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PI0023491 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023491
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:2750865..2751485
RNA-Seq ExpressionPI0023491
SyntenyPI0023491
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.1e-5460.25Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        M+VG+G  CRVWLDPWL GG I+ Q+GERV+YD AS REARLS+FI  +GEW W RVS EL++LWERVQ V PCLS+ D WVW+PGRQG FSI+SAWEAI
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTRDRLSRWDSSIPRSCLLYQGV
        C    +V W GLLW GGNIP+HSFCAWL I+DR    + +  R+  W   +  S + ++G+
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTRDRLSRWDSSIPRSCLLYQGV

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]2.3e-6268.59Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        +EVGDG  CRVWLDPWL G  I+ Q+GERV+YD AS REARLSEFIG DGEW+W RVS EL++LW+RVQ VRPCLS+ DRWVW+PG QG FSI+SA + I
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQG
             +V W GLLWGGGN+P+HSFCAWL I+++LGTRDRL RWDSS+P S +L QG
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQG

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]1.4e-6257.71Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        M+VG+G   RVWLDPWL  G I+ Q+GERV+YD AS R+ARLS+FI  DGEW W RVS EL++LWERVQ V PCLS+ D WVW+PGR+G FSI+SAWEA+
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQGVLSLGIICFFPVLLGMISGLVLFGLWRPLIGLRGGRLSCLGSVV
             +V W GLLWGGGNI +H FCAWL I+DRLGT DRL RWDSS+P  C+L+                        FG W PLIGL  G LSCLG V+
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQGVLSLGIICFFPVLLGMISGLVLFGLWRPLIGLRGGRLSCLGSVV

Query:  R
        +
Subjt:  R

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]2.3e-5459.63Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        M+VG+G  CRVWLDPWL GG I+ Q+GERV+YD AS REARLS+FI  +GEW W RVS EL++LWERVQ V PCL++ D WVW+PGRQG FSI+SAWEAI
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTRDRLSRWDSSIPRSCLLYQGV
        C    +V W GLLW GGNIP+HSFCAWL I+DR    + +  R+  W   +  S + ++G+
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTRDRLSRWDSSIPRSCLLYQGV

XP_031737556.1 uncharacterized protein LOC116402448 [Cucumis sativus]3.6e-5564.71Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        MEVG+G+ CRVWLDP + GG II+Q GERV+YD  S R+ARL +F+G DG+WRWS VS +L+++W+R+QGVRP  S+ D WV +PG    FSI SA EAI
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL
           S +V W+GLLWGGGNIP+HSF  WL I+DRLGTRDRLSRWDSSIP SC+L
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein5.1e-5560.25Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        M+VG+G  CRVWLDPWL GG I+ Q+GERV+YD AS REARLS+FI  +GEW W RVS EL++LWERVQ V PCLS+ D WVW+PGRQG FSI+SAWEAI
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTRDRLSRWDSSIPRSCLLYQGV
        C    +V W GLLW GGNIP+HSFCAWL I+DR    + +  R+  W   +  S + ++G+
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTRDRLSRWDSSIPRSCLLYQGV

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein1.1e-6268.59Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        +EVGDG  CRVWLDPWL G  I+ Q+GERV+YD AS REARLSEFIG DGEW+W RVS EL++LW+RVQ VRPCLS+ DRWVW+PG QG FSI+SA + I
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQG
             +V W GLLWGGGN+P+HSFCAWL I+++LGTRDRL RWDSS+P S +L QG
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQG

A0A5A7V3Z0 Reverse transcriptase domain-containing protein6.7e-6357.71Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        M+VG+G   RVWLDPWL  G I+ Q+GERV+YD AS R+ARLS+FI  DGEW W RVS EL++LWERVQ V PCLS+ D WVW+PGR+G FSI+SAWEA+
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQGVLSLGIICFFPVLLGMISGLVLFGLWRPLIGLRGGRLSCLGSVV
             +V W GLLWGGGNI +H FCAWL I+DRLGT DRL RWDSS+P  C+L+                        FG W PLIGL  G LSCLG V+
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQGVLSLGIICFFPVLLGMISGLVLFGLWRPLIGLRGGRLSCLGSVV

Query:  R
        +
Subjt:  R

A0A5D3BDZ6 Zf-RVT domain-containing protein1.1e-5459.63Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI
        M+VG+G  CRVWLDPWL GG I+ Q+GERV+YD AS REARLS+FI  +GEW W RVS EL++LWERVQ V PCL++ D WVW+PGRQG FSI+SAWEAI
Subjt:  MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAI

Query:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTRDRLSRWDSSIPRSCLLYQGV
        C    +V W GLLW GGNIP+HSFCAWL I+DR    + +  R+  W   +  S + ++G+
Subjt:  CSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTRDRLSRWDSSIPRSCLLYQGV

A0A5D3CLU1 Non-LTR retroelement reverse transcriptase-like protein1.3e-5363.82Show/hide
Query:  DGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAICSMS
        D R  R W    +  G I+ Q+GERV+YD AS REARLS+FIG +GEW WSRV  EL+ LW+RVQ V PCLS+ D WVW+PGRQG FSI+SAW+AI    
Subjt:  DGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAICSMS

Query:  EKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQG
         +V W GLLWGG NIP+HSFCAWL I+DRLGTRDRL RWDSS+P  C+L +G
Subjt:  EKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.5e-1429.75Show/hide
Query:  VGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRW----SRVSRELLELWERVQGVRPCLSIGDRWVWIPGR---QGEFSISS
        +G+GR    W D W   G +I+ MG+     +     AR+ E +G++G W+     S  ++ + +    +    P  +I D + W+ G    QG FS + 
Subjt:  VGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRW----SRVSRELLELWERVQGVRPCLSIGDRWVWIPGR---QGEFSISS

Query:  AWEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL
         W+AI   + ++ WA  +W  G +P+H+F  W+   DRL TR RL+ W       C L
Subjt:  AWEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-0834.92Show/hide
Query:  EFSISSAWEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCL
        +   ++ W  +  + E+V W   +W  G IP+H+F AW+ +R RL T+DR+  W    P  CL
Subjt:  EFSISSAWEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCL

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.2e-0925.85Show/hide
Query:  EVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVR-PCLSIGDRWVWIPGR----QGEFSISSA
        ++ +G     W D W   G +I   G R   D+  +  A ++E + ++   R  R    LL + + +  VR   L+ G+  V   G     +  F+    
Subjt:  EVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVR-PCLSIGDRWVWIPGR----QGEFSISSA

Query:  WEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQGVLSLGIICFF--------PVLLGMISGLVLFGLWRPLIGL
        W A      KV W   +W     P++S  AW+ I++RL T DR+  W++    SC+L   ++      FF        P L      L L  LW+   G 
Subjt:  WEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQGVLSLGIICFF--------PVLLGMISGLVLFGLWRPLIGL

Query:  RGGRL
        R G +
Subjt:  RGGRL

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.3e-1731.25Show/hide
Query:  EVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSR-----ELLELWERVQGVRPCLSIGDRWVW---IPGRQGEFSI
        EVG G   + W D W+  G +I  +G      V    +A + + +     W  S  SR     +L  L    QG+  C    D ++W   +      FS 
Subjt:  EVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSR-----ELLELWERVQGVRPCLSIGDRWVW---IPGRQGEFSI

Query:  SSAWEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL
           W A+   S  V W   +W   ++P+H+F  W+V  +RL TRDRL  W  SIP  CLL
Subjt:  SSAWEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.1e-1730.67Show/hide
Query:  EVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSI--------GDRWVW-IPGRQGEFS
        +VG G  C  W + W + G +I   G+         R A +++ +  DG W W   SR    + + ++   P  S+         D ++W + G +    
Subjt:  EVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSI--------GDRWVW-IPGRQGEFS

Query:  ISSA--WEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL
         SSA  W  +  + EKV W   +W  G IP+H+F +W+ IR RL TRD+L  W   +P  CLL
Subjt:  ISSA--WEAICSMSEKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGAACGATCATTCGGCAGATGGGCGAGCGAGTGGTGTATGATGTTGCGAGTAG
TAGGGAGGCTAGGCTTTCTGAGTTCATTGGCTTGGATGGCGAGTGGAGGTGGTCGAGGGTTTCTAGGGAGTTGCTTGAGTTGTGGGAGAGGGTTCAGGGCGTCCGTCCTT
GTTTGAGTATTGGGGATCGCTGGGTGTGGATTCCGGGTCGTCAGGGTGAGTTCTCGATTTCGAGTGCGTGGGAGGCTATTTGTTCTATGAGTGAAAAGGTTTGTTGGGCT
GGTCTGCTGTGGGGTGGGGGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCGGGATAGGTTGAGTAGGTGGGATAGTTCGAT
TCCTCGATCGTGTCTTCTTTACCAGGGGGTGTTGAGTCTCGGGATCATCTGTTTTTTTCCTGTCCTTTTGGGTATGATATCTGGACTCGTATTATTCGGGTTATGGCGTC
CTCTCATAGGGTTAAGGGGTGGGAGGTTGAGTTGTCTTGGGTCAGTCGTAAGGGTATTGGGAAGGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGAACGATCATTCGGCAGATGGGCGAGCGAGTGGTGTATGATGTTGCGAGTAG
TAGGGAGGCTAGGCTTTCTGAGTTCATTGGCTTGGATGGCGAGTGGAGGTGGTCGAGGGTTTCTAGGGAGTTGCTTGAGTTGTGGGAGAGGGTTCAGGGCGTCCGTCCTT
GTTTGAGTATTGGGGATCGCTGGGTGTGGATTCCGGGTCGTCAGGGTGAGTTCTCGATTTCGAGTGCGTGGGAGGCTATTTGTTCTATGAGTGAAAAGGTTTGTTGGGCT
GGTCTGCTGTGGGGTGGGGGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCGGGATAGGTTGAGTAGGTGGGATAGTTCGAT
TCCTCGATCGTGTCTTCTTTACCAGGGGGTGTTGAGTCTCGGGATCATCTGTTTTTTTCCTGTCCTTTTGGGTATGATATCTGGACTCGTATTATTCGGGTTATGGCGTC
CTCTCATAGGGTTAAGGGGTGGGAGGTTGAGTTGTCTTGGGTCAGTCGTAAGGGTATTGGGAAGGGTGTGA
Protein sequenceShow/hide protein sequence
MEVGDGRCCRVWLDPWLHGGTIIRQMGERVVYDVASSREARLSEFIGLDGEWRWSRVSRELLELWERVQGVRPCLSIGDRWVWIPGRQGEFSISSAWEAICSMSEKVCWA
GLLWGGGNIPRHSFCAWLVIRDRLGTRDRLSRWDSSIPRSCLLYQGVLSLGIICFFPVLLGMISGLVLFGLWRPLIGLRGGRLSCLGSVVRVLGRV