; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0023908 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023908
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibosome maturation factor
Genome locationchr04:32394409..32395711
RNA-Seq ExpressionPI0023908
SyntenyPI0023908
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136199.1 uncharacterized protein LOC101212292 isoform X2 [Cucumis sativus]1.7e-7696.23Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDEDPADDQKRKKHSPSSSSILNY GQDD K+SKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQL EIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_008466004.1 PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo]3.8e-7695.62Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDEDPADDQKRKKHSPSSSSILNY GQDD K+SKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSQQLAEIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_008466005.1 PREDICTED: uncharacterized protein LOC103503567 isoform X2 [Cucumis melo]2.7e-7495Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDEDPADDQKRKKHSPSSSSILNY GQDD K+SKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSQQL EIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_011652641.1 uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus]2.4e-7896.86Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDEDPADDQKRKKHSPSSSSILNY GQDD K+SKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_038888243.1 uncharacterized protein LOC120078100 [Benincasa hispida]3.6e-7190.68Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDE PADDQKRKKHSPSSSSI NYDGQDD +ASKSFRFSFPSP PPRQEK VHAIPILTIICFLILY  SH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSY--SLKSRPPRKLADF
        QFHGFKRP++QL EIKADGDELILPKKGNILAIQSFRNLKEIEKSY  SLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSY--SLKSRPPRKLADF
TrEMBL top hitse value%identityAlignment
A0A0A0LE94 Uncharacterized protein8.2e-7796.23Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDEDPADDQKRKKHSPSSSSILNY GQDD K+SKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQL EIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A1S3CQ78 uncharacterized protein LOC103503567 isoform X11.8e-7695.62Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDEDPADDQKRKKHSPSSSSILNY GQDD K+SKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSQQLAEIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A1S3CQJ2 uncharacterized protein LOC103503567 isoform X21.3e-7495Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDEDPADDQKRKKHSPSSSSILNY GQDD K+SKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSQQL EIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A5A7T6T2 Uncharacterized protein1.3e-7495Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSDEDPADDQKRKKHSPSSSSILNY GQDD K+SKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPSQQL EIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKRPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A6J1HI49 uncharacterized protein LOC111463852 isoform X11.5e-7088.05Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGH AGAKSD+ P  DQKRKKHSPSSSSI+ YDGQDD K SKSFRFSFPSPSPPRQE LVHAIPILT+ICFLILYI SH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKRPS+QLAEIKADGDELI+PK+GNI+AIQSFRNLKEIEKS SLKSR PRKLADF
Subjt:  QFHGFKRPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35470.1 unknown protein2.7e-2447.34Show/hide
Query:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSP-SSSSILNYDGQDDHKASKSFRFSFPSP---SPPRQEKLVHAIPILTIICFLILYIFSHSPSQ
        MQR SL S  SKLH +  G K D    DD K    SP SSSS ++YD  +          S  SP   +  +QEKLVH IPILT+ICF+ILY+ S++PSQ
Subjt:  MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSP-SSSSILNYDGQDDHKASKSFRFSFPSP---SPPRQEKLVHAIPILTIICFLILYIFSHSPSQ

Query:  SDLAQFHGFKRPSQQLAEIKADGDELILPKKGNILAIQ-SFRNLKEIEKSYSLKSRP-----PRKLADF
        SDLAQF+GF RPS+ L     +GDE+    + + L+I+ S RNL+E E S++ KS P      RK ADF
Subjt:  SDLAQFHGFKRPSQQLAEIKADGDELILPKKGNILAIQ-SFRNLKEIEKSYSLKSRP-----PRKLADF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGCAATCTCTAGGCTCACCAGTTTCCAAGCTCCACGGCCATGCCGCCGGAGCAAAGTCCGATGAAGATCCGGCTGACGATCAAAAGCGCAAGAAGCACTCTCC
ATCTTCATCCTCAATTCTCAACTACGACGGACAAGACGACCATAAAGCCTCTAAATCTTTCCGATTCTCATTTCCGTCGCCTTCTCCTCCTCGCCAAGAGAAGTTAGTTC
ACGCCATACCTATTCTCACCATTATCTGCTTCCTAATCCTTTATATCTTCTCGCACAGTCCTTCGCAGTCAGATTTGGCGCAGTTTCACGGATTCAAGCGTCCTTCACAA
CAATTAGCAGAAATCAAAGCCGATGGAGACGAACTTATTCTACCAAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTC
TCTTAAATCTCGCCCTCCGCGGAAACTCGCCGATTTCTAA
mRNA sequenceShow/hide mRNA sequence
GAGCAACATTGCTTCTCTCTCTACTTCTCTCTCTTTCTCTCTCTACCATGCAAAGGCAATCTCTAGGCTCACCAGTTTCCAAGCTCCACGGCCATGCCGCCGGAGCAAAG
TCCGATGAAGATCCGGCTGACGATCAAAAGCGCAAGAAGCACTCTCCATCTTCATCCTCAATTCTCAACTACGACGGACAAGACGACCATAAAGCCTCTAAATCTTTCCG
ATTCTCATTTCCGTCGCCTTCTCCTCCTCGCCAAGAGAAGTTAGTTCACGCCATACCTATTCTCACCATTATCTGCTTCCTAATCCTTTATATCTTCTCGCACAGTCCTT
CGCAGTCAGATTTGGCGCAGTTTCACGGATTCAAGCGTCCTTCACAACAATTAGCAGAAATCAAAGCCGATGGAGACGAACTTATTCTACCAAAGAAAGGCAACATTCTA
GCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTCTCTTAAATCTCGCCCTCCGCGGAAACTCGCCGATTTCTAAACTCTGCATTTCCGATTATCTGA
CCTTCCGGTAAACTCTCACGGACTTCGTTTTCGCCGTGCGGCTTCACTCGCCGGCGCGTGTGCATTCCATAACTATTTTTTTTTCATAAAGCTTCTGTACATCAAATAAT
CCGTCAGATTAAATTGTTTTTTATTCCTTTTTTTCTTTTGCTTTTATTTTTTTTGTTCGCCTCTGCATACGCCGGCGGCGCTTATGTAACTTCCGATGAGATACTCTCAA
TTTAATCTAAACAAAGAATGAGCATAGCTATTATCATTAGATCAGAAAGCAAAATCACTAATCGACGCGCCTCATTTTCGCCGGATATTGAGCGCGTGAAGTGCCGGCGC
CGGCGCGGCGTATATGGAAATGGAATCCAGCTGGAGTATATATATATTTATTGTTTATTTTTCGATTTTCCTAATCGGACCGTTACGGCATTGGGAGAAGGGCCAAGATG
CCAGCTGGAAAAATGCAGGAGTCGCTGATGGTATCAGGTTCTTTCTTTCTTGTATATTTATTCTTAGGCCCTCCATCTATTGCCTATTTATTTTATTAGCGCTTTCCTTT
TCATTTAATTTAACTTTAGACCCAAATGCGAATATATT
Protein sequenceShow/hide protein sequence
MQRQSLGSPVSKLHGHAAGAKSDEDPADDQKRKKHSPSSSSILNYDGQDDHKASKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKRPSQ
QLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF