CuGenDBv2

Gene ID	PI0023562
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome location	tig00003626:759827..760304
RNA-Seq Expression	PI0023562
Synteny	PI0023562
Gene Ontology terms	GO:0009536 - plastid (cellular component) GO:0016020 - membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR001268 - NADH:ubiquinone oxidoreductase, 30kDa subunit IPR020396 - NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site IPR037232 - NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88883.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria]

2.8e-44

63.29

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M G+LSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

QHB75966.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. melo]

7.3e-45

63.92

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

YP_004841786.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. melo]

3.3e-45

64.56

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            KIPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

YP_009236283.1 NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum]

2.8e-44

63.29

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M G+LSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

YP_009751741.1 NADH dehydrogenase subunit J [Herpetospermum pedunculosum]

2.8e-44

63.29

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M G+LSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU07 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.6e-45

64.56

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            KIPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

A0A249RXS5 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.6e-45

64.56

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            KIPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

A0A249RZ18 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.6e-45

64.56

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            KIPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

A0A249RZ69 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.6e-45

64.56

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            KIPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

A0A286NFY1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.6e-45

64.56

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            KIPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGISY+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

SwissProt top hits

e value

%identity

Alignment

A0ZZ38 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.4e-45

60.76

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M G LS WLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYG+DQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKS+DF ERESYDMLGISYENHPRLKRILMPESW+GWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

B1A938 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.6e-45

60.76

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M G+LS WLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYG+DQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADF ERESYDMLGISY+NHPRLKRILMPESW+GWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

B5LML3 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

3.4e-45

60.13

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLS+WLVK G++                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEY +DQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADF ERESYDMLGISY+NHPRLKRILMPESW+GWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

Q0ZJ17 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.5e-45

60.76

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M G LS+WLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYG+DQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADF ERESYDMLGISY+NHPRLKRILMPESW+GWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.8e-47

63.29

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M GNLSSWLVK GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYGIDQPEE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKSADFPERESYDMLGI Y+NHPRLKRILMPESWVGWPLRKD IAPNF EI+DAH
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

Arabidopsis top hits

e value

%identity

Alignment

ATCG00420.1 NADH dehydrogenase subunit J

3.6e-42

56.33

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Query:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-
        M G LS WL K GL+                      S+  I+YV       ++CAYDVAPGGLLASVYHLTRIEYG++Q EE            +IPS 
Subjt:  MLGNLSSWLVKDGLI----------------------SMVTIIYV------PNECAYDVAPGGLLASVYHLTRIEYGIDQPEE-----------RKIPS-

Query:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH
         WVWKS DF ERESYDMLGI+Y++HPRLKRILMPESW+GWPLRKD IAPNF EI+DA+
Subjt:  -WVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNFDEIEDAH

ATMG00070.1 NADH dehydrogenase subunit 9

2.7e-05

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Query:  LASVYHLTRIEYGIDQPEERKIPSWV--WKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKD
        L S  + +RI       E  +I   V  + SA   ERE +DM G+S+ NHP L+RI     + G PLRKD
Subjt:  LASVYHLTRIEYGIDQPEERKIPSWV--WKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKD

Sequences

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CDS sequence

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ATGCTGGGTAATTTGTCTTCTTGGCTAGTCAAAGATGGACTGATTTCTATGGTGACAATTATTTACGTTCCCAATGAATGTGCTTATGATGTAGCACCAGGCGGACTCTT
AGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGAGAAAAATTCCCTCTTGGGTTTGGAAAAGTGCTGATTTTCCAGAAAGGGAATCTT
ATGATATGTTGGGAATTTCTTATGAAAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCTTTACGTAAGGATGATATTGCCCCCAATTTT
GATGAAATAGAAGATGCTCATTAA

mRNA sequence

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Protein sequence

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MLGNLSSWLVKDGLISMVTIIYVPNECAYDVAPGGLLASVYHLTRIEYGIDQPEERKIPSWVWKSADFPERESYDMLGISYENHPRLKRILMPESWVGWPLRKDDIAPNF
DEIEDAH

PI0023562 (gene) of Melon (PI 482460) v1 genome