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PI0023505 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023505
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr11:12994089..12994877
RNA-Seq ExpressionPI0023505
SyntenyPI0023505
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.7e-9475.47Show/hide
Query:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT
        M +  KD+E  +PSSKE   P ASL+KV S HA L  SE PL  S KQ +  PEPSQWVGEKVVSNFFQKTALCMWEDI+DKIMRTPFEYIPRLR EIAT
Subjt:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT

Query:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE
        VLSGI KI AD LT LEEYLNSYLKRVDNFNDVQSSY AQL  T+K RQL+EKTSAIKE L L+ QL+ DAKVIQER  +LSLE+KELE RLQ IN ESE
Subjt:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE

Query:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        QLSILSCEK +AID++ELE+A+LQDE N LESTPAITEEA EALATV +SMEAAR+EF+NFKW+L
Subjt:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]1.6e-9576.6Show/hide
Query:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT
        M +  KD+E  +PSSKE   P ASL+KV STHA LK SE PL  S KQ +  PEPSQWVGEKVVSNFFQKTALCMWEDI+DKIMRTPFEYIPRLR EIAT
Subjt:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT

Query:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE
        VLSGI KI AD LT LEEYLNSYLKRVDNFNDVQSSY AQL LT+K RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSLE+KELE RLQ IN ESE
Subjt:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE

Query:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        QLSILS EK EAID++ELE+A+LQDE N LESTPAI EEA EALATVR+SMEAA +EF+NFKW+L
Subjt:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

KAA0057576.1 hypothetical protein E6C27_scaffold497G00480 [Cucumis melo var. makuwa]8.6e-9474.34Show/hide
Query:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT
        M +  KD+E  +PSSKE     ASL+KV S HA LK SE PL  S KQ +  PEPSQWVGEKVVSNFFQKT LCMWEDI+DKIMRTPFEYIPRLR +IAT
Subjt:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT

Query:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE
        V SGI KI AD LT LEEYLNSYLKRVDNFNDVQSSY AQL  T+K RQL+EKTSAIKEAL L+ QL+ DAKVIQE+  +LSLE+KELE RLQ IN ESE
Subjt:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE

Query:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        QLSILSCEK EAID++ELE+A+LQDE N LESTPAITEE  EA+ATVR+SMEAAR+EF+NFKW+L
Subjt:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]1.1e-9376.68Show/hide
Query:  KSNPSSKEPTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIATVLSGIAKIQADN
        K +   KEP   L+KV STHA LK SE PLD S + I   PEPSQWVGEKVV NFF+KTALCMWEDI+DKIMRTPFEYIPRLR EIATVLSGI KI  + 
Subjt:  KSNPSSKEPTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIATVLSGIAKIQADN

Query:  LTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESEQLSILSCEKNEA
        LTPLEEYLNSYLKRVDNFNDVQSSY AQLL T+K RQLDEKTSAI+EAL LM++L+EDA VIQERA QLSLEKKELE RLQ +N ESEQLSILSCEK EA
Subjt:  LTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESEQLSILSCEKNEA

Query:  IDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        I ++ELE+A+LQDE N LE TPAITEE  EALA VR+SMEAAR+EF+NFKWKL
Subjt:  IDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]4.6e-9575.47Show/hide
Query:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT
        M + EKD+E  +P SKE   P ASL+KV S HA LK SE PL  S K+    PEPSQWVGEKVVSNFFQKTALCMWEDI+DKIMRT FEYIPRLR EIAT
Subjt:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT

Query:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE
        VLSGI KI AD LT LEEYLNSYLKRVDNFNDVQSSY AQLL T+K RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSLE+KELE RLQ IN ESE
Subjt:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE

Query:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        QLSILSCEK EAID++ELE+A+LQDE N LESTPAI EEA EALAT+R+SMEA R+EF+NFKW+L
Subjt:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein8.4e-9575.47Show/hide
Query:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT
        M +  KD+E  +PSSKE   P ASL+KV S HA L  SE PL  S KQ +  PEPSQWVGEKVVSNFFQKTALCMWEDI+DKIMRTPFEYIPRLR EIAT
Subjt:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT

Query:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE
        VLSGI KI AD LT LEEYLNSYLKRVDNFNDVQSSY AQL  T+K RQL+EKTSAIKE L L+ QL+ DAKVIQER  +LSLE+KELE RLQ IN ESE
Subjt:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE

Query:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        QLSILSCEK +AID++ELE+A+LQDE N LESTPAITEEA EALATV +SMEAAR+EF+NFKW+L
Subjt:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

A0A5A7U8X8 PMD domain-containing protein7.6e-9676.6Show/hide
Query:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT
        M +  KD+E  +PSSKE   P ASL+KV STHA LK SE PL  S KQ +  PEPSQWVGEKVVSNFFQKTALCMWEDI+DKIMRTPFEYIPRLR EIAT
Subjt:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT

Query:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE
        VLSGI KI AD LT LEEYLNSYLKRVDNFNDVQSSY AQL LT+K RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSLE+KELE RLQ IN ESE
Subjt:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE

Query:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        QLSILS EK EAID++ELE+A+LQDE N LESTPAI EEA EALATVR+SMEAA +EF+NFKW+L
Subjt:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

A0A5A7UTW5 Uncharacterized protein4.2e-9474.34Show/hide
Query:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT
        M +  KD+E  +PSSKE     ASL+KV S HA LK SE PL  S KQ +  PEPSQWVGEKVVSNFFQKT LCMWEDI+DKIMRTPFEYIPRLR +IAT
Subjt:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT

Query:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE
        V SGI KI AD LT LEEYLNSYLKRVDNFNDVQSSY AQL  T+K RQL+EKTSAIKEAL L+ QL+ DAKVIQE+  +LSLE+KELE RLQ IN ESE
Subjt:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE

Query:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        QLSILSCEK EAID++ELE+A+LQDE N LESTPAITEE  EA+ATVR+SMEAAR+EF+NFKW+L
Subjt:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

A0A5A7V3X5 PMD domain-containing protein5.4e-9476.68Show/hide
Query:  KSNPSSKEPTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIATVLSGIAKIQADN
        K +   KEP   L+KV STHA LK SE PLD S + I   PEPSQWVGEKVV NFF+KTALCMWEDI+DKIMRTPFEYIPRLR EIATVLSGI KI  + 
Subjt:  KSNPSSKEPTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIATVLSGIAKIQADN

Query:  LTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESEQLSILSCEKNEA
        LTPLEEYLNSYLKRVDNFNDVQSSY AQLL T+K RQLDEKTSAI+EAL LM++L+EDA VIQERA QLSLEKKELE RLQ +N ESEQLSILSCEK EA
Subjt:  LTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESEQLSILSCEKNEA

Query:  IDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        I ++ELE+A+LQDE N LE TPAITEE  EALA VR+SMEAAR+EF+NFKWKL
Subjt:  IDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

A0A5D3BW91 Uncharacterized protein2.2e-9575.47Show/hide
Query:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT
        M + EKD+E  +P SKE   P ASL+KV S HA LK SE PL  S K+    PEPSQWVGEKVVSNFFQKTALCMWEDI+DKIMRT FEYIPRLR EIAT
Subjt:  MKLNEKDVEKSNPSSKE---PTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIAT

Query:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE
        VLSGI KI AD LT LEEYLNSYLKRVDNFNDVQSSY AQLL T+K RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSLE+KELE RLQ IN ESE
Subjt:  VLSGIAKIQADNLTPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESE

Query:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL
        QLSILSCEK EAID++ELE+A+LQDE N LESTPAI EEA EALAT+R+SMEA R+EF+NFKW+L
Subjt:  QLSILSCEKNEAIDKKELEIAQLQDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGAATGAAAAAGATGTTGAAAAATCAAATCCTTCGTCCAAAGAACCCACAGCGTCTTTAGAGAAGGTCAAATCCACACATGCGTCTCTCAAGATTTCTGAGCC
GCCTTTAGACACTTCGAGGAAGCAGATAGTAGGACCTCCTGAGCCCTCTCAGTGGGTTGGTGAAAAGGTAGTGTCAAACTTCTTTCAGAAAACGGCCTTATGCATGTGGG
AGGACATTCGAGACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGTCGGAAATAGCAACGGTTCTTTCAGGAATTGCAAAGATCCAAGCAGATAATTTG
ACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAGGGTAGACAACTTCAATGATGTACAATCTTCATATTTCGCACAACTGCTGTTGACGAATAAAACTCGCCAATT
GGACGAGAAGACATCTGCCATCAAAGAAGCCTTGGCTTTGATGGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAGGGCTACGCAGTTATCCTTGGAAAAGAAAG
AACTGGAGAGCAGACTTCAGATTATAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAAATGAGGCCATAGATAAGAAGGAATTGGAGATTGCTCAGCTC
CAAGATGAAGCCAATGCTCTTGAAAGCACCCCTGCTATTACCGAAGAAGCCACTGAGGCCTTAGCTACTGTTCGTAAGAGTATGGAGGCCGCACGCAAAGAATTCAGGAA
CTTCAAGTGGAAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGAATGAAAAAGATGTTGAAAAATCAAATCCTTCGTCCAAAGAACCCACAGCGTCTTTAGAGAAGGTCAAATCCACACATGCGTCTCTCAAGATTTCTGAGCC
GCCTTTAGACACTTCGAGGAAGCAGATAGTAGGACCTCCTGAGCCCTCTCAGTGGGTTGGTGAAAAGGTAGTGTCAAACTTCTTTCAGAAAACGGCCTTATGCATGTGGG
AGGACATTCGAGACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGTCGGAAATAGCAACGGTTCTTTCAGGAATTGCAAAGATCCAAGCAGATAATTTG
ACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAGGGTAGACAACTTCAATGATGTACAATCTTCATATTTCGCACAACTGCTGTTGACGAATAAAACTCGCCAATT
GGACGAGAAGACATCTGCCATCAAAGAAGCCTTGGCTTTGATGGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAGGGCTACGCAGTTATCCTTGGAAAAGAAAG
AACTGGAGAGCAGACTTCAGATTATAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAAATGAGGCCATAGATAAGAAGGAATTGGAGATTGCTCAGCTC
CAAGATGAAGCCAATGCTCTTGAAAGCACCCCTGCTATTACCGAAGAAGCCACTGAGGCCTTAGCTACTGTTCGTAAGAGTATGGAGGCCGCACGCAAAGAATTCAGGAA
CTTCAAGTGGAAGCTTTGA
Protein sequenceShow/hide protein sequence
MKLNEKDVEKSNPSSKEPTASLEKVKSTHASLKISEPPLDTSRKQIVGPPEPSQWVGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRSEIATVLSGIAKIQADNL
TPLEEYLNSYLKRVDNFNDVQSSYFAQLLLTNKTRQLDEKTSAIKEALALMDQLQEDAKVIQERATQLSLEKKELESRLQIINTESEQLSILSCEKNEAIDKKELEIAQL
QDEANALESTPAITEEATEALATVRKSMEAARKEFRNFKWKL