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PI0023693 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023693
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZf-CCHC domain-containing protein
Genome locationchr04:21503639..21503905
RNA-Seq ExpressionPI0023693
SyntenyPI0023693
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0019538 - protein metabolic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0140096 - catalytic activity, acting on a protein (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031954.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.5e-1860.23Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MAGRR  NPA   DREQEEA++I  L P+TSTVRLL V+ SLGDLH+KF+R+L+N E LN R++  LAP RIEA  +  RN  +R GR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

KAA0056581.1 reverse transcriptase [Cucumis melo var. makuwa]4.1e-2469.32Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MAG+R   PA   +REQ+EA+EIT+LSPRTSTV LLAVE+SLGDLHDKFD+M+D+LETLN R++  LAPARIEAN +  RN GN+GGR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

KAA0063032.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]2.6e-1865.91Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MA RR  NP  R +REQEE +EI  LSPRTSTVRLLAVE+SLGDLH K +RM+D LE L  R+++  APARIEA A   RN GNRGGR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

TYK11204.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-1865.91Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MAGRR   PAT  +REQEE +E   LSPRTSTV  LAVE+SLGDLH+KFDR++D LETL  R++   A ARIEANA   RN GNRGGR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

TYK16316.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]7.5e-1864.77Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MA RR  NP  R +REQEE +EI  LSPRTSTVRLLAVE+SLGDLH K +RM+D LE L  R+++  APARI+A A   RN GNRGGR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

TrEMBL top hitse value%identityAlignment
A0A5A7SLA2 Zf-CCHC domain-containing protein7.3e-1960.23Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MAGRR  NPA   DREQEEA++I  L P+TSTVRLL V+ SLGDLH+KF+R+L+N E LN R++  LAP RIEA  +  RN  +R GR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

A0A5A7V462 Zf-CCHC domain-containing protein1.2e-1865.91Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MA RR  NP  R +REQEE +EI  LSPRTSTVRLLAVE+SLGDLH K +RM+D LE L  R+++  APARIEA A   RN GNRGGR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

A0A5D3CJ99 Reverse transcriptase5.6e-1965.91Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MAGRR   PAT  +REQEE +E   LSPRTSTV  LAVE+SLGDLH+KFDR++D LETL  R++   A ARIEANA   RN GNRGGR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

A0A5D3D0X3 Zf-CCHC domain-containing protein3.6e-1864.77Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MA RR  NP  R +REQEE +EI  LSPRTSTVRLLAVE+SLGDLH K +RM+D LE L  R+++  APARI+A A   RN GNRGGR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

A0A5D3DKV9 Reverse transcriptase2.0e-2469.32Show/hide
Query:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR
        MAG+R   PA   +REQ+EA+EIT+LSPRTSTV LLAVE+SLGDLHDKFD+M+D+LETLN R++  LAPARIEAN +  RN GN+GGR
Subjt:  MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGCCGGAGAGCAGTAAACCCAGCCACGAGGGTTGACCGTGAGCAAGAAGAAGCGAAGGAAATCACCATTCTTTCACCAAGGACATCGACGGTTCGCTTGCTGGC
CGTTGAGAATTCTTTGGGAGATTTGCACGACAAGTTCGATAGAATGTTAGACAATCTTGAAACACTGAACTGGAGAATAGAGCAACCACTGGCACCGGCACGAATTGAAG
CAAATGCGATTGGCAAACGAAATTTTGGTAACAGGGGAGGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGCCGGAGAGCAGTAAACCCAGCCACGAGGGTTGACCGTGAGCAAGAAGAAGCGAAGGAAATCACCATTCTTTCACCAAGGACATCGACGGTTCGCTTGCTGGC
CGTTGAGAATTCTTTGGGAGATTTGCACGACAAGTTCGATAGAATGTTAGACAATCTTGAAACACTGAACTGGAGAATAGAGCAACCACTGGCACCGGCACGAATTGAAG
CAAATGCGATTGGCAAACGAAATTTTGGTAACAGGGGAGGCCGGTGA
Protein sequenceShow/hide protein sequence
MAGRRAVNPATRVDREQEEAKEITILSPRTSTVRLLAVENSLGDLHDKFDRMLDNLETLNWRIEQPLAPARIEANAIGKRNFGNRGGR