; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023889 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023889
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationchr01:2117577..2118901
RNA-Seq ExpressionPI0023889
SyntenyPI0023889
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]1.9e-9692.06Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS
          GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS GGGGGGGRYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRS
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]1.7e-9791.2Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG----GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRD
          GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY GGGGGG    GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRD
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG----GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRD

Query:  RSGPYERRGSGGFRSG
        RSGPYERRGSGGFRSG
Subjt:  RSGPYERRGSGGFRSG

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]1.6e-9287.68Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGP
           GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGG GRYGPDRNGDRFGGRNRS+GDRGGSGSDR++RDRSGP
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGP

Query:  YERRGSGGFRS
        YERR SGGFRS
Subjt:  YERRGSGGFRS

XP_022988948.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]2.4e-8886.05Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS
           GRDHDRDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG  GGG GRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRS
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERR--GSGGFRS
        GPYERR  GSGGFRS
Subjt:  GPYERR--GSGGFRS

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]2.9e-9792.06Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG--GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS
          GGRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG  GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG--GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein9.0e-9792.06Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS
          GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS GGGGGGGRYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRS
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-GGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

A0A1S3C164 glycine-rich RNA-binding protein RZ1A8.1e-9891.2Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG----GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRD
          GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY GGGGGG    GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRD
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG----GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRD

Query:  RSGPYERRGSGGFRSG
        RSGPYERRGSGGFRSG
Subjt:  RSGPYERRGSGGFRSG

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A7.9e-9387.68Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGP
           GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGG GRYGPDRNGDRFGGRNRS+GDRGGSGSDR++RDRSGP
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGP

Query:  YERRGSGGFRS
        YERR SGGFRS
Subjt:  YERRGSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like3.4e-8885.98Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG-GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
           GRD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG GRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRSG
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGG-GRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERR--GSGGFRS
        PYERR  GSGGFRS
Subjt:  PYERR--GSGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like1.2e-8886.05Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGF           AIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS
           GRDHDRDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG  GGG GRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRS
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG--GGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERR--GSGGFRS
        GPYERR  GSGGFRS
Subjt:  GPYERR--GSGGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A2.2e-2043.55Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGG
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGF           AI+ MNG DLDGRSITV++AQ ++GSG    G   RGGGG
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSG
        G  +    G  +GG  G   G                  GGR G Y G    YS  GGGGG YG    G R GG     G  GG G
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSG

P49311 Glycine-rich RNA-binding protein GRP2A2.2e-2046.51Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGG
        +VEYRCF+GGL+W+T +R L+ AF +FG LV++K++ D+ +GRSRGFGF           AI+ MNG DLDGRSITV++AQ ++GSG    G   RGGGG
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGG

Query:  GRDHDRDRGRDFGG-ARGSNSGDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGGGGGRYGPDRNG
        G       G   GG   G   G  +  G  G+ +R     GG GG Y  GGR D    GGG GG YG    G
Subjt:  GRDHDRDRGRDFGG-ARGSNSGDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGGGGGRYGPDRNG

Q43472 Glycine-rich RNA-binding protein blt8011.2e-2144.69Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAD VEYRCF+GGL W+T D+ L+ AF K+G ++++K++ D+ +GRSRGFGF           AI+AMNG DLDGR+ITV++AQ      R  DG    G
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRN
        GGGG          +GG R    G  +  G  G+         G GG YG RD    G GGGGG YG  R G   GG N
Subjt:  GGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRN

Q99070 Glycine-rich RNA-binding protein 22.7e-2141.54Show/hide
Query:  ADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGG
        A +VEYRCF+GGL+W+T++  L++AF  FG ++++KV+ D+ +GRSRGFGF           AI+ MNG +LDGR+ITV++AQ              RGG
Subjt:  ADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGG

Query:  GGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDD---KYSGG--GGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSD
        GGG           GG  G   G        G+  RE    GG GG YGGR +    Y GG  GGGGG YG    G  +GG     G+RG SG +
Subjt:  GGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDD---KYSGG--GGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSD

Q9LIN3 Glycine-rich RNA-binding protein RZ1A5.3e-5453.15Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF           AI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR  
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDK
          G  R +DRDR R  GG  G   GDCFKCGKPGHFARECPSE  R G                                            RY  +DD+
Subjt:  GGGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDK

Query:  YSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGF
        Y    GGG RYGPDR+G+R GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  YSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGF

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 21.8e-2043.39Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGG
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGF           AI+ MNG DLDGRSITV++AQ ++GSG    G   RGGGG
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR---GGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSG
        G  +    G  + G  GS  G                  GGR   GG Y G    YS  GGGGG YG    G R GG     G+ GG G
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR---GGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSG

AT2G21660.2 cold, circadian rhythm, and rna binding 28.5e-2345.68Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGGG
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGF           AI+ MNG DLDGRSITV++AQ    G G  H G    GGG
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGGG

Query:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGG
        GGR   R+ G  + G  G  S      G  G   RE     G GG  GG    Y G GGGGG
Subjt:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.8e-5553.15Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF           AI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR  
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDK
          G  R +DRDR R  GG  G   GDCFKCGKPGHFARECPSE  R G                                            RY  +DD+
Subjt:  GGGGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDK

Query:  YSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGF
        Y    GGG RYGPDR+G+R GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  YSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGF

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.8e-2042.33Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGG
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGF           AI+ MNG +LDGR ITV++AQ ++GSG         GGGG
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGR---YGPDRNGDRFGGRNRSTGDRGGSG
        G      RG   GG R    G     G  G+        GG GG Y  R   Y  GGGGGGR    G  R G  +GG +  +   GG G
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGR---YGPDRNGDRFGGRNRSTGDRGGSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.7e-1837.75Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA +   R F+GGLS   +DR L+ AF +FG +++ ++++++ +GRSRGFGF           +I+ M+G D   R I+V++A+P  G     D     G
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGF-----------AIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GGGGRDHDRD-RGR-DFGGARGS----NSGDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRY
          GGRD      G+  FGG  G        +CFKCG+ GH+AR+CPS  GGRGG  GG   + S  GG  GR     + DR+  R R   DR    +   
Subjt:  GGGGRDHDRD-RGR-DFGGARGS----NSGDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRY

Query:  SRDR
        +RDR
Subjt:  SRDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAAAAGTTTGGCCATCTTGTCGAGGCCAA
GGTAGTTGTTGACAAATTTTCTGGACGTTCCCGTGGTTTTGGATTTGCAATCAAAGCCATGAATGGAATGGATTTAGATGGCCGGAGCATTACAGTTGATAAGGCTCAAC
CAAACCAAGGTTCTGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTGGTGGTGGTCGTGATCATGATCGTGATCGAGGTCGTGATTTTGGCGGTGCACGTGGATCT
AACAGTGGAGATTGCTTTAAATGTGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTAGGTATGGAGGTAGGGATGACAAATATAGTGG
TGGTGGCGGCGGCGGTGGTCGATATGGTCCGGACCGAAATGGAGATAGATTTGGTGGGCGCAATAGGAGTACTGGTGATCGAGGAGGTTCGGGAAGTGATCGATATAGCC
GTGACCGCTCTGGTCCATATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAG
mRNA sequenceShow/hide mRNA sequence
TACGCCTTTCGTTCTTCACAAATTGTAAGCTCAATTCTGCTTCTAACCATTTTTCTCTCTTACTTTTATGTTTTTCTTTTTTCAATTTCCTATATAAGACTCTCGAATTT
CATTTCATATTTGCATAATTCCGTATTCTGCTTAATTGTGGTTTCTTTTTCTTTTCTTTTTCCTTTTTTTCAAATTCTTCGGATCCAGAAAGTTTTCAGTATTTTCTCCT
GTTTAAATCTCTTCAATTTCAACGAGTTTTTTGCGCTCTCATAATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTC
TGAAAGAGGCGTTTGAAAAGTTTGGCCATCTTGTCGAGGCCAAGGTAGTTGTTGACAAATTTTCTGGACGTTCCCGTGGTTTTGGATTTGCAATCAAAGCCATGAATGGA
ATGGATTTAGATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCTGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTGGTGGTGGTCGTGATCA
TGATCGTGATCGAGGTCGTGATTTTGGCGGTGCACGTGGATCTAACAGTGGAGATTGCTTTAAATGTGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTG
GTAGAGGAGGTAGGTATGGAGGTAGGGATGACAAATATAGTGGTGGTGGCGGCGGCGGTGGTCGATATGGTCCGGACCGAAATGGAGATAGATTTGGTGGGCGCAATAGG
AGTACTGGTGATCGAGGAGGTTCGGGAAGTGATCGATATAGCCGTGACCGCTCTGGTCCATATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAG
Protein sequenceShow/hide protein sequence
MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGGGGRDHDRDRGRDFGGARGS
NSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGFRSG