACGACCAGCTGAAGGCCATTG
CAGAATGGCCCAAAGAACAACGCTAAGATGCAAGCGTGACACATGTGGAAGTCGTTAAACAACTGCAGGGAATCCCGGAGCTGAGTAGACTGGACAGGGTTCGTTGTATG
CGTATAGTGATGCGCAATGTGGATGACATGAAAGCATTTCTAGAAGTCCTGGACGAGCTTAAATTGGATTACTGCACGGTCATTCTCTAAGATACCGCTTGACTGCTTCC
TCACTTTATTCATATGGGTTGTTTTTGTTGCTTTTTATCATTTCCTTGAGGACATTTGCTCGACTTCACTTCGTATTGTAATTCTATTATTGTACGCTTTTTTCCCACTT
TCATAATGAACTTCTGTTTGACTCA
Protein sequenceShow/hide protein sequence
MDRRCFAILCHLLRTTAGLQSTEIIDVEEIVAMLLHVLVHDVKNRVIQRDFLRSGDTISRHFNLVLLAVLRLFDELLAKPQPVTNGCTDAQWSMTTSSRAPKHHWTKEED
ATLVECLVELVSVGGQRSNNGTFRPDYVSHLQKMIAERMSGHYITASTIDCRIKTMKRAFQAISEMKDPSCSGFGWNDELKCIIVEKNLYDHWVKSHSAANGLLNKSFPH
YDDLCYVFGRDRATGGRAETFVDVGSNVPGGYDGFPTYDGNDMKFPTMYS