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PI0023783 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023783
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:25367854..25368063
RNA-Seq ExpressionPI0023783
SyntenyPI0023783
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.1e-1570.15Show/hide
Query:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLS
        MDTD A  NI NIC MKHLQ  QI KSTNKNQR KR++ N+E RVD +NQLEI+DV +VEHI+FLLS
Subjt:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLS

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.0e-1468.75Show/hide
Query:  AAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLSFK
        A  NITNIC MKHLQ  QI KSTNKNQR KR++ N+EFRV+ DNQL+I++V +VEHI+FLLS K
Subjt:  AAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLSFK

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.3e-1273.21Show/hide
Query:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDV
        MD D A  NITNIC MKHLQ  QI KSTNKNQR KR++ N+EFRVD DNQLEI+DV
Subjt:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDV

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein1.9e-1468.75Show/hide
Query:  AAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLSFK
        A  NITNIC MKHLQ  QI KSTNKNQR KR++ N+EFRV+ DNQL+I++V +VEHI+FLLS K
Subjt:  AAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLSFK

A0A5A7TI03 Stress-response A/B barrel domain-containing protein5.2e-0473.53Show/hide
Query:  QIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDV
        QI KSTNKNQR KR+Q N+EF+VD DNQLEI+D+
Subjt:  QIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDV

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.1e-1273.21Show/hide
Query:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDV
        MD D A  NITNIC MKHLQ  QI KSTNKNQR KR++ N+EFRVD DNQLEI+DV
Subjt:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-1570.15Show/hide
Query:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLS
        MDTD A  NI NIC MKHLQ  QI KSTNKNQR KR++ N+E RVD +NQLEI+DV +VEHI+FLLS
Subjt:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLS

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X26.8e-0463.41Show/hide
Query:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNL
        MD D    NITNIC MKHLQ  QI KSTNKNQR KR++ ++
Subjt:  MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAG
TCAAGGCAACCTAGAGTTCAGAGTCGACGACGACAACCAGCTTGAAATCGAAGACGTCTGGATTGTGGAACACATTAATTTTCTTTTATCTTTTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAG
TCAAGGCAACCTAGAGTTCAGAGTCGACGACGACAACCAGCTTGAAATCGAAGACGTCTGGATTGTGGAACACATTAATTTTCTTTTATCTTTTAAATAA
Protein sequenceShow/hide protein sequence
MDTDAAAENITNICTMKHLQTSQIHKSTNKNQRIKRSQGNLEFRVDDDNQLEIEDVWIVEHINFLLSFK