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PI0023694 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023694
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:14980245..14981433
RNA-Seq ExpressionPI0023694
SyntenyPI0023694
Gene Ontology termsNA
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-7065.07Show/hide
Query:  IAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQ----------GLVRQGCTFSRARKRFIA----
        +AG LILLQIWAWERFST+APQL HAN+HLLPGRA GS W                  YMFDLLQRDQ          G +   C   +   R I+    
Subjt:  IAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQ----------GLVRQGCTFSRARKRFIA----

Query:  --TGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVY
           G SIQQFD +VTQEYIHWYNNITRLYITRP AAVGHLR NN RLRDVADDPQQ L+ICNNN+RYMEEIH MY + IVP PV+RGRVRV++ ELDEVY
Subjt:  --TGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVY

Query:  HNEEEVPPVTQTQSQIGYGNPMMMMPAFG
        HN EEVPP TQTQSQ GYG+PM MMP FG
Subjt:  HNEEEVPPVTQTQSQIGYGNPMMMMPAFG

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.7e-7267.73Show/hide
Query:  IAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS----------WYMFDLLQRDQ----------GLVRQGCTFSRARKRFIA------TGASIQQ
        +AG LILLQIWAWERFST+APQL HAN+HLLPGRA GS           YMFDLLQRDQ          G +   C   +   R I+       G SIQQ
Subjt:  IAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS----------WYMFDLLQRDQ----------GLVRQGCTFSRARKRFIA------TGASIQQ

Query:  FDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPV
        FD +VTQEYIHWYNNITRLYITRPGAAVGHLR NN RLRDVADDPQQ L+ICNNN+RYMEEIH MY + IVP PV+RGRVRV++ ELDEVYHN EEVPP 
Subjt:  FDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPV

Query:  TQTQSQIGYGNPMMMMPAFG
        TQTQSQ GYG+PM MMP FG
Subjt:  TQTQSQIGYGNPMMMMPAFG

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.6e-6453.38Show/hide
Query:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVRQG----
        GGACL WLYRQ+CK +K+ VREIAGPLILLQIWAWERF  +APQL H N + L GRA+GS W                  YMFDLLQ  Q  ++Q     
Subjt:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVRQG----

Query:  CTFS------------------------RARKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNER
        C                             R+RF ATG  I+QFD +VTQEYIHWY NI++LYIT+PGAA+ HLR NN RLR+VADD QQ L+ICN+NE+
Subjt:  CTFS------------------------RARKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNER

Query:  YMEEIHYMYVVPIVPLPVNRGRVRVKKP-ELDEVYHNEEEVPPVTQTQSQI--GYGNPMMMMPAFG
        YME IHYMY VPIV  PV + R  V++P +L+EV  + EEVPP+TQTQ+Q    Y  P+MMMP FG
Subjt:  YMEEIHYMYVVPIVPLPVNRGRVRVKKP-ELDEVYHNEEEVPPVTQTQSQI--GYGNPMMMMPAFG

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.5e-8059.27Show/hide
Query:  GACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVR-------
        G CL WLYRQ+CK +KRDV +IAG LILLQIWAWERFST+APQL H NDHLL GRA GS W                  YMFDLLQRDQ +         
Subjt:  GACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVR-------

Query:  -------------------------------QGCTFS---RARKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDP
                                       +GCTFS   R+R+RF+    SIQQFD +VTQEYIH YNNITRLYITRPGA VGHLR NN RLRDV +DP
Subjt:  -------------------------------QGCTFS---RARKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDP

Query:  QQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPVTQTQSQIGYGNPMMMMPAFG
        QQ LDICNNNERYME+IH +Y +PIVP PV+R R RV++ ELDEVYHN EEVPP TQTQSQ GYG+PM MMP FG
Subjt:  QQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPVTQTQSQIGYGNPMMMMPAFG

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.5e-6449.83Show/hide
Query:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVRQGC---
        GGACL WLYRQ+CK +K+ VREIAG LILLQIWAWERF  +APQL H N + L GRA+GS W                  YMFDLLQ  Q +    C   
Subjt:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVRQGC---

Query:  -----------TFSRA----------------------------------RKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRR
                    F +A                                  R+RF ATG  I+QFD +VTQEYIHWY NI++LYIT+PGAA+ HLR NN R
Subjt:  -----------TFSRA----------------------------------RKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRR

Query:  LRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKK-PELDEVYHNEEEVPPVTQTQSQI--GYGNPMMMMPAFGV
        LR++ADDPQQ L+ICN+NE+YME IHYMY VPIVP PV R R  V++  +L+EV  + EEVPP+TQTQ+Q    Y +P+MMMP FG+
Subjt:  LRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKK-PELDEVYHNEEEVPPVTQTQSQI--GYGNPMMMMPAFGV

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-7065.07Show/hide
Query:  IAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQ----------GLVRQGCTFSRARKRFIA----
        +AG LILLQIWAWERFST+APQL HAN+HLLPGRA GS W                  YMFDLLQRDQ          G +   C   +   R I+    
Subjt:  IAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQ----------GLVRQGCTFSRARKRFIA----

Query:  --TGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVY
           G SIQQFD +VTQEYIHWYNNITRLYITRP AAVGHLR NN RLRDVADDPQQ L+ICNNN+RYMEEIH MY + IVP PV+RGRVRV++ ELDEVY
Subjt:  --TGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVY

Query:  HNEEEVPPVTQTQSQIGYGNPMMMMPAFG
        HN EEVPP TQTQSQ GYG+PM MMP FG
Subjt:  HNEEEVPPVTQTQSQIGYGNPMMMMPAFG

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.7e-7267.73Show/hide
Query:  IAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS----------WYMFDLLQRDQ----------GLVRQGCTFSRARKRFIA------TGASIQQ
        +AG LILLQIWAWERFST+APQL HAN+HLLPGRA GS           YMFDLLQRDQ          G +   C   +   R I+       G SIQQ
Subjt:  IAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS----------WYMFDLLQRDQ----------GLVRQGCTFSRARKRFIA------TGASIQQ

Query:  FDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPV
        FD +VTQEYIHWYNNITRLYITRPGAAVGHLR NN RLRDVADDPQQ L+ICNNN+RYMEEIH MY + IVP PV+RGRVRV++ ELDEVYHN EEVPP 
Subjt:  FDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPV

Query:  TQTQSQIGYGNPMMMMPAFG
        TQTQSQ GYG+PM MMP FG
Subjt:  TQTQSQIGYGNPMMMMPAFG

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.5e-6553.38Show/hide
Query:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVRQG----
        GGACL WLYRQ+CK +K+ VREIAGPLILLQIWAWERF  +APQL H N + L GRA+GS W                  YMFDLLQ  Q  ++Q     
Subjt:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVRQG----

Query:  CTFS------------------------RARKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNER
        C                             R+RF ATG  I+QFD +VTQEYIHWY NI++LYIT+PGAA+ HLR NN RLR+VADD QQ L+ICN+NE+
Subjt:  CTFS------------------------RARKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNER

Query:  YMEEIHYMYVVPIVPLPVNRGRVRVKKP-ELDEVYHNEEEVPPVTQTQSQI--GYGNPMMMMPAFG
        YME IHYMY VPIV  PV + R  V++P +L+EV  + EEVPP+TQTQ+Q    Y  P+MMMP FG
Subjt:  YMEEIHYMYVVPIVPLPVNRGRVRVKKP-ELDEVYHNEEEVPPVTQTQSQI--GYGNPMMMMPAFG

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.2e-8059.27Show/hide
Query:  GACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVR-------
        G CL WLYRQ+CK +KRDV +IAG LILLQIWAWERFST+APQL H NDHLL GRA GS W                  YMFDLLQRDQ +         
Subjt:  GACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVR-------

Query:  -------------------------------QGCTFS---RARKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDP
                                       +GCTFS   R+R+RF+    SIQQFD +VTQEYIH YNNITRLYITRPGA VGHLR NN RLRDV +DP
Subjt:  -------------------------------QGCTFS---RARKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRRLRDVADDP

Query:  QQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPVTQTQSQIGYGNPMMMMPAFG
        QQ LDICNNNERYME+IH +Y +PIVP PV+R R RV++ ELDEVYHN EEVPP TQTQSQ GYG+PM MMP FG
Subjt:  QQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPVTQTQSQIGYGNPMMMMPAFG

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-6449.83Show/hide
Query:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVRQGC---
        GGACL WLYRQ+CK +K+ VREIAG LILLQIWAWERF  +APQL H N + L GRA+GS W                  YMFDLLQ  Q +    C   
Subjt:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGS-W------------------YMFDLLQRDQGLVRQGC---

Query:  -----------TFSRA----------------------------------RKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRR
                    F +A                                  R+RF ATG  I+QFD +VTQEYIHWY NI++LYIT+PGAA+ HLR NN R
Subjt:  -----------TFSRA----------------------------------RKRFIATGASIQQFDQNVTQEYIHWYNNITRLYITRPGAAVGHLRLNNRR

Query:  LRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKK-PELDEVYHNEEEVPPVTQTQSQI--GYGNPMMMMPAFGV
        LR++ADDPQQ L+ICN+NE+YME IHYMY VPIVP PV R R  V++  +L+EV  + EEVPP+TQTQ+Q    Y +P+MMMP FG+
Subjt:  LRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKK-PELDEVYHNEEEVPPVTQTQSQI--GYGNPMMMMPAFGV

SwissProt top hitse value%identityAlignment
Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog1.8e-0753.49Show/hide
Query:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAP
        G A L  LYR++C+ +KR V  I GPL+LLQ+WAWER     P
Subjt:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAP

Arabidopsis top hitse value%identityAlignment
AT1G48120.1 hydrolases;protein serine/threonine phosphatases1.3e-0853.49Show/hide
Query:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAP
        G A L  LYR++C+ +KR V  I GPL+LLQ+WAWER     P
Subjt:  GGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAGCGTGTTTGACATGGTTGTACAGACAAATATGCAAAGGAGCAAAACGAGATGTTCGTGAAATTGCTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGA
ACGATTTTCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCATGGTACATGTTTGATCTTCTTCAGCGTGATCAGGGAT
TGGTCAGACAAGGTTGCACATTTAGTCGTGCTCGTAAAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGAATGTGACTCAAGAATACATTCACTGGTAT
AATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATTGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGCCCTTGA
TATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGTTGTACCTATTGTACCTCTACCAGTTAACAGGGGACGTGTTCGAGTGAAAAAACCTGAAC
TTGATGAAGTTTACCATAACGAAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAATTGGTTATGGTAACCCGATGATGATGATGCCAGCTTTTGGAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAGCGTGTTTGACATGGTTGTACAGACAAATATGCAAAGGAGCAAAACGAGATGTTCGTGAAATTGCTGGTCCGTTGATACTGCTTCAAATATGGGCTTGGGA
ACGATTTTCCACAATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCATGGTACATGTTTGATCTTCTTCAGCGTGATCAGGGAT
TGGTCAGACAAGGTTGCACATTTAGTCGTGCTCGTAAAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGAATGTGACTCAAGAATACATTCACTGGTAT
AATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATTGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCGCAACAAGCCCTTGA
TATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGTTGTACCTATTGTACCTCTACCAGTTAACAGGGGACGTGTTCGAGTGAAAAAACCTGAAC
TTGATGAAGTTTACCATAACGAAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAATTGGTTATGGTAACCCGATGATGATGATGCCAGCTTTTGGAGTATGA
Protein sequenceShow/hide protein sequence
MGGACLTWLYRQICKGAKRDVREIAGPLILLQIWAWERFSTMAPQLRHANDHLLPGRAHGSWYMFDLLQRDQGLVRQGCTFSRARKRFIATGASIQQFDQNVTQEYIHWY
NNITRLYITRPGAAVGHLRLNNRRLRDVADDPQQALDICNNNERYMEEIHYMYVVPIVPLPVNRGRVRVKKPELDEVYHNEEEVPPVTQTQSQIGYGNPMMMMPAFGV