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PI0023771 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023771
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr07:19151948..19152406
RNA-Seq ExpressionPI0023771
SyntenyPI0023771
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038999.1 envelope-like protein [Cucumis melo var. makuwa]2.6e-2647.18Show/hide
Query:  GQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSA
        G FI+NQLL+HV SFGVKI I+ PR  S +L+  +  +LT  +APGP  KTL+LSYRLFQG HV  I H+  P +        N N S +G  +   L++
Subjt:  GQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSA

Query:  RIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS
        RI+  LT ES +L+ +I+ LS R+++VDAL++HL++  PS S
Subjt:  RIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS

KAA0046929.1 envelope-like protein [Cucumis melo var. makuwa]4.0e-2748.57Show/hide
Query:  FIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARI
        FI+NQLL+HV +FGVKI I  PR  SS+L+  ++DILT  DAPGP PKTL+LSY LFQGS+V  I+H+ +P ++     I++++ +  G  +   L++RI
Subjt:  FIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARI

Query:  IKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS
        I  LT E  +L+  I+ L  R+++VD L+QHL+ L+PSSS
Subjt:  IKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS

KAA0063935.1 uncharacterized protein E6C27_scaffold616G00780 [Cucumis melo var. makuwa]5.8e-2646.76Show/hide
Query:  FIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARI
        FI+N+LL+HV +FGVKI I  P    S+L+  + DILT  DAPG  PKT +LSYRLFQGSHV  ++H+ +P ++     I++IN S  G  +P  L++RI
Subjt:  FIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARI

Query:  IKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSS
        I  L+ ES + +  I+ +S R+++VD+L++HL+ L+PSS
Subjt:  IKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSS

TYK25712.1 uncharacterized protein E5676_scaffold2736G00070 [Cucumis melo var. makuwa]9.0e-2748.95Show/hide
Query:  MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALS
        MG FI+NQLL+HV SFG+K+ I+F RL SS+L+  +  +LT  DAPGP PKT+ LSYRLFQGSHV  I H   P +        + + S  G  +   L+
Subjt:  MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALS

Query:  ARIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS
         RII  LT ES +L   I  LS R+++VDAL++HL++L PS+S
Subjt:  ARIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS

XP_008465605.1 PREDICTED: uncharacterized protein LOC103503245 [Cucumis melo]9.0e-2748.95Show/hide
Query:  MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALS
        MG FI+NQLL+HV SFG+K+ I+F RL SS+L+  +  +LT  DAPGP PKT+ LSYRLFQGSHV  I H   P +        + + S  G  +   L+
Subjt:  MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALS

Query:  ARIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS
         RII  LT ES +L   I  LS R+++VDAL++HL++L PS+S
Subjt:  ARIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS

TrEMBL top hitse value%identityAlignment
A0A1S3CPM5 uncharacterized protein LOC1035032454.3e-2748.95Show/hide
Query:  MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALS
        MG FI+NQLL+HV SFG+K+ I+F RL SS+L+  +  +LT  DAPGP PKT+ LSYRLFQGSHV  I H   P +        + + S  G  +   L+
Subjt:  MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALS

Query:  ARIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS
         RII  LT ES +L   I  LS R+++VDAL++HL++L PS+S
Subjt:  ARIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS

A0A5A7TCJ0 Envelope-like protein1.3e-2647.18Show/hide
Query:  GQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSA
        G FI+NQLL+HV SFGVKI I+ PR  S +L+  +  +LT  +APGP  KTL+LSYRLFQG HV  I H+  P +        N N S +G  +   L++
Subjt:  GQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSA

Query:  RIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS
        RI+  LT ES +L+ +I+ LS R+++VDAL++HL++  PS S
Subjt:  RIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS

A0A5A7U0B3 Envelope-like protein1.9e-2748.57Show/hide
Query:  FIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARI
        FI+NQLL+HV +FGVKI I  PR  SS+L+  ++DILT  DAPGP PKTL+LSY LFQGS+V  I+H+ +P ++     I++++ +  G  +   L++RI
Subjt:  FIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARI

Query:  IKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS
        I  LT E  +L+  I+ L  R+++VD L+QHL+ L+PSSS
Subjt:  IKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS

A0A5A7VDH4 Uncharacterized protein2.8e-2646.76Show/hide
Query:  FIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARI
        FI+N+LL+HV +FGVKI I  P    S+L+  + DILT  DAPG  PKT +LSYRLFQGSHV  ++H+ +P ++     I++IN S  G  +P  L++RI
Subjt:  FIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARI

Query:  IKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSS
        I  L+ ES + +  I+ +S R+++VD+L++HL+ L+PSS
Subjt:  IKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSS

A0A5D3DQA5 Uncharacterized protein4.3e-2748.95Show/hide
Query:  MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALS
        MG FI+NQLL+HV SFG+K+ I+F RL SS+L+  +  +LT  DAPGP PKT+ LSYRLFQGSHV  I H   P +        + + S  G  +   L+
Subjt:  MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALS

Query:  ARIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS
         RII  LT ES +L   I  LS R+++VDAL++HL++L PS+S
Subjt:  ARIIKVLTEESISLNYIIHYLSARKIKVDALLQHLRALVPSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAATTCATTTTTAATCAGCTTCTTAAGCATGTAGATTCCTTTGGCGTAAAGATTTTCATATCCTTTCCAAGATTGCTATCTAGTATTCTTATTCAACAACATTC
AGATATTTTAACAAAACAAGATGCTCCTGGACCTCACCCTAAAACCTTGACCTTAAGCTACAGACTATTCCAAGGATCTCATGTTTTTTATATTCAACATAATTTCCAAC
CCCATAAAGATTCTGCTTCTACCAGTATTGAAAATATCAACATTTCTCCAAATGGCCTTCTTATTCCTTCTGCTCTTTCAGCAAGAATTATCAAAGTATTGACTGAAGAA
TCCATATCTCTCAATTATATAATTCATTATCTTTCTGCTCGAAAAATAAAAGTAGATGCATTATTACAACATTTAAGAGCTCTAGTACCATCTTCTTCAAACACAACAGT
TTCTGCTAATCACGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCAATTCATTTTTAATCAGCTTCTTAAGCATGTAGATTCCTTTGGCGTAAAGATTTTCATATCCTTTCCAAGATTGCTATCTAGTATTCTTATTCAACAACATTC
AGATATTTTAACAAAACAAGATGCTCCTGGACCTCACCCTAAAACCTTGACCTTAAGCTACAGACTATTCCAAGGATCTCATGTTTTTTATATTCAACATAATTTCCAAC
CCCATAAAGATTCTGCTTCTACCAGTATTGAAAATATCAACATTTCTCCAAATGGCCTTCTTATTCCTTCTGCTCTTTCAGCAAGAATTATCAAAGTATTGACTGAAGAA
TCCATATCTCTCAATTATATAATTCATTATCTTTCTGCTCGAAAAATAAAAGTAGATGCATTATTACAACATTTAAGAGCTCTAGTACCATCTTCTTCAAACACAACAGT
TTCTGCTAATCACGAATGA
Protein sequenceShow/hide protein sequence
MGQFIFNQLLKHVDSFGVKIFISFPRLLSSILIQQHSDILTKQDAPGPHPKTLTLSYRLFQGSHVFYIQHNFQPHKDSASTSIENINISPNGLLIPSALSARIIKVLTEE
SISLNYIIHYLSARKIKVDALLQHLRALVPSSSNTTVSANHE