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PI0023624 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023624
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pro-like protein
Genome locationchr11:23022544..23022786
RNA-Seq ExpressionPI0023624
SyntenyPI0023624
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042502.1 putative RNA-directed DNA polymerase [Cucumis melo var. makuwa]2.8e-2782.5Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMNL
        M+EQDKD DKMRQEINNLG++VSKILELLS GKGKV+VDTTQSSNPIQD DDPIYP GFTP HM+V QSQT QHYV+ NL
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMNL

XP_031737553.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402446 [Cucumis sativus]1.1e-2679.75Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN
        MEEQDKD DKMRQ+INNLG++VSKILELLS GKGKV+V+T QSSNP+QD DDPIYP GFTP HM+  QSQT QHYVAMN
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN

XP_031738857.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402780 [Cucumis sativus]1.1e-2679.75Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN
        MEEQDKD DKMRQ+INNLG++VSKILELLS GKGKV+V+T QSSNP+QD DDPIYP GFTP HM+  QSQT QHYVAMN
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN

XP_031741309.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]1.1e-2679.75Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN
        MEEQDKD DKMRQ+INNLG++VSKILELLS GKGKV+V+T QSSNP+QD DDPIYP GFTP HM+  QSQT QHYVAMN
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN

XP_031742360.1 uncharacterized protein LOC116404324 [Cucumis sativus]1.1e-2679.75Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN
        MEEQDKD DKMRQ+INNLG++VSKILELLS GKGKV+V+T QSSNP+QD DDPIYP GFTP HM+  QSQT QHYVAMN
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN

TrEMBL top hitse value%identityAlignment
A0A5A7T9N7 Gag-pro-like protein3.3e-2681.01Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN
        MEE+DKD DKMRQEINNLG++VSKILELLS GKGKV+VDT QSSNPIQD DDPI+P GFTP HM+V QSQTIQHYV  N
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN

A0A5A7TGG5 Putative RNA-directed DNA polymerase1.3e-2782.5Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMNL
        M+EQDKD DKMRQEINNLG++VSKILELLS GKGKV+VDTTQSSNPIQD DDPIYP GFTP HM+V QSQT QHYV+ NL
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMNL

A0A5A7U5D0 Gag-pro-like protein1.5e-2680Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMNL
        MEEQDKD DKMRQEINNL ++VSKIL+LLS GKGKV+VD TQSSNP+QD DDPIYPLGFTP HM+V QSQT QHYVA +L
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMNL

A0A5A7USL0 Gag-pro-like protein6.6e-2782.28Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN
        MEEQDKD DKMRQEINNLG++VSKILELLS GKGKV+VDTTQSSNP+QD DDPIY  GFTP HM+V QSQT QHYVA N
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN

A0A5D3DLA4 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein3.3e-2681.01Show/hide
Query:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN
        MEEQDK+ DKMRQEINNLG++VSKILELLS GKGKV+VDTTQSSNPIQD DD +YPLGFT  HM+V QSQT QHYVA N
Subjt:  MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACAAGACAAAGACAAGGATAAAATGAGACAAGAGATTAATAACCTTGGGGATGAAGTTTCAAAAATACTAGAATTGCTTTCAACGGGAAAAGGGAAAGTCAT
TGTAGATACCACACAATCAAGCAATCCAATTCAGGACAATGATGATCCCATTTATCCTCTAGGATTTACGCCATCCCACATGCATGTTTTGCAGTCTCAAACCATTCAAC
ACTATGTTGCTATGAACCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACAAGACAAAGACAAGGATAAAATGAGACAAGAGATTAATAACCTTGGGGATGAAGTTTCAAAAATACTAGAATTGCTTTCAACGGGAAAAGGGAAAGTCAT
TGTAGATACCACACAATCAAGCAATCCAATTCAGGACAATGATGATCCCATTTATCCTCTAGGATTTACGCCATCCCACATGCATGTTTTGCAGTCTCAAACCATTCAAC
ACTATGTTGCTATGAACCTCTAG
Protein sequenceShow/hide protein sequence
MEEQDKDKDKMRQEINNLGDEVSKILELLSTGKGKVIVDTTQSSNPIQDNDDPIYPLGFTPSHMHVLQSQTIQHYVAMNL