; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023479 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023479
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBeta-galactosidase
Genome locationchr11:25041943..25046374
RNA-Seq ExpressionPI0023479
SyntenyPI0023479
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038337.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]1.0e-0945.08Show/hide
Query:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQ-PPLTSNYGQPSIPTN---HTSLSFDPLQQPYIR
        G  S  STQPSG+          HAP LSGAWA+  PS +L A P+     SP+    P+ HPP   PP+T+   QPS  +N    T+LS DPLQQP+  
Subjt:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQ-PPLTSNYGQPSIPTN---HTSLSFDPLQQPYIR

Query:  DTKIDQNHNRFGFEVGKSSVQS
            DQ+HNR G E G+SS  S
Subjt:  DTKIDQNHNRFGFEVGKSSVQS

KAA0048797.1 reverse transcriptase [Cucumis melo var. makuwa]2.6e-1043.38Show/hide
Query:  GKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSV------------------------------QDSKLP
        G+SS   +    S  ++ +N+ CAYVSE         I  TSQS+G TASQN P TL VIAQSV                              QDS+ P
Subjt:  GKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSV------------------------------QDSKLP

Query:  RDQSMTNPIESYVDNKISESDRFDVVVPENVEENDM
        +DQ M NPIE+ VDNK+SE+DR+D V+PENVEE D+
Subjt:  RDQSMTNPIESYVDNKISESDRFDVVVPENVEENDM

KAA0060550.1 Integrase, catalytic core [Cucumis melo var. makuwa]6.9e-1136.04Show/hide
Query:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL----SPMCHPC-PTSHPPCQPPLTSNYGQPSIPT---NHTSLSFDPLQQPYIRD
        G PS  S Q SG+          H P L   WAH+PP  +L A P+    S    P  P  HPP   P      QPS  +   N+ +LS DPLQQ +   
Subjt:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL----SPMCHPC-PTSHPPCQPPLTSNYGQPSIPT---NHTSLSFDPLQQPYIRD

Query:  TKIDQNHNRFGFEVGKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSVQDSKLPRDQSMTNPIESYV
         + DQ+H+R G E G+SS  + S +   +++ +N+GC  V ET          STSQ  G TASQ S PTL  IAQS     + ++     P ++ V
Subjt:  TKIDQNHNRFGFEVGKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSVQDSKLPRDQSMTNPIESYV

KAA0061289.1 hypothetical protein E6C27_scaffold455G001330 [Cucumis melo var. makuwa]6.9e-1133.06Show/hide
Query:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRD
        G PS  S QPSG+        + HAP LSG WA++PPS +L A P+     SP+    P+ HPP   P  +   QPS  +N    T+LS DPLQQP+   
Subjt:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRD

Query:  TKIDQNHNRFGFEVGKSSVQS---------------------------KSTSLSMYSQH-----KNTGCAYVSETASTSQSSL-----------------
           DQ+HNR G E G+S V S                             T L MYS++      N    Y++ + + S  SL                 
Subjt:  TKIDQNHNRFGFEVGKSSVQS---------------------------KSTSLSMYSQH-----KNTGCAYVSETASTSQSSL-----------------

Query:  ------------IASTSQSSGATASQNSPPTLEVIAQSVQDSKLP
                      STSQ  G TASQ S  TL  IAQS   S  P
Subjt:  ------------IASTSQSSGATASQNSPPTLEVIAQSVQDSKLP

TYJ97057.1 Beta-galactosidase [Cucumis melo var. makuwa]1.0e-0945.08Show/hide
Query:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQ-PPLTSNYGQPSIPTN---HTSLSFDPLQQPYIR
        G  S  STQPSG+          HAP LSGAWA+  PS +L A P+     SP+    P+ HPP   PP+T+   QPS  +N    T+LS DPLQQP+  
Subjt:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQ-PPLTSNYGQPSIPTN---HTSLSFDPLQQPYIR

Query:  DTKIDQNHNRFGFEVGKSSVQS
            DQ+HNR G E G+SS  S
Subjt:  DTKIDQNHNRFGFEVGKSSVQS

TrEMBL top hitse value%identityAlignment
A0A5A7TBP7 Beta-galactosidase1.2e-0833.74Show/hide
Query:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSH-PPCQPP---------LTSNYGQPSIPT-----NHTSL
        G PS SS QPSG+          HAP  S AWAH PP  +L A P+     SP+    P+ H PP   P         L+S Y   S+ +     + T+L
Subjt:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSH-PPCQPP---------LTSNYGQPSIPT-----NHTSL

Query:  SFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQS----------------------KSTSLS-----MYSQH-----KNTGCAYVSETASTSQSSL-----
        S DPLQQP+    + DQ+HNR G E G+SS  S                       S SL+     MYS++      N    Y++ + + S  SL     
Subjt:  SFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQS----------------------KSTSLS-----MYSQH-----KNTGCAYVSETASTSQSSL-----

Query:  -----------------IASTSQSSGATASQNSPPTLEVIAQS
                          ASTSQ  G TASQ S PTL  IAQS
Subjt:  -----------------IASTSQSSGATASQNSPPTLEVIAQS

A0A5A7V6G9 Reverse transcriptase Ty1/copia-type domain-containing protein3.4e-1133.06Show/hide
Query:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRD
        G PS  S QPSG+        + HAP LSG WA++PPS +L A P+     SP+    P+ HPP   P  +   QPS  +N    T+LS DPLQQP+   
Subjt:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRD

Query:  TKIDQNHNRFGFEVGKSSVQS---------------------------KSTSLSMYSQH-----KNTGCAYVSETASTSQSSL-----------------
           DQ+HNR G E G+S V S                             T L MYS++      N    Y++ + + S  SL                 
Subjt:  TKIDQNHNRFGFEVGKSSVQS---------------------------KSTSLSMYSQH-----KNTGCAYVSETASTSQSSL-----------------

Query:  ------------IASTSQSSGATASQNSPPTLEVIAQSVQDSKLP
                      STSQ  G TASQ S  TL  IAQS   S  P
Subjt:  ------------IASTSQSSGATASQNSPPTLEVIAQSVQDSKLP

A0A5D3BVA8 TMV resistance protein N8.3e-1041.35Show/hide
Query:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPP--------CQPP--LTSNYGQPSIPT-----NHTSL
        G PS  S QPSG+          HAP LS AWAH PPS +L A P+     SP+    P+ HPP         Q P  L+S Y   S+ +     + T+L
Subjt:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPP--------CQPP--LTSNYGQPSIPT-----NHTSL

Query:  SFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQS
        S DPLQQP+    + DQ+HNR G E G+SS  S
Subjt:  SFDPLQQPYIRDTKIDQNHNRFGFEVGKSSVQS

A0A5D3CAC0 Beta-galactosidase1.2e-0836.76Show/hide
Query:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRD
        G P   S Q SG+          HA  LSGAWAH     +LIA P+     SP+    P+ HPP      +   QPS  +N     +L  DPLQQP+   
Subjt:  GLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPL-----SPMCHPCPTSHPPCQPPLTSNYGQPSIPTN---HTSLSFDPLQQPYIRD

Query:  TKIDQNHNRFGFEVGKSSVQS---------------------------KSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEV
         + +Q+HNR   EVG+ S  S                             T L MYS++ N G   V ETASTSQ  LI       G TAS+ S PTL V
Subjt:  TKIDQNHNRFGFEVGKSSVQS---------------------------KSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEV

Query:  IAQS
        IAQS
Subjt:  IAQS

A0A5D3DBU1 Reverse transcriptase1.3e-1043.38Show/hide
Query:  GKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSV------------------------------QDSKLP
        G+SS   +    S  ++ +N+ CAYVSE         I  TSQS+G TASQN P TL VIAQSV                              QDS+ P
Subjt:  GKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSV------------------------------QDSKLP

Query:  RDQSMTNPIESYVDNKISESDRFDVVVPENVEENDM
        +DQ M NPIE+ VDNK+SE+DR+D V+PENVEE D+
Subjt:  RDQSMTNPIESYVDNKISESDRFDVVVPENVEENDM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCGGTCACAACTGGCCTACCCTCGGAGTCATCCACGCAACCCAGTGGTAAGAATCTGCCCCATGCAACTTTTCTTGCCGCTCACGCGCCATCTCTGTCAGGCGC
GTGGGCCCACTTACCACCCTCCAATCATCTTATTGCCAGCCCATTGTCTCCCATGTGTCATCCCTGTCCAACCTCACACCCTCCTTGTCAGCCACCGCTAACCTCCAATT
ACGGACAACCGTCAATTCCGACAAACCACACTTCCCTGTCTTTTGATCCTTTACAGCAGCCATATATTCGTGATACCAAAATCGACCAAAACCACAACAGATTTGGGTTT
GAAGTTGGCAAATCCTCGGTGCAATCTAAATCAACCAGCTTATCGATGTATTCCCAGCACAAGAACACAGGGTGTGCCTATGTGAGTGAGACTGCCAGCACCTCTCAGTC
GTCTCTCATTGCAAGCACCTCTCAGTCGTCTGGTGCTACCGCAAGCCAAAATAGTCCTCCCACTCTAGAAGTCATTGCTCAGTCAGTCCAAGACTCTAAACTTCCTCGAG
ATCAAAGTATGACAAATCCTATTGAATCTTATGTTGATAATAAAATAAGTGAAAGTGACAGGTTTGATGTTGTTGTTCCTGAAAATGTGGAAGAAAATGATATGGTGATA
AGACTAAGGTCAGAGCACAAACCAGTGGCTTTTAACCGAAAAGAGGAGTGGTCAGGCGACGAAGCGCTAGGTGAGAAATTATGCGAACAAGTAGGAGATCATCAACGCAA
AGCTACACGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGCGGTCACAACTGGCCTACCCTCGGAGTCATCCACGCAACCCAGTGGTAAGAATCTGCCCCATGCAACTTTTCTTGCCGCTCACGCGCCATCTCTGTCAGGCGC
GTGGGCCCACTTACCACCCTCCAATCATCTTATTGCCAGCCCATTGTCTCCCATGTGTCATCCCTGTCCAACCTCACACCCTCCTTGTCAGCCACCGCTAACCTCCAATT
ACGGACAACCGTCAATTCCGACAAACCACACTTCCCTGTCTTTTGATCCTTTACAGCAGCCATATATTCGTGATACCAAAATCGACCAAAACCACAACAGATTTGGGTTT
GAAGTTGGCAAATCCTCGGTGCAATCTAAATCAACCAGCTTATCGATGTATTCCCAGCACAAGAACACAGGGTGTGCCTATGTGAGTGAGACTGCCAGCACCTCTCAGTC
GTCTCTCATTGCAAGCACCTCTCAGTCGTCTGGTGCTACCGCAAGCCAAAATAGTCCTCCCACTCTAGAAGTCATTGCTCAGTCAGTCCAAGACTCTAAACTTCCTCGAG
ATCAAAGTATGACAAATCCTATTGAATCTTATGTTGATAATAAAATAAGTGAAAGTGACAGGTTTGATGTTGTTGTTCCTGAAAATGTGGAAGAAAATGATATGGTGATA
AGACTAAGGTCAGAGCACAAACCAGTGGCTTTTAACCGAAAAGAGGAGTGGTCAGGCGACGAAGCGCTAGGTGAGAAATTATGCGAACAAGTAGGAGATCATCAACGCAA
AGCTACACGATTTTGA
Protein sequenceShow/hide protein sequence
MLAVTTGLPSESSTQPSGKNLPHATFLAAHAPSLSGAWAHLPPSNHLIASPLSPMCHPCPTSHPPCQPPLTSNYGQPSIPTNHTSLSFDPLQQPYIRDTKIDQNHNRFGF
EVGKSSVQSKSTSLSMYSQHKNTGCAYVSETASTSQSSLIASTSQSSGATASQNSPPTLEVIAQSVQDSKLPRDQSMTNPIESYVDNKISESDRFDVVVPENVEENDMVI
RLRSEHKPVAFNRKEEWSGDEALGEKLCEQVGDHQRKATRF