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PI0023566 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023566
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr02:16200278..16201184
RNA-Seq ExpressionPI0023566
SyntenyPI0023566
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]4.2e-1358.73Show/hide
Query:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLSS
        LY+ P DAETP  + + +  +R   E LE IAW GA +++TPTGKY LYPHQLT EASVWL S
Subjt:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLSS

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]1.1e-0852.54Show/hide
Query:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASV
        LYDLP DAETP Q  + +  +R  RE L+ I W G   ++T TG Y LYPH+LTT+AS+
Subjt:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASV

KAA0062748.1 hypothetical protein E6C27_scaffold382G00810 [Cucumis melo var. makuwa]5.7e-1047.3Show/hide
Query:  GRTSLQRGGHQALYDLPNDAET-PGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWL
        G+ S        LY+LP+DA+  P Q + + P   + + +L+VI W GA WE  PTG+ QLYPHQLT EA+VWL
Subjt:  GRTSLQRGGHQALYDLPNDAET-PGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWL

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-0753.23Show/hide
Query:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL
        LY+ PNDAE  GQ  V   T+ + +E L+V+AWPG   EV P   +YQLYPH LTT+A+VW+
Subjt:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]1.8e-0851.61Show/hide
Query:  LYDLPNDAET-PGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWL
        LY L ND ++ P Q  +  PT+  +R ++++IAW GA W  T T   QLYPHQLTTEA+VWL
Subjt:  LYDLPNDAET-PGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWL

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein2.0e-1358.73Show/hide
Query:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLSS
        LY+ P DAETP  + + +  +R   E LE IAW GA +++TPTGKY LYPHQLT EASVWL S
Subjt:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLSS

A0A5A7URT6 Uncharacterized protein5.2e-0952.54Show/hide
Query:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASV
        LYDLP DAETP Q  + +  +R  RE L+ I W G   ++T TG Y LYPH+LTT+AS+
Subjt:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASV

A0A5A7V6M5 Gag/pol protein5.8e-0853.23Show/hide
Query:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL
        LY+ PNDAE  GQ  V   T+ + +E L+V+AWPG   EV P   +YQLYPH LTT+A+VW+
Subjt:  LYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWL

A0A5D3CBF2 Uncharacterized protein2.8e-1047.3Show/hide
Query:  GRTSLQRGGHQALYDLPNDAET-PGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWL
        G+ S        LY+LP+DA+  P Q + + P   + + +L+VI W GA WE  PTG+ QLYPHQLT EA+VWL
Subjt:  GRTSLQRGGHQALYDLPNDAET-PGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWL

A0A5D3DES7 Uncharacterized protein8.9e-0951.61Show/hide
Query:  LYDLPNDAET-PGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWL
        LY L ND ++ P Q  +  PT+  +R ++++IAW GA W  T T   QLYPHQLTTEA+VWL
Subjt:  LYDLPNDAET-PGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACACCTCAAGAGGACAAAGGAAGCTCGTCGCAGGAAGGACGAGCCTTCAACGCGGAGGCCATCAAGCGTTATATGATTTGCCCAATGATGCTGAAACGCCTGGACA
AATATACGTGGTTAGCCCCACAAGAAGGATGACCCGTGAAGTGTTGGAAGTAATCGCATGGCCTGGGGCCGCATGGGAAGTGACGCCAACAGGGAAGTATCAACTCTATC
CACACCAGCTAACCACAGAGGCGAGCGTGTGGCTTTCTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCACACCTCAAGAGGACAAAGGAAGCTCGTCGCAGGAAGGACGAGCCTTCAACGCGGAGGCCATCAAGCGTTATATGATTTGCCCAATGATGCTGAAACGCCTGGACA
AATATACGTGGTTAGCCCCACAAGAAGGATGACCCGTGAAGTGTTGGAAGTAATCGCATGGCCTGGGGCCGCATGGGAAGTGACGCCAACAGGGAAGTATCAACTCTATC
CACACCAGCTAACCACAGAGGCGAGCGTGTGGCTTTCTTCATAA
Protein sequenceShow/hide protein sequence
MHTSRGQRKLVAGRTSLQRGGHQALYDLPNDAETPGQIYVVSPTRRMTREVLEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLSS