; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023592 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023592
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr12:20234623..20234859
RNA-Seq ExpressionPI0023592
SyntenyPI0023592
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]5.1e-1053.33Show/hide
Query:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        M   QVNAA  S  +  Q+D++GC+  G  H  DACPLN E VA+V++D +SNTYNP WR
Subjt:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]3.0e-1046.67Show/hide
Query:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        M ++QVN    S+H    + +M CVGC G +NTD CP N + + + +ND +SNTYN GWR
Subjt:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]2.5e-1256.67Show/hide
Query:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        M + +VN A   +H   Q+ ++GCVGCGG HNTD CP N ETVA+V+ND + NTYN GWR
Subjt:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

TYJ99639.1 hypothetical protein E5676_scaffold562G00110 [Cucumis melo var. makuwa]6.2e-0856.82Show/hide
Query:  NQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        N+++++GCVGC   H  DAC LN ET+ +V+ND +SNTYN GWR
Subjt:  NQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]1.6e-0857.14Show/hide
Query:  QVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        QVNAAG  +H   Q+ ++GCVGC G HNT+ACP N E  A V+  + SNTYN GWR
Subjt:  QVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

TrEMBL top hitse value%identityAlignment
A0A5A7UG80 Uncharacterized protein3.0e-0856.82Show/hide
Query:  NQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        N+++++GCVGC   H  DAC LN ET+ +V+ND +SNTYN GWR
Subjt:  NQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

A0A5A7UTC1 Uncharacterized protein1.5e-1046.67Show/hide
Query:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        M ++QVN    S+H    + +M CVGC G +NTD CP N + + + +ND +SNTYN GWR
Subjt:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

A0A5A7VE68 Uncharacterized protein1.2e-1256.67Show/hide
Query:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        M + +VN A   +H   Q+ ++GCVGCGG HNTD CP N ETVA+V+ND + NTYN GWR
Subjt:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

A0A5D3CGY4 Uncharacterized protein8.0e-0957.14Show/hide
Query:  QVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        QVNAAG  +H   Q+ ++GCVGC G HNT+ACP N E  A V+  + SNTYN GWR
Subjt:  QVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

A0A5D3CSC7 Uncharacterized protein2.5e-1053.33Show/hide
Query:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR
        M   QVNAA  S  +  Q+D++GC+  G  H  DACPLN E VA+V++D +SNTYNP WR
Subjt:  MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATCGCAAGTCAACGCCGCAGGAGGCTCTATGCACACGGCTAACCAAATTGATGACATGGGATGCGTGGGATGCGGCGGTCATCATAACACTGACGCATGCCC
ACTCAATGCTGAAACTGTCGCGTTCGTAAGGAACGACTCCTTCTCCAATACTTACAACCCTGGTTGGAGGATGAAGAGATTGAATCTCTTACGCAGCGGAATAAATTCAC
AGAATCCTTTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATCGCAAGTCAACGCCGCAGGAGGCTCTATGCACACGGCTAACCAAATTGATGACATGGGATGCGTGGGATGCGGCGGTCATCATAACACTGACGCATGCCC
ACTCAATGCTGAAACTGTCGCGTTCGTAAGGAACGACTCCTTCTCCAATACTTACAACCCTGGTTGGAGGATGAAGAGATTGAATCTCTTACGCAGCGGAATAAATTCAC
AGAATCCTTTTCAATAA
Protein sequenceShow/hide protein sequence
MAISQVNAAGGSMHTANQIDDMGCVGCGGHHNTDACPLNAETVAFVRNDSFSNTYNPGWRMKRLNLLRSGINSQNPFQ