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PI0023534 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023534
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description(6-4)DNA photolyase
Genome locationchr01:27285793..27286458
RNA-Seq ExpressionPI0023534
SyntenyPI0023534
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461069.1 PREDICTED: uncharacterized protein LOC103499770 [Cucumis melo]7.0e-5189.34Show/hide
Query:  MATNLAVFHPAPIRASSS-SSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAE-QSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFH
        MATN AVFHP PIRASSS SSGKS+PNRR  A PKWWSPIFGWSSEPDYVVSS AE QS+QNA  ELDGGRT SRFAPGCFTEEKAKLLRMKTLESSTFH
Subjt:  MATNLAVFHPAPIRASSS-SSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAE-QSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFH

Query:  DIMYHSAIASRLASDLSDRSKK
        DIMYHSAIASRLASDLSDRSKK
Subjt:  DIMYHSAIASRLASDLSDRSKK
XP_022960101.1 uncharacterized protein LOC111460952 [Cucurbita moschata]8.6e-4985Show/hide
Query:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI
        MATNL VFH APIRA  SSSGKSEPNRRK AAPKWWSPIFGWSSEPDY+ SS A+Q +QNA  ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRSKK
        MYHSAIASRLASDLSDRSK+
Subjt:  MYHSAIASRLASDLSDRSKK
XP_023004861.1 uncharacterized protein LOC111498038 [Cucurbita maxima]8.6e-4985Show/hide
Query:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI
        MATNL VFH APIRA  SSSGKSEPNRRK AAPKWWSPIFGWSSEPDY+ SS A+Q +QNA  ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRSKK
        MYHSAIASRLASDLSDRSK+
Subjt:  MYHSAIASRLASDLSDRSKK
XP_023514525.1 uncharacterized protein LOC111778781 [Cucurbita pepo subsp. pepo]1.5e-4885Show/hide
Query:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI
        MATNL VFH APIRA  SSSGKSEPNRRK AAPKWWSPIFGWSSEPDY+ SS A+Q +QNA  ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRSKK
        MYHSAIASRLASDLSDRSK+
Subjt:  MYHSAIASRLASDLSDRSKK
XP_038898524.1 uncharacterized protein LOC120086132 [Benincasa hispida]1.3e-5290.83Show/hide
Query:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI
        MATNLAVFHPAPIRA  SSSGKSEPNRRK  APKWWSPIFGWSSEPDYV+SS AEQS+ NA  EL+GGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRSKK
        MYHSAIASRLASDLSDRSKK
Subjt:  MYHSAIASRLASDLSDRSKK
TrEMBL top hitse value%identityAlignment
A0A0A0K8X0 Uncharacterized protein2.7e-4884.92Show/hide
Query:  MATNLAVFHPAPIRA-----SSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAE-QSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLES
        MATN AVFHPAPI A     SSSSSGK +PNR   AAPKWWSPIFGWSSEPDYVVSS AE QSIQNA  EL GGR RSRFAPGCFTEEKAKLLRMKT ES
Subjt:  MATNLAVFHPAPIRA-----SSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAE-QSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLES

Query:  STFHDIMYHSAIASRLASDLSDRSKK
        STFHDIMYHSAIASRLASDLSDRSKK
Subjt:  STFHDIMYHSAIASRLASDLSDRSKK
A0A1S3CEC0 uncharacterized protein LOC1034997703.4e-5189.34Show/hide
Query:  MATNLAVFHPAPIRASSS-SSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAE-QSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFH
        MATN AVFHP PIRASSS SSGKS+PNRR  A PKWWSPIFGWSSEPDYVVSS AE QS+QNA  ELDGGRT SRFAPGCFTEEKAKLLRMKTLESSTFH
Subjt:  MATNLAVFHPAPIRASSS-SSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAE-QSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFH

Query:  DIMYHSAIASRLASDLSDRSKK
        DIMYHSAIASRLASDLSDRSKK
Subjt:  DIMYHSAIASRLASDLSDRSKK
A0A5D3CF29 Uncharacterized protein3.4e-5189.34Show/hide
Query:  MATNLAVFHPAPIRASSS-SSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAE-QSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFH
        MATN AVFHP PIRASSS SSGKS+PNRR  A PKWWSPIFGWSSEPDYVVSS AE QS+QNA  ELDGGRT SRFAPGCFTEEKAKLLRMKTLESSTFH
Subjt:  MATNLAVFHPAPIRASSS-SSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAE-QSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFH

Query:  DIMYHSAIASRLASDLSDRSKK
        DIMYHSAIASRLASDLSDRSKK
Subjt:  DIMYHSAIASRLASDLSDRSKK
A0A6J1H6P9 uncharacterized protein LOC1114609524.2e-4985Show/hide
Query:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI
        MATNL VFH APIRA  SSSGKSEPNRRK AAPKWWSPIFGWSSEPDY+ SS A+Q +QNA  ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRSKK
        MYHSAIASRLASDLSDRSK+
Subjt:  MYHSAIASRLASDLSDRSKK
A0A6J1KTB2 uncharacterized protein LOC1114980384.2e-4985Show/hide
Query:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI
        MATNL VFH APIRA  SSSGKSEPNRRK AAPKWWSPIFGWSSEPDY+ SS A+Q +QNA  ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRSKK
        MYHSAIASRLASDLSDRSK+
Subjt:  MYHSAIASRLASDLSDRSKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein4.3e-2247.17Show/hide
Query:  PIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLA
        P   +SS SG   P++ +  +  WW+P+FG  S+PDY+    +  ++     ++ G  +  +F  GCFTEEKAK LR KT E+STFHD+MYHSAIASRLA
Subjt:  PIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLA

Query:  SDLSDR
        SD++ R
Subjt:  SDLSDR
AT3G15630.1 unknown protein3.3e-2252.17Show/hide
Query:  MATNLAVFHPAPIRASSSSSGKSEPNRRKP-AAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHD
        MAT ++    + IRASS    +S+P R+KP ++  WW+P+FG SSEPDYV  +V        +LE D  +   R    C TEEKAK LR KT E+STFHD
Subjt:  MATNLAVFHPAPIRASSSSSGKSEPNRRKP-AAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHD

Query:  IMYHSAIASRLASDL
        +MYHSAIASRLASD+
Subjt:  IMYHSAIASRLASDL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCAATTTAGCCGTTTTTCATCCCGCTCCGATCAGAGCTTCTTCTTCTTCTTCAGGAAAATCAGAACCTAATCGCCGGAAGCCCGCCGCGCCGAAGTGGTGGTC
GCCGATCTTCGGCTGGTCATCCGAACCGGACTACGTTGTTTCTTCCGTCGCGGAACAATCCATTCAGAATGCCCATCTGGAGCTCGACGGTGGAAGAACCAGATCCAGAT
TTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAACTACTCCGAATGAAAACGCTGGAAAGCTCTACTTTCCATGATATTATGTACCATTCGGCGATCGCATCGCGTCTC
GCTTCCGATTTGTCGGACCGAAGCAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
CTACATTTTTGCTTCTCTCACATGGCCACCAATTTAGCCGTTTTTCATCCCGCTCCGATCAGAGCTTCTTCTTCTTCTTCAGGAAAATCAGAACCTAATCGCCGGAAGCC
CGCCGCGCCGAAGTGGTGGTCGCCGATCTTCGGCTGGTCATCCGAACCGGACTACGTTGTTTCTTCCGTCGCGGAACAATCCATTCAGAATGCCCATCTGGAGCTCGACG
GTGGAAGAACCAGATCCAGATTTGCACCTGGATGCTTCACGGAGGAGAAGGCGAAACTACTCCGAATGAAAACGCTGGAAAGCTCTACTTTCCATGATATTATGTACCAT
TCGGCGATCGCATCGCGTCTCGCTTCCGATTTGTCGGACCGAAGCAAGAAATAGATAGATCTACGAAGATTTGGCGCAGTGAGGTATTGTATTGTGTTTTTGGAAATCTG
TATCTGTACTGCCTTTTTTCTGTAAATCTTCATAAAAATTTGGGGAAGGAAGTAAATCTTCATTTCCTGATAAATTTACATCTTCATTTTGCCTTTTAGACCGTTTAGAT
TAAGGAAACTTCATACCTACTGCAACTATTTTCCATCTGATTATTGATTGACGACGATTGATTTGAATTTGTTTTCTCATTATCATCGGTCTGATTTGCATCTTGATGTC
GACGGC
Protein sequenceShow/hide protein sequence
MATNLAVFHPAPIRASSSSSGKSEPNRRKPAAPKWWSPIFGWSSEPDYVVSSVAEQSIQNAHLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRL
ASDLSDRSKK