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PI0023836 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023836
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr08:13483645..13484920
RNA-Seq ExpressionPI0023836
SyntenyPI0023836
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038959.1 MuDRA-like transposase [Cucumis melo var. makuwa]7.1e-2637.81Show/hide
Query:  VRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQ-----GQNIDPYT-
        VR SP ESY LL  YGEAL+++NPGT + +E E +  FKY++MA G  IR FLN IRLVI +D    K K+ G + V++ +D N Q      + +D  T 
Subjt:  VRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQ-----GQNIDPYT-

Query:  -------------------LCSTAYTVTSWLASYVEPIFSVCYASEWKTTEGFVARVILPAQIVGQVGCCQMERIPLNSKIEKKIHRCSRCKAVGHNRKT
                           L       T +  +YVE ++ V   S WKT+E ++   +LP ++V +VG  + +RIP   +   K+H+C +CK +GHNR T
Subjt:  -------------------LCSTAYTVTSWLASYVEPIFSVCYASEWKTTEGFVARVILPAQIVGQVGCCQMERIPLNSKIEKKIHRCSRCKAVGHNRKT

Query:  C
        C
Subjt:  C

KAA0065619.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.9e-1875.36Show/hide
Query:  SPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFK
        SPRESY LLA YGE  +IS   +QYDLE EP+ HFKYVYMA GASIR FLNYIRLVI VDVAH KGK+K
Subjt:  SPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFK

TYK07187.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.2e-2076.71Show/hide
Query:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFK
        MVR SPRESY LLA YGE  +IS   +QYDLETEP+ HFKYVYMA GASIR FLNYIRLVI VDVAH KGK+K
Subjt:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFK

XP_022145820.1 uncharacterized protein LOC111015181 [Momordica charantia]6.0e-1750Show/hide
Query:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQGQNIDPYTLCST-
        ++R  P  SY LL  YGEAL+I NPGT ++LE E   +FKYV+M  G SIR FL  IR V+ VD AH KGKF+G++L A  +DAN Q   I P       
Subjt:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQGQNIDPYTLCST-

Query:  AYTVTSWL
          TV SW+
Subjt:  AYTVTSWL

XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]4.6e-1752.87Show/hide
Query:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQ
        +VR  P++SY  L  YGEA++I NPGT + LETE +++FKY++MA GASIR F +  R VI VD  H KGKFKG++L+ +++D N Q
Subjt:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQ

TrEMBL top hitse value%identityAlignment
A0A5A7TCE7 MuDRA-like transposase3.4e-2637.81Show/hide
Query:  VRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQ-----GQNIDPYT-
        VR SP ESY LL  YGEAL+++NPGT + +E E +  FKY++MA G  IR FLN IRLVI +D    K K+ G + V++ +D N Q      + +D  T 
Subjt:  VRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQ-----GQNIDPYT-

Query:  -------------------LCSTAYTVTSWLASYVEPIFSVCYASEWKTTEGFVARVILPAQIVGQVGCCQMERIPLNSKIEKKIHRCSRCKAVGHNRKT
                           L       T +  +YVE ++ V   S WKT+E ++   +LP ++V +VG  + +RIP   +   K+H+C +CK +GHNR T
Subjt:  -------------------LCSTAYTVTSWLASYVEPIFSVCYASEWKTTEGFVARVILPAQIVGQVGCCQMERIPLNSKIEKKIHRCSRCKAVGHNRKT

Query:  C
        C
Subjt:  C

A0A5A7VJH9 MuDRA-like transposase9.0e-1975.36Show/hide
Query:  SPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFK
        SPRESY LLA YGE  +IS   +QYDLE EP+ HFKYVYMA GASIR FLNYIRLVI VDVAH KGK+K
Subjt:  SPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFK

A0A5D3C5S2 MuDRA-like transposase5.7e-2176.71Show/hide
Query:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFK
        MVR SPRESY LLA YGE  +IS   +QYDLETEP+ HFKYVYMA GASIR FLNYIRLVI VDVAH KGK+K
Subjt:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFK

A0A6J1CVL4 uncharacterized protein LOC1110151812.9e-1750Show/hide
Query:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQGQNIDPYTLCST-
        ++R  P  SY LL  YGEAL+I NPGT ++LE E   +FKYV+M  G SIR FL  IR V+ VD AH KGKF+G++L A  +DAN Q   I P       
Subjt:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQGQNIDPYTLCST-

Query:  AYTVTSWL
          TV SW+
Subjt:  AYTVTSWL

A0A6J1DL08 uncharacterized protein LOC1110220712.2e-1752.87Show/hide
Query:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQ
        +VR  P++SY  L  YGEA++I NPGT + LETE +++FKY++MA GASIR F +  R VI VD  H KGKFKG++L+ +++D N Q
Subjt:  MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGAAGTTCCCCTAGAGAATCGTACACTTTGTTAGCTTGGTATGGAGAAGCGTTGGAGATTTCTAACCCGGGTACTCAATACGATTTAGAGACAGAACCTAATGT
GCATTTCAAGTATGTTTATATGGCATTTGGGGCATCCATTAGATGTTTTTTAAACTACATTAGGTTGGTCATTGCGGTTGACGTTGCACATTACAAGGGAAAGTTTAAGG
GTATCATGCTCGTAGCGATGTCGATTGACGCTAATAAGCAAGGTCAGAACATCGATCCATACACATTATGCTCCACTGCTTACACCGTCACATCTTGGTTGGCCAGTTAC
GTCGAACCTATCTTCTCGGTTTGCTATGCTTCTGAATGGAAGACTACAGAAGGATTTGTCGCTAGAGTCATCCTACCAGCGCAAATAGTTGGCCAAGTTGGTTGTTGTCA
AATGGAGCGTATCCCATTGAACAGTAAAATAGAGAAAAAGATTCATCGGTGTTCTCGTTGCAAGGCTGTAGGGCACAATCGAAAGACATGTAAAGCTAGATTTATTGATA
ATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGAAGTTCCCCTAGAGAATCGTACACTTTGTTAGCTTGGTATGGAGAAGCGTTGGAGATTTCTAACCCGGGTACTCAATACGATTTAGAGACAGAACCTAATGT
GCATTTCAAGTATGTTTATATGGCATTTGGGGCATCCATTAGATGTTTTTTAAACTACATTAGGTTGGTCATTGCGGTTGACGTTGCACATTACAAGGGAAAGTTTAAGG
GTATCATGCTCGTAGCGATGTCGATTGACGCTAATAAGCAAGGTCAGAACATCGATCCATACACATTATGCTCCACTGCTTACACCGTCACATCTTGGTTGGCCAGTTAC
GTCGAACCTATCTTCTCGGTTTGCTATGCTTCTGAATGGAAGACTACAGAAGGATTTGTCGCTAGAGTCATCCTACCAGCGCAAATAGTTGGCCAAGTTGGTTGTTGTCA
AATGGAGCGTATCCCATTGAACAGTAAAATAGAGAAAAAGATTCATCGGTGTTCTCGTTGCAAGGCTGTAGGGCACAATCGAAAGACATGTAAAGCTAGATTTATTGATA
ATGCATAG
Protein sequenceShow/hide protein sequence
MVRSSPRESYTLLAWYGEALEISNPGTQYDLETEPNVHFKYVYMAFGASIRCFLNYIRLVIAVDVAHYKGKFKGIMLVAMSIDANKQGQNIDPYTLCSTAYTVTSWLASY
VEPIFSVCYASEWKTTEGFVARVILPAQIVGQVGCCQMERIPLNSKIEKKIHRCSRCKAVGHNRKTCKARFIDNA