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PI0023724 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023724
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr06:20082422..20083452
RNA-Seq ExpressionPI0023724
SyntenyPI0023724
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025491.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.8e-0678.38Show/hide
Query:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLG
        MQ++I KSSED  EPTPEAIICE +LG RLGHTKGLG
Subjt:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLG
KAA0055007.1 uncharacterized protein E6C27_scaffold43052G001590 [Cucumis melo var. makuwa]6.5e-1471.67Show/hide
Query:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLGWNATSNVATCGTSSYVFEKDIGD
        MQ++IRKSSED  +PTP+ II E++L KR GHTKGLGW AT NVATC TS++VFEKDIGD
Subjt:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLGWNATSNVATCGTSSYVFEKDIGD
TYK00374.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.8e-0678.38Show/hide
Query:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLG
        MQ++I KSSED  EPTPEAIICE +LG RLGHTKGLG
Subjt:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLG
TrEMBL top hitse value%identityAlignment
A0A5A7SMM8 CACTA en-spm transposon protein1.9e-0678.38Show/hide
Query:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLG
        MQ++I KSSED  EPTPEAIICE +LG RLGHTKGLG
Subjt:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLG
A0A5A7UKB8 DUF4218 domain-containing protein3.2e-1471.67Show/hide
Query:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLGWNATSNVATCGTSSYVFEKDIGD
        MQ++IRKSSED  +PTP+ II E++L KR GHTKGLGW AT NVATC TS++VFEKDIGD
Subjt:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLGWNATSNVATCGTSSYVFEKDIGD
A0A5D3BM75 CACTA en-spm transposon protein1.9e-0678.38Show/hide
Query:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLG
        MQ++I KSSED  EPTPEAIICE +LG RLGHTKGLG
Subjt:  MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAGAAGATAAGAAAATCATCAGAAGATGAACTTGAACCAACACCAGAGGCAATTATTTGTGAACGGATTTTGGGAAAACGATTAGGTCATACTAAAGGTCTTGG
ATGGAACGCAACCTCCAATGTAGCAACATGTGGTACATCTTCTTATGTGTTTGAGAAAGATATTGGGGATACTATCGCAACGAGCGCTAAAAGTGCATCGGAGAGGAGCG
ACGACGAGGATGAATTCAGCGATGGCGATGTGAGTGGTGGTTGTGGTGCGATCGTGACTGGGAAGAAGAGAGGTGAAACAACCGAGAGAGATGATGAGACTATACCTCAA
CATTTGGCGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAGAAGATAAGAAAATCATCAGAAGATGAACTTGAACCAACACCAGAGGCAATTATTTGTGAACGGATTTTGGGAAAACGATTAGGTCATACTAAAGGTCTTGG
ATGGAACGCAACCTCCAATGTAGCAACATGTGGTACATCTTCTTATGTGTTTGAGAAAGATATTGGGGATACTATCGCAACGAGCGCTAAAAGTGCATCGGAGAGGAGCG
ACGACGAGGATGAATTCAGCGATGGCGATGTGAGTGGTGGTTGTGGTGCGATCGTGACTGGGAAGAAGAGAGGTGAAACAACCGAGAGAGATGATGAGACTATACCTCAA
CATTTGGCGGCTTAA
Protein sequenceShow/hide protein sequence
MQKKIRKSSEDELEPTPEAIICERILGKRLGHTKGLGWNATSNVATCGTSSYVFEKDIGDTIATSAKSASERSDDEDEFSDGDVSGGCGAIVTGKKRGETTERDDETIPQ
HLAA