; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023544 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023544
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:8112143..8113204
RNA-Seq ExpressionPI0023544
SyntenyPI0023544
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]2.2e-2839.59Show/hide
Query:  LQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFF
        ++  VV  FY A +N +E   E+  K V F  +AIN LY L N+    GH    +P  +  ++A E IIW G  W+ M TEKYQL P+ L TE SVWL F
Subjt:  LQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFF

Query:  IKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIPGDLCSSVALNRMITLHVHK
        IKK I PT HDSTI++E +MLLY      + N  ++    +++W++ P  A PF    + L +K  P L    Q+ +   +C    L+R IT+H +K
Subjt:  IKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIPGDLCSSVALNRMITLHVHK

KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]3.7e-3133.56Show/hide
Query:  VLKRKEEKKQMLTELREQLEELPAKCKALGVERDNLK-----VIAEEFEDELEAMSPIDQ---GPPPKKQR-----EVVEPSKGKKVGASGPEEPQASNE
        V ++ +EK + L +   +++      KAL  E+   K       ++EFE ELE +SP++       PKK+R     + ++  K  K      E  ++  E
Subjt:  VLKRKEEKKQMLTELREQLEELPAKCKALGVERDNLK-----VIAEEFEDELEAMSPIDQ---GPPPKKQR-----EVVEPSKGKKVGASGPEEPQASNE

Query:  AKTKAPLIHTIIKIENGLFSFNGTLPDFLAS-IQTFGWKKFFKRHAKLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYV
            A  +     IE G+F F G LP FL S I+   WK+FF+    ++  V+  FY   +NT+     + GK V+F  + +N LY L     T  +   
Subjt:  AKTKAPLIHTIIKIENGLFSFNGTLPDFLAS-IQTFGWKKFFKRHAKLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYV

Query:  VSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWM
          P+    + A E + W G  W+I   +KYQL PH L T ASVWL FIKK + PT HD+TI+LE +MLLYCI+++  +N+ ++I   I +W+
Subjt:  VSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWM

KAA0049609.1 transposase [Cucumis melo var. makuwa]1.2e-2950.35Show/hide
Query:  ISGKAVSFSAEAINDLYDLPND-AETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVML
        +  + V F+ E IN+LYDLPND    PG   +V   +  A++  ++I+W  A      T + QL PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++
Subjt:  ISGKAVSFSAEAINDLYDLPND-AETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVML

Query:  LYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVK
        LYCI  K   NLG ++    LSWMR PK+A PFP+TV+ LC+K
Subjt:  LYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVK

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]3.1e-3846.67Show/hide
Query:  KLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTE-KYQLHPHQLTTEASVWL
        K++M VV  FY  K N  +  I I  +   F+ E IN+LY+ PNDAE  G E V   TK +A+EA +++ W G   E+   + +YQL+PH LTT+A+VW+
Subjt:  KLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTE-KYQLHPHQLTTEASVWL

Query:  FFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIP
        FF K KIFPTC+DSTI+++  ++LYCI+ K  +NL ++I   IL+WM  PK+AMPFPS +E LC+K +P L    +  IP
Subjt:  FFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIP

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.2e-2950.35Show/hide
Query:  ISGKAVSFSAEAINDLYDLPND-AETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVML
        +  + V F+ E IN+LYDLPND    PG   +V   +  A++  ++I+W  A      T + QL PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++
Subjt:  ISGKAVSFSAEAINDLYDLPND-AETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVML

Query:  LYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVK
        LYCI  K   NLG ++    LSWMR PK+A PFP+TV+ LC+K
Subjt:  LYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVK

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like1.8e-3133.56Show/hide
Query:  VLKRKEEKKQMLTELREQLEELPAKCKALGVERDNLK-----VIAEEFEDELEAMSPIDQ---GPPPKKQR-----EVVEPSKGKKVGASGPEEPQASNE
        V ++ +EK + L +   +++      KAL  E+   K       ++EFE ELE +SP++       PKK+R     + ++  K  K      E  ++  E
Subjt:  VLKRKEEKKQMLTELREQLEELPAKCKALGVERDNLK-----VIAEEFEDELEAMSPIDQ---GPPPKKQR-----EVVEPSKGKKVGASGPEEPQASNE

Query:  AKTKAPLIHTIIKIENGLFSFNGTLPDFLAS-IQTFGWKKFFKRHAKLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYV
            A  +     IE G+F F G LP FL S I+   WK+FF+    ++  V+  FY   +NT+     + GK V+F  + +N LY L     T  +   
Subjt:  AKTKAPLIHTIIKIENGLFSFNGTLPDFLAS-IQTFGWKKFFKRHAKLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYV

Query:  VSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWM
          P+    + A E + W G  W+I   +KYQL PH L T ASVWL FIKK + PT HD+TI+LE +MLLYCI+++  +N+ ++I   I +W+
Subjt:  VSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWM

A0A5A7U806 Transposase5.7e-3050.35Show/hide
Query:  ISGKAVSFSAEAINDLYDLPND-AETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVML
        +  + V F+ E IN+LYDLPND    PG   +V   +  A++  ++I+W  A      T + QL PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++
Subjt:  ISGKAVSFSAEAINDLYDLPND-AETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVML

Query:  LYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVK
        LYCI  K   NLG ++    LSWMR PK+A PFP+TV+ LC+K
Subjt:  LYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVK

A0A5A7V6M5 Gag/pol protein1.5e-3846.67Show/hide
Query:  KLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTE-KYQLHPHQLTTEASVWL
        K++M VV  FY  K N  +  I I  +   F+ E IN+LY+ PNDAE  G E V   TK +A+EA +++ W G   E+   + +YQL+PH LTT+A+VW+
Subjt:  KLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTE-KYQLHPHQLTTEASVWL

Query:  FFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIP
        FF K KIFPTC+DSTI+++  ++LYCI+ K  +NL ++I   IL+WM  PK+AMPFPS +E LC+K +P L    +  IP
Subjt:  FFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIP

A0A5D3CVL7 Uncharacterized protein5.7e-3050.35Show/hide
Query:  ISGKAVSFSAEAINDLYDLPND-AETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVML
        +  + V F+ E IN+LYDLPND    PG   +V   +  A++  ++I+W  A      T + QL PHQLT EA+VWLFFIKKKIFPT HDSTI  E  ++
Subjt:  ISGKAVSFSAEAINDLYDLPND-AETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVML

Query:  LYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVK
        LYCI  K   NLG ++    LSWMR PK+A PFP+TV+ LC+K
Subjt:  LYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVK

A0A5D3CW17 Uncharacterized protein1.1e-2839.59Show/hide
Query:  LQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFF
        ++  VV  FY A +N +E   E+  K V F  +AIN LY L N+    GH    +P  +  ++A E IIW G  W+ M TEKYQL P+ L TE SVWL F
Subjt:  LQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTEKYQLHPHQLTTEASVWLFF

Query:  IKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIPGDLCSSVALNRMITLHVHK
        IKK I PT HDSTI++E +MLLY      + N  ++    +++W++ P  A PF    + L +K  P L    Q+ +   +C    L+R IT+H +K
Subjt:  IKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIPGDLCSSVALNRMITLHVHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGATAAAAACAGTCCTGAAGAGGAAGGAAGAGAAGAAGCAAATGCTCACAGAGTTGCGCGAGCAATTGGAGGAACTCCCTGCGAAGTGCAAGGCACTAGGAGT
AGAAAGAGACAACCTCAAAGTCATTGCTGAGGAATTCGAGGACGAGCTGGAGGCGATGAGTCCAATTGATCAGGGGCCACCGCCTAAGAAACAAAGGGAGGTCGTCGAAC
CATCCAAAGGAAAGAAAGTTGGGGCATCTGGACCTGAAGAGCCCCAAGCAAGCAATGAAGCCAAAACGAAAGCGCCTTTAATTCACACCATCATAAAAATTGAGAATGGG
CTTTTTTCGTTTAATGGCACACTCCCAGACTTCCTCGCGTCAATCCAGACGTTTGGATGGAAGAAATTTTTTAAACGGCACGCCAAGTTACAGATGGGTGTGGTCAAGAA
CTTTTACGCTGCTAAGCTGAATACTGATGAGTTTAGCATAGAGATTAGTGGGAAGGCGGTGAGCTTCAGCGCGGAGGCCATCAACGACCTATACGACCTACCCAATGATG
CTGAAACGCCTGGGCATGAGTATGTGGTCAGTCCAACAAAGAAAATGGCTCGTGAAGCGTCGGAGATCATCATTTGGCTTGGGGCGACATGGGAAATTATGTCAACTGAG
AAATATCAACTTCACCCACACCAACTGACTACTGAAGCAAGTGTGTGGTTGTTCTTCATCAAAAAGAAAATATTTCCCACGTGCCATGATAGTACCATCAATTTGGAATC
TGTGATGCTACTGTACTGCATCCTGAAGAAATGGCGCATGAACCTCGGCGATTTGATAGCTACTACCATCCTTTCTTGGATGCGAGCTCCCAAGGATGCCATGCCCTTCC
CATCCACTGTGGAGGCACTCTGTGTGAAGGTCGTCCCTTTTCTATGCGTCGTTAATCAAATGCCTATTCCAGGCGACCTATGCAGTTCAGTGGCTTTGAATCGCATGATT
ACTCTCCACGTCCACAAAGAGGGTGAGACTCAAGTAGACCCTCGCAAAAGGAAAGCCCCTACCACCGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGATAAAAACAGTCCTGAAGAGGAAGGAAGAGAAGAAGCAAATGCTCACAGAGTTGCGCGAGCAATTGGAGGAACTCCCTGCGAAGTGCAAGGCACTAGGAGT
AGAAAGAGACAACCTCAAAGTCATTGCTGAGGAATTCGAGGACGAGCTGGAGGCGATGAGTCCAATTGATCAGGGGCCACCGCCTAAGAAACAAAGGGAGGTCGTCGAAC
CATCCAAAGGAAAGAAAGTTGGGGCATCTGGACCTGAAGAGCCCCAAGCAAGCAATGAAGCCAAAACGAAAGCGCCTTTAATTCACACCATCATAAAAATTGAGAATGGG
CTTTTTTCGTTTAATGGCACACTCCCAGACTTCCTCGCGTCAATCCAGACGTTTGGATGGAAGAAATTTTTTAAACGGCACGCCAAGTTACAGATGGGTGTGGTCAAGAA
CTTTTACGCTGCTAAGCTGAATACTGATGAGTTTAGCATAGAGATTAGTGGGAAGGCGGTGAGCTTCAGCGCGGAGGCCATCAACGACCTATACGACCTACCCAATGATG
CTGAAACGCCTGGGCATGAGTATGTGGTCAGTCCAACAAAGAAAATGGCTCGTGAAGCGTCGGAGATCATCATTTGGCTTGGGGCGACATGGGAAATTATGTCAACTGAG
AAATATCAACTTCACCCACACCAACTGACTACTGAAGCAAGTGTGTGGTTGTTCTTCATCAAAAAGAAAATATTTCCCACGTGCCATGATAGTACCATCAATTTGGAATC
TGTGATGCTACTGTACTGCATCCTGAAGAAATGGCGCATGAACCTCGGCGATTTGATAGCTACTACCATCCTTTCTTGGATGCGAGCTCCCAAGGATGCCATGCCCTTCC
CATCCACTGTGGAGGCACTCTGTGTGAAGGTCGTCCCTTTTCTATGCGTCGTTAATCAAATGCCTATTCCAGGCGACCTATGCAGTTCAGTGGCTTTGAATCGCATGATT
ACTCTCCACGTCCACAAAGAGGGTGAGACTCAAGTAGACCCTCGCAAAAGGAAAGCCCCTACCACCGCATAA
Protein sequenceShow/hide protein sequence
MEAIKTVLKRKEEKKQMLTELREQLEELPAKCKALGVERDNLKVIAEEFEDELEAMSPIDQGPPPKKQREVVEPSKGKKVGASGPEEPQASNEAKTKAPLIHTIIKIENG
LFSFNGTLPDFLASIQTFGWKKFFKRHAKLQMGVVKNFYAAKLNTDEFSIEISGKAVSFSAEAINDLYDLPNDAETPGHEYVVSPTKKMAREASEIIIWLGATWEIMSTE
KYQLHPHQLTTEASVWLFFIKKKIFPTCHDSTINLESVMLLYCILKKWRMNLGDLIATTILSWMRAPKDAMPFPSTVEALCVKVVPFLCVVNQMPIPGDLCSSVALNRMI
TLHVHKEGETQVDPRKRKAPTTA