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PI0023954 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0023954
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr12:1658127..1658791
RNA-Seq ExpressionPI0023954
SyntenyPI0023954
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572977.1 NF-X1-type zinc finger protein NFXL1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1675.36Show/hide
Query:  SNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQ----ISRSPLGISGRPIS
        +N   R +MEKI   FPVHSQVRKIKEESETIIDW PGQPEIRP  AAFR     ISRSPLGISGRPIS
Subjt:  SNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQ----ISRSPLGISGRPIS

KAG6584306.1 DEAD-box ATP-dependent RNA helicase 27, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2076.39Show/hide
Query:  NIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF----RQISRSPLGISGRPISVGDS
        N ++   MEKI  PFPVHSQVRKIKEESE IIDWRPGQPEI+PP AAF    RQISRSPLG+SGRPISVG+S
Subjt:  NIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF----RQISRSPLGISGRPISVGDS

KAG7012158.1 hypothetical protein SDJN02_24910, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-1976.71Show/hide
Query:  SNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQ----ISRSPLGISGRPISVGDS
        +N   R +MEKI   FPVHSQVRKIKEESETIIDW PGQPEIRP  AAFR     ISRSPLGISGRPISVGDS
Subjt:  SNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQ----ISRSPLGISGRPISVGDS

KGN64190.1 hypothetical protein Csa_013611, partial [Cucumis sativus]2.3e-2891.78Show/hide
Query:  MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS
        MEI S+IRE NSMEKIEAPFPVHSQVRKIKEES+T IDWRPGQPEIRPPTA+FRQISRSPLGISGRPISVGDS
Subjt:  MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS

TYJ99047.1 hypothetical protein E5676_scaffold248G002510 [Cucumis melo var. makuwa]1.6e-2993.15Show/hide
Query:  MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS
        MEIDS++RERNS EKIE PFPVHSQVRKIKEESETI+DWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS
Subjt:  MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS

TrEMBL top hitse value%identityAlignment
A0A0A0LQJ2 Uncharacterized protein1.1e-2891.78Show/hide
Query:  MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS
        MEI S+IRE NSMEKIEAPFPVHSQVRKIKEES+T IDWRPGQPEIRPPTA+FRQISRSPLGISGRPISVGDS
Subjt:  MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS

A0A314ZBL8 Uncharacterized protein6.5e-1375.44Show/hide
Query:  FPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF---RQISRSPLGISGRPISVGDS
        FPVHSQVRKIK+ESE IIDW PG+PE+RP        RQISRSPLGIS RPISVGDS
Subjt:  FPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAF---RQISRSPLGISGRPISVGDS

A0A5D3BIV4 Uncharacterized protein7.7e-3093.15Show/hide
Query:  MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS
        MEIDS++RERNS EKIE PFPVHSQVRKIKEESETI+DWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS
Subjt:  MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS

A0A6A4PFG9 Uncharacterized protein2.5e-1276.92Show/hide
Query:  VHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS
        +HSQVRKIK+ESE I+DW PGQPEIRP    FR+ISRSPLGISGR ISVG+S
Subjt:  VHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS

A0A7J7CKN6 Uncharacterized protein1.9e-1265.71Show/hide
Query:  RERNSMEKIEAPFPVHSQVRKIKEESE--TIIDWRPGQPEIRPPTAAF--RQISRSPLGISGRPISVGDS
        R  NS E  E+  PVHSQVRKIK+ESE   I+DW PGQPE+R        RQISRSPLG SGRPISVGDS
Subjt:  RERNSMEKIEAPFPVHSQVRKIKEESE--TIIDWRPGQPEIRPPTAAF--RQISRSPLGISGRPISVGDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67920.1 unknown protein1.1e-0450.94Show/hide
Query:  VHSQVRKIKEESETIIDWRPGQPEIRPPTAAF--RQISRSPLGISGRPISVGD
        +HSQV KIK+E E I      QPE+R   +    RQ SRSPLG+  R ISVG+
Subjt:  VHSQVRKIKEESETIIDWRPGQPEIRPPTAAF--RQISRSPLGISGRPISVGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGATTCCAATATCAGAGAGAGGAACAGTATGGAGAAGATCGAAGCTCCGTTTCCTGTTCATAGTCAGGTGAGGAAGATCAAAGAGGAATCAGAGACGATCAT
CGATTGGCGACCTGGACAACCGGAGATCAGACCGCCGACCGCCGCCTTCCGCCAGATCTCTCGCTCGCCGCTTGGAATCTCCGGCCGCCCTATTTCGGTGGGGGATTCGT
AG
mRNA sequenceShow/hide mRNA sequence
GGCCGGTTCTGTTCCGTTTCGTTTCGTATCGTATCGGTCAAAAGCAGTCGCCTAATTCAAAATCGGATTGCGCTTTTCCCATTTCCTCACCCAACTTCCATCTTCCCTCC
CTTCTTACGTCTCATTCTCTGTTATATAAATCCCCTCACCTTCTTAAACCTTTCTCCGTTCTACATCATTCCAACCGATTCTTCGATTTAGGGGTTTTTTATTTTATTTT
TTATTTCTGGGTTTCTTGAGATGGAGATCGATTCCAATATCAGAGAGAGGAACAGTATGGAGAAGATCGAAGCTCCGTTTCCTGTTCATAGTCAGGTGAGGAAGATCAAA
GAGGAATCAGAGACGATCATCGATTGGCGACCTGGACAACCGGAGATCAGACCGCCGACCGCCGCCTTCCGCCAGATCTCTCGCTCGCCGCTTGGAATCTCCGGCCGCCC
TATTTCGGTGGGGGATTCGTAGAAGGAGATTATTCCGGTAGAGATATTTTGGGGCTTATTTCGTCTCTCTTCTTCCTTCTAATATTACAGATTCAGATAGCCCTAGTTTA
TGTAAATATTGTTGTTTTTATTTTTAAATAGAGAGGATTTTGGGTTTTGGATTTTGAATTTTGTATATTACTTTTCTTTTTTCTATAATATATTATAATATAATATATTA
CTCAA
Protein sequenceShow/hide protein sequence
MEIDSNIRERNSMEKIEAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS