CuGenDBv2

Gene ID	PI0023900
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	zinc finger CCCH domain-containing protein 40 isoform X1
Genome location	chr01:3145979..3152968
RNA-Seq Expression	PI0023900
Synteny	PI0023900
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000571 - Zinc finger, CCCH-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144583.2 zinc finger CCCH domain-containing protein 40 isoform X1 [Cucumis sativus]

1.4e-210

90.6

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA
        MMVGRKLFKTKLCVLYQKG+CSRPSCSFAHGNAELRRFAA S GR EYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSL+RHSDRKRRKKEHGDA
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA

Query:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
         RDYSGNLRI DRNE HDR GKISSVSRDTLEGQLNK+QTDIEMAEQ KHQAEVY+DEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
Subjt:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR
        HSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDGEDP             DTSASKRK+H VQDIAEN KR+DL+KGNKEAVGRLRRNSR
Subjt:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR

Query:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
        WNAHPAKS YSKI+ VGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRE+SMEAASGSLPFLPP
Subjt:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA
        PPPPPIREFSHS+YEGEDQNVDVEVVD+E+E  DEA
Subjt:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

XP_008455411.1 PREDICTED: zinc finger CCCH domain-containing protein 40 isoform X1 [Cucumis melo]

1.2e-214

91.97

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAAS GR EYRGNDLRHKLDSRHSP QERDSRGRHVPREYSSSWSL+RHSDRKRRKKEHGDA
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA

Query:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
        CRDYSGNLRISDRNE HDR GKISSVSRDTLEGQLNKMQTDIEMAEQ KHQAEVYLDEKIQEVDSL SRVQELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR
        HSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++P             DTSASKRK+HAVQDIAENSKR+DLNKGNKEAVGRLRRNSR
Subjt:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR

Query:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
        WNAHPAKS YSKIE VGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
Subjt:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA
        PPPPPIREFSHS+YEGEDQNVDVEVVDDE+E  D+A
Subjt:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

XP_008455412.1 PREDICTED: zinc finger CCCH domain-containing protein 40 isoform X2 [Cucumis melo]

1.9e-212

91.51

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAAS GR EYRGNDLRHKLDSRHSP QERDSRGRHVP +YSSSWSL+RHSDRKRRKKEHGDA
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA

Query:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
        CRDYSGNLRISDRNE HDR GKISSVSRDTLEGQLNKMQTDIEMAEQ KHQAEVYLDEKIQEVDSL SRVQELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR
        HSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++P             DTSASKRK+HAVQDIAENSKR+DLNKGNKEAVGRLRRNSR
Subjt:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR

Query:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
        WNAHPAKS YSKIE VGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
Subjt:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA
        PPPPPIREFSHS+YEGEDQNVDVEVVDDE+E  D+A
Subjt:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

XP_008455414.1 PREDICTED: zinc finger CCCH domain-containing protein 40 isoform X4 [Cucumis melo]

6.7e-205

91.85

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAAS GR EYRGNDLRHKLDSRHSP QERDSRGRHVPREYSSSWSL+RHSDRKRRKKEHGDA
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA

Query:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
        CRDYSGNLRISDRNE HDR GKISSVSRDTLEGQLNKMQTDIEMAEQ KHQAEVYLDEKIQEVDSL SRVQELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR
        HSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++P             DTSASKRK+HAVQDIAENSKR+DLNKGNKEAVGRLRRNSR
Subjt:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR

Query:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
        WNAHPAKS YSKIE VGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
Subjt:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGE
        PPPPPIREFSHS+ E +
Subjt:  PPPPPIREFSHSRYEGE

XP_031744669.1 zinc finger CCCH domain-containing protein 40 isoform X3 [Cucumis sativus]

1.1e-207

90.14

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Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA
        MMVGRKLFKTKLCVLYQKG+CSRPSCSFAHGNAELRRFAA S GR EYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSL+RHSDRKRRKKEHGDA
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA

Query:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
         RDYSGNLRI DRNE HDR GKISSVSRDTLEGQLNK+QTDIEMAEQ KHQAEVY+DEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
Subjt:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR
        HSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDGEDP             DTSASKRK+H VQDIAEN KR   +KGNKEAVGRLRRNSR
Subjt:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR

Query:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
        WNAHPAKS YSKI+ VGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRE+SMEAASGSLPFLPP
Subjt:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA
        PPPPPIREFSHS+YEGEDQNVDVEVVD+E+E  DEA
Subjt:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C0E8 zinc finger CCCH domain-containing protein 40 isoform X1

5.9e-215

91.97

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAAS GR EYRGNDLRHKLDSRHSP QERDSRGRHVPREYSSSWSL+RHSDRKRRKKEHGDA
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA

Query:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
        CRDYSGNLRISDRNE HDR GKISSVSRDTLEGQLNKMQTDIEMAEQ KHQAEVYLDEKIQEVDSL SRVQELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR
        HSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++P             DTSASKRK+HAVQDIAENSKR+DLNKGNKEAVGRLRRNSR
Subjt:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR

Query:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
        WNAHPAKS YSKIE VGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
Subjt:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA
        PPPPPIREFSHS+YEGEDQNVDVEVVDDE+E  D+A
Subjt:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

A0A1S3C0V1 zinc finger CCCH domain-containing protein 13 isoform X3

2.5e-189

91.35

Show/hide

Query:  GRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIE
        GR EYRGNDLRHKLDSRHSP QERDSRGRHVPREYSSSWSL+RHSDRKRRKKEHGDACRDYSGNLRISDRNE HDR GKISSVSRDTLEGQLNKMQTDIE
Subjt:  GRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIE

Query:  MAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSD
        MAEQ KHQAEVYLDEKIQEVDSL SRVQELESQLY ERQECRRIKSKIKKFVKAHNRHSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSD
Subjt:  MAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSD

Query:  GEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSRWNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSS
        G++P             DTSASKRK+HAVQDIAENSKR+DLNKGNKEAVGRLRRNSRWNAHPAKS YSKIE VGNEINDLIPTANESRQRRGRTSSSVSS
Subjt:  GEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSRWNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSS

Query:  ADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA
        ADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHS+YEGEDQNVDVEVVDDE+E  D+A
Subjt:  ADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

A0A1S3C101 zinc finger CCCH domain-containing protein 40 isoform X2

9.4e-213

91.51

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAAS GR EYRGNDLRHKLDSRHSP QERDSRGRHVP +YSSSWSL+RHSDRKRRKKEHGDA
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA

Query:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
        CRDYSGNLRISDRNE HDR GKISSVSRDTLEGQLNKMQTDIEMAEQ KHQAEVYLDEKIQEVDSL SRVQELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR
        HSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++P             DTSASKRK+HAVQDIAENSKR+DLNKGNKEAVGRLRRNSR
Subjt:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR

Query:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
        WNAHPAKS YSKIE VGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
Subjt:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA
        PPPPPIREFSHS+YEGEDQNVDVEVVDDE+E  D+A
Subjt:  PPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

A0A1S3C1K7 zinc finger CCCH domain-containing protein 40 isoform X4

3.2e-205

91.85

Show/hide

Query:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA
        MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAAS GR EYRGNDLRHKLDSRHSP QERDSRGRHVPREYSSSWSL+RHSDRKRRKKEHGDA
Subjt:  MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDA

Query:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR
        CRDYSGNLRISDRNE HDR GKISSVSRDTLEGQLNKMQTDIEMAEQ KHQAEVYLDEKIQEVDSL SRVQELESQLY ERQECRRIKSKIKKFVKAHNR
Subjt:  CRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNR

Query:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR
        HSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSDG++P             DTSASKRK+HAVQDIAENSKR+DLNKGNKEAVGRLRRNSR
Subjt:  HSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSR

Query:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
        WNAHPAKS YSKIE VGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP
Subjt:  WNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGE
        PPPPPIREFSHS+ E +
Subjt:  PPPPPIREFSHSRYEGE

A0A5D3C6Y3 Zinc finger CCCH domain-containing protein 40 isoform X1

5.5e-189

91.09

Show/hide

Query:  GRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIE
        GR EYRGNDLRHKLDSRHSP QERDSRGRHVPREYSSSWSL+RHSDRKRRKKEHGDACRDYSGNLRISDRNE HDR GKISSVSRDTLEGQLNKMQTDIE
Subjt:  GRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIE

Query:  MAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSD
        MAE+ KHQAEVYLDEKIQEVDSL SRVQELESQLY ERQECRRIKSKIKKFVKAHNRHSRLQDEL RSQVRLQQLGDQLG DVNKIGANEEDSSINIVSD
Subjt:  MAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSD

Query:  GEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSRWNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSS
        G++P             DTSASKRK+HAVQDIAENSKR+DLNKGNKEAVGRLRRNSRWNAHPAKS YSKIE VGNEINDLIPTANESRQRRGRTSSSVSS
Subjt:  GEDP-------------DTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSRWNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSS

Query:  ADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA
        ADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHS+YEGEDQNVDVEVVDDE+E  D+A
Subjt:  ADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

SwissProt top hits

e value

%identity

Alignment

Q6H7U2 Zinc finger CCCH domain-containing protein 13

1.6e-44

33.96

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Query:  FKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAA------STGRQEYRGNDLRHKLDSRHSPLQE----RDSRG-------RHVPREYSSSWSL--DRHS
        +KTKLC L+Q+G+C+R +CSFAHG+ ++RR  ++        GR++YR  D R ++D R SP +     R+SRG       R   RE  SS+S    R S
Subjt:  FKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAA------STGRQEYRGNDLRHKLDSRHSPLQE----RDSRG-------RHVPREYSSSWSL--DRHS

Query:  DRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIK
        +R+  KK   D   + S +L +SD N+   +    S   ++  E QL +++ D+E     K Q EV LDEKI EV  ++S+V +LE QL +E+ EC R+ 
Subjt:  DRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIK

Query:  SKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPDTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSRW
        SK+KKF+KAH R  + Q+E+KRSQ R ++LGD L  D+ K GANEE SS+N   +   P+T+A+K++       +E +K   + K  +     + R+ ++
Subjt:  SKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPDTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSRW

Query:  NAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDE-EVDIDLEINHEEKEPRESSMEAASGSLPFLPP
         +      + K          L          + +  +++ + +KV+G      +P T MA HA+D+    I+LE  HE  +    +        P +P 
Subjt:  NAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDE-EVDIDLEINHEEKEPRESSMEAASGSLPFLPP

Query:  PPPPPIREFSHSRYEGEDQNVDVE
         PPP ++  ++ +YEG+D+ VDVE
Subjt:  PPPPPIREFSHSRYEGEDQNVDVE

Q93XW7 Zinc finger CCCH domain-containing protein 40

6.6e-46

36.47

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Query:  MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAAAS-TGRQEYRGNDLRHKLDSRHSPLQER-------------DSRGRHVPR--EYSSSWSL
        M G  ++KTKLC+L+ K G CSRP+C+FAHGNAELRR   +S TGR+    +DLR +  +  S L++R             D  GR V R   + +S   
Subjt:  MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAAAS-TGRQEYRGNDLRHKLDSRHSPLQER-------------DSRGRHVPR--EYSSSWSL

Query:  DRHSDRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVS-RDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQE
        +   D+  R+    D  RDY+G L++ +R E     G+       + LE QL  ++ D++M    K + E  ++ K  EVD LTSR+QELE+QL +E+ E
Subjt:  DRHSDRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVS-RDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQE

Query:  CRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGE----------DP-----DTSASKRKLHAVQDIAENSKR
        CRRI S  KKFVK +NR  R QD+LKRS+ RLQ+LG+QL   +     N  D  ++IVSD E          DP     +TS+  RK H V         
Subjt:  CRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGE----------DP-----DTSASKRKLHAVQDIAENSKR

Query:  SD--LNKGNKEAV-GRLRRNSRWNAHPAKSIYSKIETVGNEINDLI--PTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEI
         D  + +G +E V    +R   WN   +KS YS+ E+      D I   ++ E   +R R S   S+ DKV        +  TSMA    D+        
Subjt:  SD--LNKGNKEAV-GRLRRNSRWNAHPAKSIYSKIETVGNEINDLI--PTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEI

Query:  NHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDV
             E  E + EAA+GS P +  PPPPP R+ +H + + +D N DV
Subjt:  NHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDV

Arabidopsis top hits

e value

%identity

Alignment

AT3G21810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

4.7e-47

36.47

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Query:  MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAAAS-TGRQEYRGNDLRHKLDSRHSPLQER-------------DSRGRHVPR--EYSSSWSL
        M G  ++KTKLC+L+ K G CSRP+C+FAHGNAELRR   +S TGR+    +DLR +  +  S L++R             D  GR V R   + +S   
Subjt:  MVGRKLFKTKLCVLYQK-GHCSRPSCSFAHGNAELRRFAAAS-TGRQEYRGNDLRHKLDSRHSPLQER-------------DSRGRHVPR--EYSSSWSL

Query:  DRHSDRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVS-RDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQE
        +   D+  R+    D  RDY+G L++ +R E     G+       + LE QL  ++ D++M    K + E  ++ K  EVD LTSR+QELE+QL +E+ E
Subjt:  DRHSDRKRRKKEHGDACRDYSGNLRISDRNEGHDRHGKISSVS-RDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQE

Query:  CRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGE----------DP-----DTSASKRKLHAVQDIAENSKR
        CRRI S  KKFVK +NR  R QD+LKRS+ RLQ+LG+QL   +     N  D  ++IVSD E          DP     +TS+  RK H V         
Subjt:  CRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGE----------DP-----DTSASKRKLHAVQDIAENSKR

Query:  SD--LNKGNKEAV-GRLRRNSRWNAHPAKSIYSKIETVGNEINDLI--PTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEI
         D  + +G +E V    +R   WN   +KS YS+ E+      D I   ++ E   +R R S   S+ DKV        +  TSMA    D+        
Subjt:  SD--LNKGNKEAV-GRLRRNSRWNAHPAKSIYSKIETVGNEINDLI--PTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEI

Query:  NHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDV
             E  E + EAA+GS P +  PPPPP R+ +H + + +D N DV
Subjt:  NHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDV

Sequences

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CDS sequence

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ATGATGGTTGGCCGTAAACTCTTCAAAACAAAGTTATGTGTTCTTTATCAGAAAGGTCACTGTTCTCGCCCAAGTTGCTCCTTCGCTCACGGAAACGCTGAACTCAGGCG
ATTTGCTGCTGCTTCTACCGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGGCATTCTCCCCTACAGGAAAGGGATTCTAGAGGGCGACATG
TACCTCGTGAGTATAGCTCATCTTGGTCACTTGATCGGCATAGCGACCGTAAGAGAAGGAAAAAAGAACATGGGGATGCATGTCGTGATTATTCTGGAAATTTGAGGATT
TCAGATAGGAATGAAGGACATGATAGACACGGGAAAATCTCATCTGTTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGACAGATATTGAGATGGCTGAGCA
ACACAAACACCAAGCTGAGGTCTACCTGGACGAGAAAATTCAAGAAGTGGATAGTTTGACTTCTAGAGTTCAGGAACTAGAATCTCAATTATATAAAGAGAGGCAGGAGT
GTAGAAGGATCAAATCAAAAATCAAGAAGTTTGTCAAAGCACATAATCGTCACTCAAGGTTGCAAGATGAACTGAAACGGTCACAAGTCCGCCTGCAACAATTGGGGGAT
CAGCTGGGGCCAGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGACACTTCTGCAAGCAAGAGGAAGTTGCA
TGCTGTTCAAGATATTGCAGAGAACTCAAAAAGGTCTGATTTAAACAAAGGAAATAAAGAGGCAGTGGGCAGATTGAGAAGGAACTCTCGGTGGAATGCCCATCCTGCTA
AATCAATATATAGCAAAATTGAGACGGTTGGCAATGAAATCAATGATCTGATACCTACAGCAAATGAAAGCAGGCAAAGGAGGGGAAGGACATCTAGTAGTGTTTCTTCT
GCAGACAAGGTTAGGGGTCTAGATTCAGGTGTTGCAGTGCCATTAACCAGCATGGCTGGCCATGCAGTCGATGAGGAAGTTGATATTGACTTGGAAATCAACCATGAAGA
GAAAGAACCAAGGGAAAGTTCTATGGAGGCCGCATCTGGCAGCCTGCCTTTCCTTCCCCCTCCACCACCACCTCCAATTCGTGAATTCAGCCATTCAAGGTATGAGGGTG
AAGATCAAAATGTAGATGTGGAGGTGGTCGATGATGAAAGGGAAGGCACGGACGAGGCTTAG

mRNA sequence

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Protein sequence

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MMVGRKLFKTKLCVLYQKGHCSRPSCSFAHGNAELRRFAAASTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHVPREYSSSWSLDRHSDRKRRKKEHGDACRDYSGNLRI
SDRNEGHDRHGKISSVSRDTLEGQLNKMQTDIEMAEQHKHQAEVYLDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNRHSRLQDELKRSQVRLQQLGD
QLGPDVNKIGANEEDSSINIVSDGEDPDTSASKRKLHAVQDIAENSKRSDLNKGNKEAVGRLRRNSRWNAHPAKSIYSKIETVGNEINDLIPTANESRQRRGRTSSSVSS
ADKVRGLDSGVAVPLTSMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSRYEGEDQNVDVEVVDDEREGTDEA

PI0023900 (gene) of Melon (PI 482460) v1 genome